RNA–Protein interactions for RNA: ENST00000553927.1

RPGRIP1-204, Transcript of RPGR interacting protein 1, humanhuman

TSL 2

Gene RPGRIP1, Length 2,875 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-204ENST00000553927 AEBP2Q6ZN18 517 aaPredicted RBP12.44□□□□□ -0.42
RPGRIP1-204ENST00000553927 NISCHQ9Y2I1 1504 aa12.32□□□□□ -0.44
RPGRIP1-204ENST00000553927 CHIC1Q5VXU3 224 aa12.2□□□□□ -0.46
RPGRIP1-204ENST00000553927 HRCP23327 699 aa11.57□□□□□ -0.56
RPGRIP1-204ENST00000553927 PPARGC1BQ86YN6 1023 aaKnown RBP11.55□□□□□ -0.56
RPGRIP1-204ENST00000553927 PCGF6Q9BYE7 350 aa11.43□□□□□ -0.58
RPGRIP1-204ENST00000553927 SHROOM4Q9ULL8 1493 aa11.41□□□□□ -0.58
RPGRIP1-204ENST00000553927 SUPT5HO00267 1087 aaKnown RBP11.39□□□□□ -0.59
RPGRIP1-204ENST00000553927 MYO15BQ96JP2 1530 aa11.23□□□□□ -0.61
RPGRIP1-204ENST00000553927 PELP1Q8IZL8 1130 aaKnown RBP11.17□□□□□ -0.62
RPGRIP1-204ENST00000553927 SCAF1Q9H7N4 1312 aaKnown RBP11.1□□□□□ -0.63
RPGRIP1-204ENST00000553927 SLC24A1O60721 1099 aa11.02□□□□□ -0.64
RPGRIP1-204ENST00000553927 LOC105371045A0A1W2PR82 267 aa10.99□□□□□ -0.65
RPGRIP1-204ENST00000553927 TRIM26Q12899 539 aaPredicted RBP10.86□□□□□ -0.67
RPGRIP1-204ENST00000553927 DCAF1Q9Y4B6 1507 aa10.8□□□□□ -0.68
RPGRIP1-204ENST00000553927 EHMT2Q96KQ7 1210 aa10.78□□□□□ -0.68
RPGRIP1-204ENST00000553927 PHF23Q9BUL5 403 aaPredicted RBP10.77□□□□□ -0.69
RPGRIP1-204ENST00000553927 NEUROD1Q13562 356 aa10.76□□□□□ -0.69
RPGRIP1-204ENST00000553927 GTF3C3Q9Y5Q9 886 aa10.73□□□□□ -0.69
RPGRIP1-204ENST00000553927 ACIN1Q9UKV3 1341 aaKnown RBP10.72□□□□□ -0.69
RPGRIP1-204ENST00000553927 ZEB1P37275 1124 aaPredicted RBP10.71□□□□□ -0.7
RPGRIP1-204ENST00000553927 CCDC180Q9P1Z9 1646 aa10.7□□□□□ -0.7
RPGRIP1-204ENST00000553927 MYT1Q01538 1121 aa10.69□□□□□ -0.7
RPGRIP1-204ENST00000553927 DCAF8L2P0C7V8 631 aa10.68□□□□□ -0.7
RPGRIP1-204ENST00000553927 FAM9AQ8IZU1 332 aaPredicted RBP10.6□□□□□ -0.71
RPGRIP1-204ENST00000553927 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.57□□□□□ -0.72
RPGRIP1-204ENST00000553927 YTHDC1Q96MU7 727 aaKnown RBP10.55□□□□□ -0.72
RPGRIP1-204ENST00000553927 PLPPR3Q6T4P5 718 aa10.55□□□□□ -0.72
RPGRIP1-204ENST00000553927 CENPBP07199 599 aaPredicted RBP10.54□□□□□ -0.72
RPGRIP1-204ENST00000553927 DIEXFQ68CQ4 756 aaKnown RBP10.51□□□□□ -0.73
RPGRIP1-204ENST00000553927 CCER1Q8TC90 406 aaPredicted RBP10.5□□□□□ -0.73
RPGRIP1-204ENST00000553927 ZCCHC6Q5VYS8 1495 aaKnown RBP10.48□□□□□ -0.73
RPGRIP1-204ENST00000553927 SENP3Q9H4L4 574 aaPredicted RBP10.48□□□□□ -0.73
RPGRIP1-204ENST00000553927 TTBK1Q5TCY1 1321 aaPredicted RBP10.46□□□□□ -0.73
RPGRIP1-204ENST00000553927 TRIM41Q8WV44 630 aa10.39□□□□□ -0.75
RPGRIP1-204ENST00000553927 BCL11AQ9H165 835 aa10.28□□□□□ -0.76
RPGRIP1-204ENST00000553927 MIER1Q8N108 512 aa10.27□□□□□ -0.77
RPGRIP1-204ENST00000553927 RTN4Q9NQC3 1192 aaKnown RBP10.26□□□□□ -0.77
RPGRIP1-204ENST00000553927 ZNF316A6NFI3 1004 aaPredicted RBP10.22□□□□□ -0.77
RPGRIP1-204ENST00000553927 ANP32EQ9BTT0 268 aa10.15□□□□□ -0.79
RPGRIP1-204ENST00000553927 CSRNP3Q8WYN3 585 aa10.14□□□□□ -0.79
RPGRIP1-204ENST00000553927 SUPT16HQ9Y5B9 1047 aaKnown RBP10.12□□□□□ -0.79
RPGRIP1-204ENST00000553927 TSHZ2Q9NRE2 1034 aa10.11□□□□□ -0.79
RPGRIP1-204ENST00000553927 BCANQ96GW7 911 aa10.08□□□□□ -0.8
RPGRIP1-204ENST00000553927 RB1CC1Q8TDY2 1594 aa10.08□□□□□ -0.8
RPGRIP1-204ENST00000553927 HNRNPUL2Q1KMD3 747 aaKnown RBP10.06□□□□□ -0.8
RPGRIP1-204ENST00000553927 RSF1Q96T23 1441 aaPredicted RBP10.04□□□□□ -0.8
RPGRIP1-204ENST00000553927 ABCC9O60706 1549 aa9.99□□□□□ -0.81
RPGRIP1-204ENST00000553927 KCNA4P22459 653 aa9.99□□□□□ -0.81
RPGRIP1-204ENST00000553927 KCNH8Q96L42 1107 aa9.93□□□□□ -0.82
RPGRIP1-204ENST00000553927 PRKCSHP14314 528 aaPredicted RBP9.92□□□□□ -0.82
RPGRIP1-204ENST00000553927 CEP162Q5TB80 1403 aa9.91□□□□□ -0.82
RPGRIP1-204ENST00000553927 ITGAEP38570 1179 aa9.91□□□□□ -0.82
RPGRIP1-204ENST00000553927 UBTFP17480 764 aaKnown RBP9.9□□□□□ -0.82
RPGRIP1-204ENST00000553927 FKBP8Q14318 412 aa9.89□□□□□ -0.83
RPGRIP1-204ENST00000553927 SCRIBQ14160 1630 aa9.89□□□□□ -0.83
RPGRIP1-204ENST00000553927 RANGAP1P46060 587 aaPredicted RBP9.88□□□□□ -0.83
RPGRIP1-204ENST00000553927 RBM19Q9Y4C8 960 aaKnown RBP9.86□□□□□ -0.83
RPGRIP1-204ENST00000553927 CLSPNQ9HAW4 1339 aa9.84□□□□□ -0.83
RPGRIP1-204ENST00000553927 WRNQ14191 1432 aaPredicted RBP eCLIP9.83□□□□□ -0.84
RPGRIP1-204ENST00000553927 MSH5O43196 834 aa9.82□□□□□ -0.84
RPGRIP1-204ENST00000553927 ABCC8Q09428 1581 aa9.79□□□□□ -0.84
RPGRIP1-204ENST00000553927 SOGA1O94964 1423 aa9.79□□□□□ -0.84
RPGRIP1-204ENST00000553927 CECR2Q9BXF3 1484 aa9.79□□□□□ -0.84
RPGRIP1-204ENST00000553927 CCDC88BA6NC98 1476 aa9.79□□□□□ -0.84
RPGRIP1-204ENST00000553927 ERICH6Q7L0X2 663 aa9.76□□□□□ -0.85
RPGRIP1-204ENST00000553927 FOXD1Q16676 465 aa9.75□□□□□ -0.85
RPGRIP1-204ENST00000553927 TRIM52Q96A61 297 aa9.75□□□□□ -0.85
RPGRIP1-204ENST00000553927 RUSC2Q8N2Y8 1516 aa9.74□□□□□ -0.85
RPGRIP1-204ENST00000553927 NEFLP07196 543 aa9.74□□□□□ -0.85
RPGRIP1-204ENST00000553927 MROH2BQ7Z745 1585 aa9.74□□□□□ -0.85
RPGRIP1-204ENST00000553927 TNIKQ9UKE5 1360 aa9.73□□□□□ -0.85
RPGRIP1-204ENST00000553927 IRX6P78412 446 aaPredicted RBP9.73□□□□□ -0.85
RPGRIP1-204ENST00000553927 WIZO95785 1651 aa9.72□□□□□ -0.85
RPGRIP1-204ENST00000553927 NCBP3Q53F19 620 aaKnown RBP9.72□□□□□ -0.85
RPGRIP1-204ENST00000553927 APLP2Q06481 763 aa9.71□□□□□ -0.85
RPGRIP1-204ENST00000553927 ANO8Q9HCE9 1232 aaPredicted RBP9.7□□□□□ -0.86
RPGRIP1-204ENST00000553927 DDX10Q13206 875 aaKnown RBP9.69□□□□□ -0.86
RPGRIP1-204ENST00000553927 HIRIP3Q9BW71 556 aaPredicted RBP9.69□□□□□ -0.86
RPGRIP1-204ENST00000553927 DAXXQ9UER7 740 aaPredicted RBP9.69□□□□□ -0.86
RPGRIP1-204ENST00000553927 DHX57Q6P158 1386 aaKnown RBP9.68□□□□□ -0.86
RPGRIP1-204ENST00000553927 DEKP35659 375 aaKnown RBP9.67□□□□□ -0.86
RPGRIP1-204ENST00000553927 NBR1Q14596 966 aa9.65□□□□□ -0.86
RPGRIP1-204ENST00000553927 AMER1Q5JTC6 1135 aaPredicted RBP9.64□□□□□ -0.87
RPGRIP1-204ENST00000553927 CCDC136Q96JN2 1154 aa9.63□□□□□ -0.87
RPGRIP1-204ENST00000553927 CLIP1P30622 1438 aa9.61□□□□□ -0.87
RPGRIP1-204ENST00000553927 GOLGA3Q08378 1498 aa9.61□□□□□ -0.87
RPGRIP1-204ENST00000553927 EIF4G1Q04637 1599 aaKnown RBP9.61□□□□□ -0.87
RPGRIP1-204ENST00000553927 SALL2Q9Y467 1007 aaPredicted RBP9.6□□□□□ -0.87
RPGRIP1-204ENST00000553927 CDK11AQ9UQ88 783 aaPredicted RBP9.59□□□□□ -0.87
RPGRIP1-204ENST00000553927 KANK4Q5T7N3 995 aaPredicted RBP9.57□□□□□ -0.88
RPGRIP1-204ENST00000553927 FANCIQ9NVI1 1328 aa9.56□□□□□ -0.88
RPGRIP1-204ENST00000553927 VPS8Q8N3P4 1428 aa9.56□□□□□ -0.88
RPGRIP1-204ENST00000553927 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.55□□□□□ -0.88
RPGRIP1-204ENST00000553927 SIN3AQ96ST3 1273 aa9.54□□□□□ -0.88
RPGRIP1-204ENST00000553927 BAZ1AQ9NRL2 1556 aaPredicted RBP9.53□□□□□ -0.88
RPGRIP1-204ENST00000553927 PAK3O75914 559 aaPredicted RBP9.53□□□□□ -0.88
RPGRIP1-204ENST00000553927 HNRNPUQ00839 825 aaKnown RBP eCLIP9.52□□□□□ -0.89
RPGRIP1-204ENST00000553927 TIMELESSQ9UNS1 1208 aa9.52□□□□□ -0.89
RPGRIP1-204ENST00000553927 ANP32CO43423 234 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms