RNA–Protein interactions for RNA: ENST00000538957.1

SCNN1A-211, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 4

Gene SCNN1A, Length 566 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-211ENST00000538957 SPON1Q9HCB6 807 aa18.25■□□□□ 0.51
SCNN1A-211ENST00000538957 PRDM11Q9NQV5 511 aa18.25■□□□□ 0.51
SCNN1A-211ENST00000538957 PPARGC1BQ86YN6 1023 aaKnown RBP18.24■□□□□ 0.51
SCNN1A-211ENST00000538957 POGKQ9P215 609 aa18.24■□□□□ 0.51
SCNN1A-211ENST00000538957 DHX57Q6P158 1386 aaKnown RBP18.23■□□□□ 0.51
SCNN1A-211ENST00000538957 SIRT1Q96EB6 747 aa18.23■□□□□ 0.51
SCNN1A-211ENST00000538957 THSD7AQ9UPZ6 1657 aa18.22■□□□□ 0.51
SCNN1A-211ENST00000538957 PAK3O75914 559 aaPredicted RBP18.22■□□□□ 0.51
SCNN1A-211ENST00000538957 PDE3BQ13370 1112 aa18.22■□□□□ 0.51
SCNN1A-211ENST00000538957 STRN4Q9NRL3 753 aa18.21■□□□□ 0.51
SCNN1A-211ENST00000538957 PIK3C2GO75747 1445 aa18.21■□□□□ 0.51
SCNN1A-211ENST00000538957 ANKARQ7Z5J8 1434 aa18.21■□□□□ 0.51
SCNN1A-211ENST00000538957 NINLQ9Y2I6 1382 aa18.2■□□□□ 0.5
SCNN1A-211ENST00000538957 PRAM1Q96QH2 718 aa18.2■□□□□ 0.5
SCNN1A-211ENST00000538957 EIF3AQ14152 1382 aaKnown RBP18.19■□□□□ 0.5
SCNN1A-211ENST00000538957 PCGF6Q9BYE7 350 aa18.19■□□□□ 0.5
SCNN1A-211ENST00000538957 KCNQ2O43526 872 aa18.18■□□□□ 0.5
SCNN1A-211ENST00000538957 USP35Q9P2H5 1018 aa18.18■□□□□ 0.5
SCNN1A-211ENST00000538957 SPATA31A1Q5TZJ5 1347 aa18.18■□□□□ 0.5
SCNN1A-211ENST00000538957 EVA1CP58658 441 aa18.17■□□□□ 0.5
SCNN1A-211ENST00000538957 NGDNQ8NEJ9 315 aaKnown RBP18.17■□□□□ 0.5
SCNN1A-211ENST00000538957 RREB1Q92766 1687 aa18.17■□□□□ 0.5
SCNN1A-211ENST00000538957 TRPM3Q9HCF6 1732 aaPredicted RBP18.17■□□□□ 0.5
SCNN1A-211ENST00000538957 ALS2Q96Q42 1657 aa18.16■□□□□ 0.5
SCNN1A-211ENST00000538957 NUP188Q5SRE5 1749 aa18.16■□□□□ 0.5
SCNN1A-211ENST00000538957 ACIN1Q9UKV3 1341 aaKnown RBP18.15■□□□□ 0.5
SCNN1A-211ENST00000538957 SPATA31E1Q6ZUB1 1445 aa18.15■□□□□ 0.5
SCNN1A-211ENST00000538957 C14orf93Q9H972 538 aaKnown RBP18.14■□□□□ 0.49
SCNN1A-211ENST00000538957 SENP3-EIF4A1A0A087X0R7 540 aa18.13■□□□□ 0.49
SCNN1A-211ENST00000538957 CHRNA2Q15822 529 aa18.13■□□□□ 0.49
SCNN1A-211ENST00000538957 CFAP70Q5T0N1 1121 aa18.12■□□□□ 0.49
SCNN1A-211ENST00000538957 HIRIP3Q9BW71 556 aaPredicted RBP18.12■□□□□ 0.49
SCNN1A-211ENST00000538957 KIAA0232Q92628 1395 aa18.12■□□□□ 0.49
SCNN1A-211ENST00000538957 MINK1Q8N4C8 1332 aaPredicted RBP18.1■□□□□ 0.49
SCNN1A-211ENST00000538957 C11orf95C9JLR9 678 aaPredicted RBP18.1■□□□□ 0.49
SCNN1A-211ENST00000538957 ZC3H6P61129 1189 aaKnown RBP18.1■□□□□ 0.49
SCNN1A-211ENST00000538957 BARGINQ6ZT62 677 aa18.09■□□□□ 0.49
SCNN1A-211ENST00000538957 DLC1Q96QB1 1528 aa18.08■□□□□ 0.49
SCNN1A-211ENST00000538957 CRYBG1Q9Y4K1 1723 aa18.08■□□□□ 0.48
SCNN1A-211ENST00000538957 TULP4Q9NRJ4 1543 aa18.08■□□□□ 0.48
SCNN1A-211ENST00000538957 CAMTA1Q9Y6Y1 1673 aa18.07■□□□□ 0.48
SCNN1A-211ENST00000538957 TCP11L2Q8N4U5 519 aa18.07■□□□□ 0.48
SCNN1A-211ENST00000538957 ZNF784Q8NCA9 323 aaPredicted RBP18.07■□□□□ 0.48
SCNN1A-211ENST00000538957 SSH2Q76I76 1423 aa18.06■□□□□ 0.48
SCNN1A-211ENST00000538957 TRAK1Q9UPV9 953 aa18.06■□□□□ 0.48
SCNN1A-211ENST00000538957 NUTM2GQ5VZR2 741 aa18.05■□□□□ 0.48
SCNN1A-211ENST00000538957 PHRF1Q9P1Y6 1649 aaKnown RBP18.05■□□□□ 0.48
SCNN1A-211ENST00000538957 ATP7BP35670 1465 aa18.04■□□□□ 0.48
SCNN1A-211ENST00000538957 WASLO00401 505 aaPredicted RBP18.04■□□□□ 0.48
SCNN1A-211ENST00000538957 MPHOSPH9Q99550 1183 aa18.04■□□□□ 0.48
SCNN1A-211ENST00000538957 BCL11BQ9C0K0 894 aaPredicted RBP18.04■□□□□ 0.48
SCNN1A-211ENST00000538957 ITSN1Q15811 1721 aa18.03■□□□□ 0.48
SCNN1A-211ENST00000538957 PRR36Q9H6K5 1346 aa18.03■□□□□ 0.48
SCNN1A-211ENST00000538957 THRAP3Q9Y2W1 955 aaKnown RBP18.03■□□□□ 0.48
SCNN1A-211ENST00000538957 NRKQ7Z2Y5 1582 aa18.03■□□□□ 0.48
SCNN1A-211ENST00000538957 LARP1Q6PKG0 1096 aaKnown RBP18.02■□□□□ 0.48
SCNN1A-211ENST00000538957 OVOS2A0A0G2JMS6 1433 aa18.01■□□□□ 0.47
SCNN1A-211ENST00000538957 OVOS2A0A0J9YW53 1432 aa18.01■□□□□ 0.47
SCNN1A-211ENST00000538957 OVOS2Q6IE36 1432 aa18.01■□□□□ 0.47
SCNN1A-211ENST00000538957 ZBTB7AO95365 584 aa18■□□□□ 0.47
SCNN1A-211ENST00000538957 C1QTNF8P60827 252 aa17.99■□□□□ 0.47
SCNN1A-211ENST00000538957 IFFO2Q5TF58 517 aa17.99■□□□□ 0.47
SCNN1A-211ENST00000538957 ZBTB7CA1YPR0 619 aa17.98■□□□□ 0.47
SCNN1A-211ENST00000538957 RGPD3A6NKT7 1758 aaPredicted RBP17.98■□□□□ 0.47
SCNN1A-211ENST00000538957 RGPD4Q7Z3J3 1758 aa17.98■□□□□ 0.47
SCNN1A-211ENST00000538957 CHD4Q14839 1912 aa17.98■□□□□ 0.47
SCNN1A-211ENST00000538957 PLSCR1O15162 318 aa17.97■□□□□ 0.47
SCNN1A-211ENST00000538957 ABTB2Q8N961 1025 aa17.97■□□□□ 0.47
SCNN1A-211ENST00000538957 NUDT16Q96DE0 195 aaKnown RBP17.97■□□□□ 0.47
SCNN1A-211ENST00000538957 STK32BQ9NY57 414 aa17.97■□□□□ 0.47
SCNN1A-211ENST00000538957 ATF5Q9Y2D1 282 aaPredicted RBP17.97■□□□□ 0.47
SCNN1A-211ENST00000538957 PARP4Q9UKK3 1724 aaKnown RBP17.97■□□□□ 0.47
SCNN1A-211ENST00000538957 ANO8Q9HCE9 1232 aaPredicted RBP17.96■□□□□ 0.47
SCNN1A-211ENST00000538957 MYOM1P52179 1685 aa17.96■□□□□ 0.47
SCNN1A-211ENST00000538957 CASZ1Q86V15 1759 aa17.95■□□□□ 0.46
SCNN1A-211ENST00000538957 DDB1Q16531 1140 aa17.94■□□□□ 0.46
SCNN1A-211ENST00000538957 FHDC1Q9C0D6 1143 aaPredicted RBP17.93■□□□□ 0.46
SCNN1A-211ENST00000538957 CPDO75976 1380 aa17.92■□□□□ 0.46
SCNN1A-211ENST00000538957 ADGRB1O14514 1584 aa17.92■□□□□ 0.46
SCNN1A-211ENST00000538957 CRB1P82279 1406 aa17.92■□□□□ 0.46
SCNN1A-211ENST00000538957 NLRP13Q86W25 1043 aa17.92■□□□□ 0.46
SCNN1A-211ENST00000538957 SYT17Q9BSW7 474 aa17.92■□□□□ 0.46
SCNN1A-211ENST00000538957 KDM2AQ9Y2K7 1162 aa17.92■□□□□ 0.46
SCNN1A-211ENST00000538957 GIGYF1O75420 1035 aaPredicted RBP17.91■□□□□ 0.46
SCNN1A-211ENST00000538957 ACEP12821 1306 aa17.91■□□□□ 0.46
SCNN1A-211ENST00000538957 SBF2Q86WG5 1849 aa17.91■□□□□ 0.46
SCNN1A-211ENST00000538957 LMO7Q8WWI1 1683 aa17.9■□□□□ 0.46
SCNN1A-211ENST00000538957 TOM1L2Q6ZVM7 507 aa17.9■□□□□ 0.46
SCNN1A-211ENST00000538957 COL5A2P05997 1499 aaPredicted RBP17.89■□□□□ 0.45
SCNN1A-211ENST00000538957 PTGER2P43116 358 aa17.89■□□□□ 0.45
SCNN1A-211ENST00000538957 GPR162Q16538 588 aa17.89■□□□□ 0.45
SCNN1A-211ENST00000538957 PDGFDQ9GZP0 370 aaPredicted RBP17.89■□□□□ 0.45
SCNN1A-211ENST00000538957 MTFR1LQ9H019 292 aa17.89■□□□□ 0.45
SCNN1A-211ENST00000538957 GCP02774 474 aa17.88■□□□□ 0.45
SCNN1A-211ENST00000538957 CDK19Q9BWU1 502 aa17.88■□□□□ 0.45
SCNN1A-211ENST00000538957 LRRC37A3O60309 1634 aa17.87■□□□□ 0.45
SCNN1A-211ENST00000538957 PEAK1Q9H792 1746 aa17.87■□□□□ 0.45
SCNN1A-211ENST00000538957 SLC15A2Q16348 729 aa17.87■□□□□ 0.45
SCNN1A-211ENST00000538957 DCAF11Q8TEB1 546 aa17.87■□□□□ 0.45
SCNN1A-211ENST00000538957 CCDC61Q9Y6R9 512 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms