RNA–Protein interactions for RNA: ENST00000546537.6

TMEM116-203, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-203ENST00000546537 NBPF8Q3BBV2 869 aa16.38■□□□□ 0.21
TMEM116-203ENST00000546537 NBPF14Q5TI25 921 aa16.38■□□□□ 0.21
TMEM116-203ENST00000546537 SPON1Q9HCB6 807 aa16.38■□□□□ 0.21
TMEM116-203ENST00000546537 PPP1R1BQ9UD71 204 aaPredicted RBP16.38■□□□□ 0.21
TMEM116-203ENST00000546537 ANKRD30BQ9BXX2 1392 aa16.38■□□□□ 0.21
TMEM116-203ENST00000546537 SPATA31A1Q5TZJ5 1347 aa16.37■□□□□ 0.21
TMEM116-203ENST00000546537 KCNQ2O43526 872 aa16.36■□□□□ 0.21
TMEM116-203ENST00000546537 PMFBP1Q8TBY8 1022 aa16.36■□□□□ 0.21
TMEM116-203ENST00000546537 ANKARQ7Z5J8 1434 aa16.36■□□□□ 0.21
TMEM116-203ENST00000546537 SPATA31E1Q6ZUB1 1445 aa16.35■□□□□ 0.21
TMEM116-203ENST00000546537 SLC4A1APQ9BWU0 796 aaKnown RBP16.34■□□□□ 0.21
TMEM116-203ENST00000546537 RGL3Q3MIN7 710 aa16.33■□□□□ 0.2
TMEM116-203ENST00000546537 ZNF784Q8NCA9 323 aaPredicted RBP16.33■□□□□ 0.2
TMEM116-203ENST00000546537 IFFO2Q5TF58 517 aa16.32■□□□□ 0.2
TMEM116-203ENST00000546537 PRDM11Q9NQV5 511 aa16.32■□□□□ 0.2
TMEM116-203ENST00000546537 GPRASP1Q5JY77 1395 aa16.31■□□□□ 0.2
TMEM116-203ENST00000546537 CASZ1Q86V15 1759 aa16.3■□□□□ 0.2
TMEM116-203ENST00000546537 PHRF1Q9P1Y6 1649 aaKnown RBP16.3■□□□□ 0.2
TMEM116-203ENST00000546537 DHX57Q6P158 1386 aaKnown RBP16.29■□□□□ 0.2
TMEM116-203ENST00000546537 ACIN1Q9UKV3 1341 aaKnown RBP16.29■□□□□ 0.2
TMEM116-203ENST00000546537 SENP3-EIF4A1A0A087X0R7 540 aa16.29■□□□□ 0.2
TMEM116-203ENST00000546537 PDE3BQ13370 1112 aa16.29■□□□□ 0.2
TMEM116-203ENST00000546537 SAFB2Q14151 953 aaKnown RBP eCLIP16.29■□□□□ 0.2
TMEM116-203ENST00000546537 PRAM1Q96QH2 718 aa16.29■□□□□ 0.2
TMEM116-203ENST00000546537 C14orf93Q9H972 538 aaKnown RBP16.29■□□□□ 0.2
TMEM116-203ENST00000546537 RGPD3A6NKT7 1758 aaPredicted RBP16.28■□□□□ 0.2
TMEM116-203ENST00000546537 RGPD4Q7Z3J3 1758 aa16.28■□□□□ 0.2
TMEM116-203ENST00000546537 UTRNP46939 3433 aa16.28■□□□□ 0.2
TMEM116-203ENST00000546537 CHD4Q14839 1912 aa16.28■□□□□ 0.2
TMEM116-203ENST00000546537 BARGINQ6ZT62 677 aa16.28■□□□□ 0.2
TMEM116-203ENST00000546537 NRKQ7Z2Y5 1582 aa16.28■□□□□ 0.2
TMEM116-203ENST00000546537 KIAA0232Q92628 1395 aa16.27■□□□□ 0.2
TMEM116-203ENST00000546537 STRN4Q9NRL3 753 aa16.27■□□□□ 0.2
TMEM116-203ENST00000546537 DLC1Q96QB1 1528 aa16.27■□□□□ 0.2
TMEM116-203ENST00000546537 MYOM1P52179 1685 aa16.25■□□□□ 0.19
TMEM116-203ENST00000546537 C1QTNF8P60827 252 aa16.25■□□□□ 0.19
TMEM116-203ENST00000546537 CHRNA2Q15822 529 aa16.25■□□□□ 0.19
TMEM116-203ENST00000546537 USP35Q9P2H5 1018 aa16.25■□□□□ 0.19
TMEM116-203ENST00000546537 TULP4Q9NRJ4 1543 aa16.24■□□□□ 0.19
TMEM116-203ENST00000546537 PRR36Q9H6K5 1346 aa16.24■□□□□ 0.19
TMEM116-203ENST00000546537 CFAP70Q5T0N1 1121 aa16.24■□□□□ 0.19
TMEM116-203ENST00000546537 SSH2Q76I76 1423 aa16.24■□□□□ 0.19
TMEM116-203ENST00000546537 PARP4Q9UKK3 1724 aaKnown RBP16.24■□□□□ 0.19
TMEM116-203ENST00000546537 SBF2Q86WG5 1849 aa16.24■□□□□ 0.19
TMEM116-203ENST00000546537 PAK3O75914 559 aaPredicted RBP16.23■□□□□ 0.19
TMEM116-203ENST00000546537 POGKQ9P215 609 aa16.23■□□□□ 0.19
TMEM116-203ENST00000546537 EIF3AQ14152 1382 aaKnown RBP16.23■□□□□ 0.19
TMEM116-203ENST00000546537 PEAK1Q9H792 1746 aa16.22■□□□□ 0.19
TMEM116-203ENST00000546537 PLSCR1O15162 318 aa16.21■□□□□ 0.19
TMEM116-203ENST00000546537 NGDNQ8NEJ9 315 aaKnown RBP16.21■□□□□ 0.19
TMEM116-203ENST00000546537 LMO7Q8WWI1 1683 aa16.21■□□□□ 0.18
TMEM116-203ENST00000546537 ITSN1Q15811 1721 aa16.2■□□□□ 0.18
TMEM116-203ENST00000546537 C11orf95C9JLR9 678 aaPredicted RBP16.2■□□□□ 0.18
TMEM116-203ENST00000546537 EVA1CP58658 441 aa16.2■□□□□ 0.18
TMEM116-203ENST00000546537 ZC3H6P61129 1189 aaKnown RBP16.2■□□□□ 0.18
TMEM116-203ENST00000546537 TCP11L2Q8N4U5 519 aa16.2■□□□□ 0.18
TMEM116-203ENST00000546537 HIRIP3Q9BW71 556 aaPredicted RBP16.2■□□□□ 0.18
TMEM116-203ENST00000546537 ANO8Q9HCE9 1232 aaPredicted RBP16.2■□□□□ 0.18
TMEM116-203ENST00000546537 ATP7BP35670 1465 aa16.19■□□□□ 0.18
TMEM116-203ENST00000546537 PTGER2P43116 358 aa16.19■□□□□ 0.18
TMEM116-203ENST00000546537 LARP1Q6PKG0 1096 aaKnown RBP16.19■□□□□ 0.18
TMEM116-203ENST00000546537 PPARGC1BQ86YN6 1023 aaKnown RBP16.19■□□□□ 0.18
TMEM116-203ENST00000546537 PDGFDQ9GZP0 370 aaPredicted RBP16.19■□□□□ 0.18
TMEM116-203ENST00000546537 THRAP3Q9Y2W1 955 aaKnown RBP16.18■□□□□ 0.18
TMEM116-203ENST00000546537 WASLO00401 505 aaPredicted RBP16.17■□□□□ 0.18
TMEM116-203ENST00000546537 OVOS2A0A0G2JMS6 1433 aa16.17■□□□□ 0.18
TMEM116-203ENST00000546537 OVOS2A0A0J9YW53 1432 aa16.17■□□□□ 0.18
TMEM116-203ENST00000546537 OVOS2Q6IE36 1432 aa16.17■□□□□ 0.18
TMEM116-203ENST00000546537 ADGRB1O14514 1584 aa16.17■□□□□ 0.18
TMEM116-203ENST00000546537 MINK1Q8N4C8 1332 aaPredicted RBP16.17■□□□□ 0.18
TMEM116-203ENST00000546537 ZBTB7AO95365 584 aa16.16■□□□□ 0.18
TMEM116-203ENST00000546537 SYT17Q9BSW7 474 aa16.16■□□□□ 0.18
TMEM116-203ENST00000546537 FHDC1Q9C0D6 1143 aaPredicted RBP16.15■□□□□ 0.18
TMEM116-203ENST00000546537 TRAK1Q9UPV9 953 aa16.14■□□□□ 0.17
TMEM116-203ENST00000546537 LRRC37A3O60309 1634 aa16.14■□□□□ 0.17
TMEM116-203ENST00000546537 CPDO75976 1380 aa16.13■□□□□ 0.17
TMEM116-203ENST00000546537 NUTM2GQ5VZR2 741 aa16.13■□□□□ 0.17
TMEM116-203ENST00000546537 PROM2Q8N271 834 aa16.13■□□□□ 0.17
TMEM116-203ENST00000546537 MPHOSPH9Q99550 1183 aa16.13■□□□□ 0.17
TMEM116-203ENST00000546537 ATF5Q9Y2D1 282 aaPredicted RBP16.13■□□□□ 0.17
TMEM116-203ENST00000546537 BCL11BQ9C0K0 894 aaPredicted RBP16.12■□□□□ 0.17
TMEM116-203ENST00000546537 COL5A2P05997 1499 aaPredicted RBP16.11■□□□□ 0.17
TMEM116-203ENST00000546537 PTF1AQ7RTS3 328 aa16.1■□□□□ 0.17
TMEM116-203ENST00000546537 SGIP1Q9BQI5 828 aa16.1■□□□□ 0.17
TMEM116-203ENST00000546537 TOPAZ1Q8N9V7 1692 aa16.1■□□□□ 0.17
TMEM116-203ENST00000546537 WNK3Q9BYP7 1800 aa16.1■□□□□ 0.17
TMEM116-203ENST00000546537 CRB1P82279 1406 aa16.1■□□□□ 0.17
TMEM116-203ENST00000546537 AKAP12Q02952 1782 aa16.09■□□□□ 0.17
TMEM116-203ENST00000546537 NUDT16Q96DE0 195 aaKnown RBP16.09■□□□□ 0.17
TMEM116-203ENST00000546537 MTFR1LQ9H019 292 aa16.09■□□□□ 0.17
TMEM116-203ENST00000546537 POLR3AO14802 1390 aaPredicted RBP16.09■□□□□ 0.17
TMEM116-203ENST00000546537 GIGYF1O75420 1035 aaPredicted RBP16.08■□□□□ 0.16
TMEM116-203ENST00000546537 SLC15A2Q16348 729 aa16.08■□□□□ 0.16
TMEM116-203ENST00000546537 STK32BQ9NY57 414 aa16.08■□□□□ 0.16
TMEM116-203ENST00000546537 USP19O94966 1318 aa16.08■□□□□ 0.16
TMEM116-203ENST00000546537 ARHGEF28Q8N1W1 1705 aaKnown RBP16.08■□□□□ 0.16
TMEM116-203ENST00000546537 DDB1Q16531 1140 aa16.07■□□□□ 0.16
TMEM116-203ENST00000546537 BCL9O00512 1426 aa16.07■□□□□ 0.16
TMEM116-203ENST00000546537 MAP3K5Q99683 1374 aa16.06■□□□□ 0.16
TMEM116-203ENST00000546537 ABTB2Q8N961 1025 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms