RNA–Protein interactions for RNA: ENST00000553927.1

RPGRIP1-204, Transcript of RPGR interacting protein 1, humanhuman

TSL 2

Gene RPGRIP1, Length 2,875 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-204ENST00000553927 NOB1Q9ULX3 412 aaKnown RBP8.4□□□□□ -1.07
RPGRIP1-204ENST00000553927 EIF4G3O43432 1585 aaKnown RBP8.39□□□□□ -1.07
RPGRIP1-204ENST00000553927 PLA2R1Q13018 1463 aa8.39□□□□□ -1.07
RPGRIP1-204ENST00000553927 PLB1Q6P1J6 1458 aa8.39□□□□□ -1.07
RPGRIP1-204ENST00000553927 ABCC2Q92887 1545 aa8.39□□□□□ -1.07
RPGRIP1-204ENST00000553927 SSH1Q8WYL5 1049 aa8.39□□□□□ -1.07
RPGRIP1-204ENST00000553927 CSPP1Q1MSJ5 1256 aa8.39□□□□□ -1.07
RPGRIP1-204ENST00000553927 NOL8Q76FK4 1167 aaKnown RBP8.39□□□□□ -1.07
RPGRIP1-204ENST00000553927 PDLIM2Q96JY6 352 aa8.39□□□□□ -1.07
RPGRIP1-204ENST00000553927 RUNDC1Q96C34 613 aa8.38□□□□□ -1.07
RPGRIP1-204ENST00000553927 TTC12Q9H892 705 aaPredicted RBP8.38□□□□□ -1.07
RPGRIP1-204ENST00000553927 CGNQ9P2M7 1197 aaKnown RBP8.38□□□□□ -1.07
RPGRIP1-204ENST00000553927 CCDC39Q9UFE4 941 aa8.38□□□□□ -1.07
RPGRIP1-204ENST00000553927 ADCY10Q96PN6 1610 aa8.38□□□□□ -1.07
RPGRIP1-204ENST00000553927 PTMSP20962 102 aa8.38□□□□□ -1.07
RPGRIP1-204ENST00000553927 KIAA2012Q0VF49 1180 aa8.38□□□□□ -1.07
RPGRIP1-204ENST00000553927 MTERF4Q7Z6M4 381 aaKnown RBP8.38□□□□□ -1.07
RPGRIP1-204ENST00000553927 MORC1Q86VD1 984 aa8.38□□□□□ -1.07
RPGRIP1-204ENST00000553927 CHD1LQ86WJ1 897 aa8.38□□□□□ -1.07
RPGRIP1-204ENST00000553927 NPM1P06748 294 aaKnown RBP eCLIP8.37□□□□□ -1.07
RPGRIP1-204ENST00000553927 U2AF1L5P0DN76 240 aaPredicted RBP8.37□□□□□ -1.07
RPGRIP1-204ENST00000553927 U2AF1Q01081 240 aaKnown RBP eCLIP8.37□□□□□ -1.07
RPGRIP1-204ENST00000553927 CFAP44Q96MT7 982 aa8.37□□□□□ -1.07
RPGRIP1-204ENST00000553927 NAP1L2Q9ULW6 460 aaPredicted RBP8.37□□□□□ -1.07
RPGRIP1-204ENST00000553927 KIF16BQ96L93 1317 aa8.37□□□□□ -1.07
RPGRIP1-204ENST00000553927 APBB1O00213 710 aa8.37□□□□□ -1.07
RPGRIP1-204ENST00000553927 U2AF2P26368 475 aaKnown RBP eCLIP8.37□□□□□ -1.07
RPGRIP1-204ENST00000553927 NUCB1Q02818 461 aa8.37□□□□□ -1.07
RPGRIP1-204ENST00000553927 HDAC1Q13547 482 aaPredicted RBP8.37□□□□□ -1.07
RPGRIP1-204ENST00000553927 CROCC2H7BZ55 1655 aa8.37□□□□□ -1.07
RPGRIP1-204ENST00000553927 ZMYM3Q14202 1370 aa8.36□□□□□ -1.07
RPGRIP1-204ENST00000553927 HS1BP3Q53T59 392 aa8.36□□□□□ -1.07
RPGRIP1-204ENST00000553927 UTP14CQ5TAP6 766 aaKnown RBP8.36□□□□□ -1.07
RPGRIP1-204ENST00000553927 MYRIPQ8NFW9 859 aa8.36□□□□□ -1.07
RPGRIP1-204ENST00000553927 GDPD2Q9HCC8 539 aa8.36□□□□□ -1.07
RPGRIP1-204ENST00000553927 ATF7IPQ6VMQ6 1270 aa8.36□□□□□ -1.07
RPGRIP1-204ENST00000553927 PAXIP1Q6ZW49 1069 aaPredicted RBP8.36□□□□□ -1.07
RPGRIP1-204ENST00000553927 DDX19BQ9UMR2 479 aa8.36□□□□□ -1.07
RPGRIP1-204ENST00000553927 MTHFSP49914 203 aa8.36□□□□□ -1.07
RPGRIP1-204ENST00000553927 CDCA8Q53HL2 280 aa8.36□□□□□ -1.07
RPGRIP1-204ENST00000553927 U2SURPO15042 1029 aaKnown RBP8.35□□□□□ -1.07
RPGRIP1-204ENST00000553927 LRSAM1Q6UWE0 723 aa8.35□□□□□ -1.07
RPGRIP1-204ENST00000553927 USP25Q9UHP3 1055 aa8.35□□□□□ -1.07
RPGRIP1-204ENST00000553927 IBTKQ9P2D0 1353 aaPredicted RBP8.35□□□□□ -1.07
RPGRIP1-204ENST00000553927 RAPGEF6Q8TEU7 1601 aa8.35□□□□□ -1.07
RPGRIP1-204ENST00000553927 PLEKHD1A6NEE1 506 aa8.35□□□□□ -1.07
RPGRIP1-204ENST00000553927 ZNF771Q7L3S4 317 aaPredicted RBP8.35□□□□□ -1.07
RPGRIP1-204ENST00000553927 BCL2L12Q9HB09 334 aa8.35□□□□□ -1.07
RPGRIP1-204ENST00000553927 PLXNC1O60486 1568 aa8.34□□□□□ -1.07
RPGRIP1-204ENST00000553927 ZDHHC9Q9Y397 364 aa8.34□□□□□ -1.07
RPGRIP1-204ENST00000553927 ABCC10Q5T3U5 1492 aa8.34□□□□□ -1.07
RPGRIP1-204ENST00000553927 PTPRGP23470 1445 aa8.34□□□□□ -1.07
RPGRIP1-204ENST00000553927 BMP2KLQ5H9B9 411 aa8.34□□□□□ -1.07
RPGRIP1-204ENST00000553927 ZBTB40Q9NUA8 1239 aa8.34□□□□□ -1.07
RPGRIP1-204ENST00000553927 TMEM51Q9NW97 253 aa8.34□□□□□ -1.07
RPGRIP1-204ENST00000553927 DISP1Q96F81 1524 aa8.34□□□□□ -1.08
RPGRIP1-204ENST00000553927 ITSN2Q9NZM3 1697 aa8.33□□□□□ -1.08
RPGRIP1-204ENST00000553927 ELL2O00472 640 aaPredicted RBP8.33□□□□□ -1.08
RPGRIP1-204ENST00000553927 WDR63Q8IWG1 891 aa8.33□□□□□ -1.08
RPGRIP1-204ENST00000553927 PDCL2Q8N4E4 241 aa8.33□□□□□ -1.08
RPGRIP1-204ENST00000553927 SLC12A5Q9H2X9 1139 aa8.33□□□□□ -1.08
RPGRIP1-204ENST00000553927 MYO5CQ9NQX4 1742 aa8.33□□□□□ -1.08
RPGRIP1-204ENST00000553927 DTNBO60941 627 aa8.33□□□□□ -1.08
RPGRIP1-204ENST00000553927 NOLC1Q14978 699 aaKnown RBP eCLIP8.33□□□□□ -1.08
RPGRIP1-204ENST00000553927 CFAP70Q5T0N1 1121 aa8.33□□□□□ -1.08
RPGRIP1-204ENST00000553927 KIF3AQ9Y496 699 aa8.33□□□□□ -1.08
RPGRIP1-204ENST00000553927 CDC42BPAQ5VT25 1732 aa8.33□□□□□ -1.08
RPGRIP1-204ENST00000553927 NUCB2P80303 420 aa8.32□□□□□ -1.08
RPGRIP1-204ENST00000553927 C16orf71Q8IYS4 520 aaPredicted RBP8.32□□□□□ -1.08
RPGRIP1-204ENST00000553927 ATAD2Q6PL18 1390 aa8.32□□□□□ -1.08
RPGRIP1-204ENST00000553927 GSPT1P15170 499 aaKnown RBP8.32□□□□□ -1.08
RPGRIP1-204ENST00000553927 TSPY26PQ9H489 355 aa8.32□□□□□ -1.08
RPGRIP1-204ENST00000553927 CCDC141Q6ZP82 1450 aa8.32□□□□□ -1.08
RPGRIP1-204ENST00000553927 SYNMO15061 1565 aa8.32□□□□□ -1.08
RPGRIP1-204ENST00000553927 KIAA0556O60303 1618 aa8.32□□□□□ -1.08
RPGRIP1-204ENST00000553927 SMARCA5O60264 1052 aaPredicted RBP8.32□□□□□ -1.08
RPGRIP1-204ENST00000553927 OTUD7AQ8TE49 926 aaPredicted RBP8.32□□□□□ -1.08
RPGRIP1-204ENST00000553927 GTPBP4Q9BZE4 634 aaKnown RBP8.32□□□□□ -1.08
RPGRIP1-204ENST00000553927 NSD3Q9BZ95 1437 aa8.31□□□□□ -1.08
RPGRIP1-204ENST00000553927 GADD45BO75293 160 aaPredicted RBP8.31□□□□□ -1.08
RPGRIP1-204ENST00000553927 CDC45O75419 566 aa8.31□□□□□ -1.08
RPGRIP1-204ENST00000553927 MCM5P33992 734 aa8.31□□□□□ -1.08
RPGRIP1-204ENST00000553927 CLEC17AQ6ZS10 378 aa8.31□□□□□ -1.08
RPGRIP1-204ENST00000553927 SPC24Q8NBT2 197 aa8.31□□□□□ -1.08
RPGRIP1-204ENST00000553927 ERCC6Q03468 1493 aa8.31□□□□□ -1.08
RPGRIP1-204ENST00000553927 LETM1O95202 739 aaPredicted RBP8.31□□□□□ -1.08
RPGRIP1-204ENST00000553927 CYP2E1P05181 493 aaPredicted RBP8.31□□□□□ -1.08
RPGRIP1-204ENST00000553927 RNF216Q9NWF9 866 aaPredicted RBP8.31□□□□□ -1.08
RPGRIP1-204ENST00000553927 RIOK3O14730 519 aaKnown RBP8.3□□□□□ -1.08
RPGRIP1-204ENST00000553927 KIF20AO95235 890 aa8.3□□□□□ -1.08
RPGRIP1-204ENST00000553927 ADCY5O95622 1261 aa8.3□□□□□ -1.08
RPGRIP1-204ENST00000553927 NAA30Q147X3 362 aaPredicted RBP8.3□□□□□ -1.08
RPGRIP1-204ENST00000553927 NGEFQ8N5V2 710 aa8.3□□□□□ -1.08
RPGRIP1-204ENST00000553927 TRERF1Q96PN7 1200 aa8.3□□□□□ -1.08
RPGRIP1-204ENST00000553927 MYOM1P52179 1685 aa8.3□□□□□ -1.08
RPGRIP1-204ENST00000553927 POLR3AO14802 1390 aaPredicted RBP8.3□□□□□ -1.08
RPGRIP1-204ENST00000553927 CDK11BP21127 795 aaKnown RBP8.3□□□□□ -1.08
RPGRIP1-204ENST00000553927 RABEP1Q15276 862 aa8.3□□□□□ -1.08
RPGRIP1-204ENST00000553927 PIBF1Q8WXW3 757 aa8.3□□□□□ -1.08
RPGRIP1-204ENST00000553927 CHMP4AQ9BY43 222 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms