RNA–Protein interactions for RNA: ENST00000532227.1

GTF2H1-212, Transcript of general transcription factor IIH subunit 1, humanhuman

TSL 3

Gene GTF2H1, Length 770 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H1-212ENST00000532227 TOR4AQ9NXH8 423 aa13.59□□□□□ -0.23
GTF2H1-212ENST00000532227 PTCRAQ6ISU1 281 aaPredicted RBP13.58□□□□□ -0.24
GTF2H1-212ENST00000532227 CCNYL3P0C7X3 344 aa13.57□□□□□ -0.24
GTF2H1-212ENST00000532227 HRCP23327 699 aa13.57□□□□□ -0.24
GTF2H1-212ENST00000532227 PTPRNQ16849 979 aa13.57□□□□□ -0.24
GTF2H1-212ENST00000532227 MYSM1Q5VVJ2 828 aa13.57□□□□□ -0.24
GTF2H1-212ENST00000532227 ZBTB3Q9H5J0 574 aa13.57□□□□□ -0.24
GTF2H1-212ENST00000532227 TOP2AP11388 1531 aaKnown RBP13.57□□□□□ -0.24
GTF2H1-212ENST00000532227 TOPBP1Q92547 1522 aa13.57□□□□□ -0.24
GTF2H1-212ENST00000532227 EIF4G3O43432 1585 aaKnown RBP13.57□□□□□ -0.24
GTF2H1-212ENST00000532227 CSPP1Q1MSJ5 1256 aa13.56□□□□□ -0.24
GTF2H1-212ENST00000532227 DESI1Q6ICB0 168 aa13.56□□□□□ -0.24
GTF2H1-212ENST00000532227 SKOR1P84550 965 aa13.55□□□□□ -0.24
GTF2H1-212ENST00000532227 LIMD1Q9UGP4 676 aa13.55□□□□□ -0.24
GTF2H1-212ENST00000532227 AQRO60306 1485 aaKnown RBP eCLIP13.55□□□□□ -0.24
GTF2H1-212ENST00000532227 TTC24A2A3L6 582 aaPredicted RBP13.54□□□□□ -0.24
GTF2H1-212ENST00000532227 WNT7BP56706 349 aa13.54□□□□□ -0.24
GTF2H1-212ENST00000532227 PRPF38BQ5VTL8 546 aaKnown RBP13.54□□□□□ -0.24
GTF2H1-212ENST00000532227 MRGPRX2Q96LB1 330 aa13.54□□□□□ -0.24
GTF2H1-212ENST00000532227 EVA1BQ9NVM1 165 aa13.54□□□□□ -0.24
GTF2H1-212ENST00000532227 RC3H1Q5TC82 1133 aaKnown RBP13.53□□□□□ -0.24
GTF2H1-212ENST00000532227 CABLES1Q8TDN4 633 aa13.53□□□□□ -0.24
GTF2H1-212ENST00000532227 CHD1O14646 1710 aa13.53□□□□□ -0.24
GTF2H1-212ENST00000532227 CFAP99D6REC4 459 aa13.52□□□□□ -0.25
GTF2H1-212ENST00000532227 ABCC8Q09428 1581 aa13.52□□□□□ -0.25
GTF2H1-212ENST00000532227 SNIP1Q8TAD8 396 aaKnown RBP13.51□□□□□ -0.25
GTF2H1-212ENST00000532227 KCNH2Q12809 1159 aa13.5□□□□□ -0.25
GTF2H1-212ENST00000532227 GPBP1L1Q9HC44 474 aaPredicted RBP13.5□□□□□ -0.25
GTF2H1-212ENST00000532227 QPCTQ16769 361 aa13.49□□□□□ -0.25
GTF2H1-212ENST00000532227 TUSC1Q2TAM9 212 aa13.49□□□□□ -0.25
GTF2H1-212ENST00000532227 LYPD8Q6UX82 237 aa13.49□□□□□ -0.25
GTF2H1-212ENST00000532227 RSPH6AQ9H0K4 717 aa13.49□□□□□ -0.25
GTF2H1-212ENST00000532227 UNC93B1Q9H1C4 597 aa13.49□□□□□ -0.25
GTF2H1-212ENST00000532227 PRDM2Q13029 1718 aa13.49□□□□□ -0.25
GTF2H1-212ENST00000532227 NUTM2BA6NNL0 878 aaPredicted RBP13.48□□□□□ -0.25
GTF2H1-212ENST00000532227 NUTM2EB1AL46 878 aaPredicted RBP13.48□□□□□ -0.25
GTF2H1-212ENST00000532227 NUTM2DQ5VT03 806 aaPredicted RBP13.48□□□□□ -0.25
GTF2H1-212ENST00000532227 ZNF787Q6DD87 383 aa13.48□□□□□ -0.25
GTF2H1-212ENST00000532227 NUTM2AQ8IVF1 878 aaPredicted RBP13.48□□□□□ -0.25
GTF2H1-212ENST00000532227 KDM4CQ9H3R0 1056 aa13.48□□□□□ -0.25
GTF2H1-212ENST00000532227 ST8SIA5O15466 376 aa13.47□□□□□ -0.25
GTF2H1-212ENST00000532227 AVPP01185 164 aa13.47□□□□□ -0.25
GTF2H1-212ENST00000532227 CLK2P49760 499 aaKnown RBP13.47□□□□□ -0.25
GTF2H1-212ENST00000532227 AAASQ9NRG9 546 aa13.47□□□□□ -0.25
GTF2H1-212ENST00000532227 POLR3EQ9NVU0 708 aa13.47□□□□□ -0.25
GTF2H1-212ENST00000532227 LILRB3O75022 631 aa13.46□□□□□ -0.25
GTF2H1-212ENST00000532227 SMPD1P17405 629 aa13.46□□□□□ -0.25
GTF2H1-212ENST00000532227 DNMBPQ6XZF7 1577 aa13.45□□□□□ -0.26
GTF2H1-212ENST00000532227 CCDC88BA6NC98 1476 aa13.45□□□□□ -0.26
GTF2H1-212ENST00000532227 J3QL48 77 aa13.45□□□□□ -0.26
GTF2H1-212ENST00000532227 CTHP32929 405 aa13.45□□□□□ -0.26
GTF2H1-212ENST00000532227 SH3BP2P78314 561 aa13.45□□□□□ -0.26
GTF2H1-212ENST00000532227 TSC1Q92574 1164 aa13.45□□□□□ -0.26
GTF2H1-212ENST00000532227 TARBP1Q13395 1621 aaKnown RBP13.45□□□□□ -0.26
GTF2H1-212ENST00000532227 LINC01559Q495D7 138 aa13.44□□□□□ -0.26
GTF2H1-212ENST00000532227 EHBP1Q8NDI1 1231 aa13.44□□□□□ -0.26
GTF2H1-212ENST00000532227 BAP1Q92560 729 aa13.44□□□□□ -0.26
GTF2H1-212ENST00000532227 CRIPAKQ8N1N5 446 aa13.43□□□□□ -0.26
GTF2H1-212ENST00000532227 FAM117AQ9C073 453 aa13.42□□□□□ -0.26
GTF2H1-212ENST00000532227 CLASP1Q7Z460 1538 aa13.41□□□□□ -0.26
GTF2H1-212ENST00000532227 PER1O15534 1290 aaPredicted RBP13.41□□□□□ -0.26
GTF2H1-212ENST00000532227 RTL5Q5HYW3 569 aaPredicted RBP13.41□□□□□ -0.26
GTF2H1-212ENST00000532227 CHMP7Q8WUX9 453 aaPredicted RBP13.41□□□□□ -0.26
GTF2H1-212ENST00000532227 DDRGK1Q96HY6 314 aa13.41□□□□□ -0.26
GTF2H1-212ENST00000532227 TDRD9Q8NDG6 1382 aaKnown RBP13.41□□□□□ -0.26
GTF2H1-212ENST00000532227 AXIN1O15169 862 aa13.4□□□□□ -0.26
GTF2H1-212ENST00000532227 SIAH2O43255 324 aa13.4□□□□□ -0.26
GTF2H1-212ENST00000532227 F12P00748 615 aaPredicted RBP13.4□□□□□ -0.26
GTF2H1-212ENST00000532227 CTC1Q2NKJ3 1217 aa13.4□□□□□ -0.26
GTF2H1-212ENST00000532227 MAP10Q9P2G4 905 aa13.4□□□□□ -0.26
GTF2H1-212ENST00000532227 POLA1P09884 1462 aaPredicted RBP13.4□□□□□ -0.26
GTF2H1-212ENST00000532227 ZNF511Q8NB15 262 aa13.39□□□□□ -0.27
GTF2H1-212ENST00000532227 POTECB2RU33 542 aa13.38□□□□□ -0.27
GTF2H1-212ENST00000532227 ALDH1A1P00352 501 aa13.38□□□□□ -0.27
GTF2H1-212ENST00000532227 SMCPP49901 116 aaPredicted RBP13.38□□□□□ -0.27
GTF2H1-212ENST00000532227 SNAPC4Q5SXM2 1469 aa13.37□□□□□ -0.27
GTF2H1-212ENST00000532227 RAD54L2Q9Y4B4 1467 aa13.37□□□□□ -0.27
GTF2H1-212ENST00000532227 SKIV2LQ15477 1246 aaKnown RBP13.37□□□□□ -0.27
GTF2H1-212ENST00000532227 HELBQ8NG08 1087 aaPredicted RBP13.37□□□□□ -0.27
GTF2H1-212ENST00000532227 DACH1Q9UI36 760 aa13.37□□□□□ -0.27
GTF2H1-212ENST00000532227 SYNJ1O43426 1573 aa13.37□□□□□ -0.27
GTF2H1-212ENST00000532227 SH3D19Q5HYK7 790 aa13.36□□□□□ -0.27
GTF2H1-212ENST00000532227 HPS1Q92902 700 aa13.36□□□□□ -0.27
GTF2H1-212ENST00000532227 SOGA1O94964 1423 aa13.36□□□□□ -0.27
GTF2H1-212ENST00000532227 PLEKHG3A1L390 1219 aa13.34□□□□□ -0.27
GTF2H1-212ENST00000532227 ATP1B4Q9UN42 357 aaPredicted RBP13.34□□□□□ -0.27
GTF2H1-212ENST00000532227 GAPVD1Q14C86 1478 aa13.34□□□□□ -0.27
GTF2H1-212ENST00000532227 VARSP26640 1264 aaKnown RBP13.33□□□□□ -0.28
GTF2H1-212ENST00000532227 MAGI1Q96QZ7 1491 aaPredicted RBP13.32□□□□□ -0.28
GTF2H1-212ENST00000532227 PROCA1Q8NCQ7 364 aaPredicted RBP13.32□□□□□ -0.28
GTF2H1-212ENST00000532227 WASF2Q9Y6W5 498 aa13.3□□□□□ -0.28
GTF2H1-212ENST00000532227 CTDSPL2Q05D32 466 aa13.29□□□□□ -0.28
GTF2H1-212ENST00000532227 FOXJ1Q92949 421 aa13.29□□□□□ -0.28
GTF2H1-212ENST00000532227 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.29□□□□□ -0.28
GTF2H1-212ENST00000532227 TLL2Q9Y6L7 1015 aa13.29□□□□□ -0.28
GTF2H1-212ENST00000532227 SYNJ2O15056 1496 aa13.29□□□□□ -0.28
GTF2H1-212ENST00000532227 GRIN2BQ13224 1484 aa13.29□□□□□ -0.28
GTF2H1-212ENST00000532227 FBXO31Q5XUX0 539 aaPredicted RBP13.28□□□□□ -0.28
GTF2H1-212ENST00000532227 WDR97A6NE52 1622 aa13.28□□□□□ -0.28
GTF2H1-212ENST00000532227 NEUROD2Q15784 382 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms