RNA–Protein interactions for RNA: ENST00000532227.1

GTF2H1-212, Transcript of general transcription factor IIH subunit 1, humanhuman

TSL 3

Gene GTF2H1, Length 770 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H1-212ENST00000532227 AEBP2Q6ZN18 517 aaPredicted RBP36.3■■■■□ 3.4
GTF2H1-212ENST00000532227 CHIC1Q5VXU3 224 aa34.93■■■■□ 3.18
GTF2H1-212ENST00000532227 SENP3Q9H4L4 574 aaPredicted RBP30.89■■■□□ 2.54
GTF2H1-212ENST00000532227 PHF23Q9BUL5 403 aaPredicted RBP30.66■■■□□ 2.5
GTF2H1-212ENST00000532227 FOXD1Q16676 465 aa28.74■■■□□ 2.19
GTF2H1-212ENST00000532227 PLPPR3Q6T4P5 718 aa28.13■■■□□ 2.09
GTF2H1-212ENST00000532227 PPP6R1Q9UPN7 881 aa27.25■■□□□ 1.95
GTF2H1-212ENST00000532227 ADRA2BP18089 450 aa27.19■■□□□ 1.94
GTF2H1-212ENST00000532227 PIAS4Q8N2W9 510 aaPredicted RBP26.98■■□□□ 1.91
GTF2H1-212ENST00000532227 MSH5O43196 834 aa26.72■■□□□ 1.87
GTF2H1-212ENST00000532227 POTEDQ86YR6 584 aa25.27■■□□□ 1.64
GTF2H1-212ENST00000532227 SCAF1Q9H7N4 1312 aaKnown RBP24.87■■□□□ 1.57
GTF2H1-212ENST00000532227 MAPK8IP2Q13387 824 aaPredicted RBP24.84■■□□□ 1.57
GTF2H1-212ENST00000532227 PPP4R3CPQ6ZMV5 832 aa24.73■■□□□ 1.55
GTF2H1-212ENST00000532227 DMRT2Q9Y5R5 561 aa24.57■■□□□ 1.52
GTF2H1-212ENST00000532227 CNKSR2Q8WXI2 1034 aa24.15■■□□□ 1.46
GTF2H1-212ENST00000532227 NCBP3Q53F19 620 aaKnown RBP23.92■■□□□ 1.42
GTF2H1-212ENST00000532227 HOXD11P31277 338 aaPredicted RBP23.85■■□□□ 1.41
GTF2H1-212ENST00000532227 RNF216Q9NWF9 866 aaPredicted RBP23.81■■□□□ 1.4
GTF2H1-212ENST00000532227 DCAF8L1A6NGE4 600 aa23.58■■□□□ 1.37
GTF2H1-212ENST00000532227 NPM3O75607 178 aaKnown RBP23.57■■□□□ 1.36
GTF2H1-212ENST00000532227 KCNA4P22459 653 aa23.55■■□□□ 1.36
GTF2H1-212ENST00000532227 DNAJC5BQ9UF47 199 aa22.93■■□□□ 1.26
GTF2H1-212ENST00000532227 RNF39Q9H2S5 420 aa22.83■■□□□ 1.25
GTF2H1-212ENST00000532227 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.75■■□□□ 1.23
GTF2H1-212ENST00000532227 CACNB1Q02641 598 aaPredicted RBP22.66■■□□□ 1.22
GTF2H1-212ENST00000532227 C1QBPQ07021 282 aaKnown RBP22.54■■□□□ 1.2
GTF2H1-212ENST00000532227 SLC4A2P04920 1241 aa22.38■■□□□ 1.17
GTF2H1-212ENST00000532227 SLC4A1APQ9BWU0 796 aaKnown RBP22.32■■□□□ 1.16
GTF2H1-212ENST00000532227 U3KPZ7 1027 aaPredicted RBP22.31■■□□□ 1.16
GTF2H1-212ENST00000532227 SPINK5Q9NQ38 1064 aaPredicted RBP21.86■■□□□ 1.09
GTF2H1-212ENST00000532227 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.85■■□□□ 1.09
GTF2H1-212ENST00000532227 HNRNPUL2Q1KMD3 747 aaKnown RBP21.85■■□□□ 1.09
GTF2H1-212ENST00000532227 FOXD4L1Q9NU39 408 aa21.82■■□□□ 1.08
GTF2H1-212ENST00000532227 CAPN15O75808 1086 aa21.81■■□□□ 1.08
GTF2H1-212ENST00000532227 MYCNP04198 464 aaPredicted RBP21.79■■□□□ 1.08
GTF2H1-212ENST00000532227 APLP2Q06481 763 aa21.74■■□□□ 1.07
GTF2H1-212ENST00000532227 SAMD1Q6SPF0 538 aaPredicted RBP21.74■■□□□ 1.07
GTF2H1-212ENST00000532227 ZBTB22O15209 634 aa21.64■■□□□ 1.05
GTF2H1-212ENST00000532227 TRHP20396 242 aaPredicted RBP21.58■■□□□ 1.05
GTF2H1-212ENST00000532227 DSG3P32926 999 aa21.55■■□□□ 1.04
GTF2H1-212ENST00000532227 ZNF219Q9P2Y4 722 aaPredicted RBP21.54■■□□□ 1.04
GTF2H1-212ENST00000532227 ABCB7O75027 752 aa21.34■■□□□ 1.01
GTF2H1-212ENST00000532227 ATF5Q9Y2D1 282 aaPredicted RBP21.26■□□□□ 0.99
GTF2H1-212ENST00000532227 POLA2Q14181 598 aa21.1■□□□□ 0.97
GTF2H1-212ENST00000532227 ATXN8OSP0DMR3 200 aa21.09■□□□□ 0.97
GTF2H1-212ENST00000532227 CSRNP3Q8WYN3 585 aa21.09■□□□□ 0.97
GTF2H1-212ENST00000532227 EHMT2Q96KQ7 1210 aa21.08■□□□□ 0.97
GTF2H1-212ENST00000532227 ZBTB12Q9Y330 459 aaPredicted RBP20.69■□□□□ 0.9
GTF2H1-212ENST00000532227 RBM42Q9BTD8 480 aaKnown RBP20.55■□□□□ 0.88
GTF2H1-212ENST00000532227 FBLN2P98095 1184 aa20.4■□□□□ 0.86
GTF2H1-212ENST00000532227 OSCARQ8IYS5 282 aa20.4■□□□□ 0.86
GTF2H1-212ENST00000532227 MKRN4PQ13434 485 aaPredicted RBP20.29■□□□□ 0.84
GTF2H1-212ENST00000532227 AKT1S1Q96B36 256 aa20.18■□□□□ 0.82
GTF2H1-212ENST00000532227 SPDYE2BA6NHP3 402 aa20.09■□□□□ 0.81
GTF2H1-212ENST00000532227 SPDYE6P0CI01 402 aa20.09■□□□□ 0.81
GTF2H1-212ENST00000532227 SPDYE2Q495Y8 402 aa20.09■□□□□ 0.81
GTF2H1-212ENST00000532227 REM2Q8IYK8 340 aaPredicted RBP19.99■□□□□ 0.79
GTF2H1-212ENST00000532227 ZNF692Q9BU19 519 aaPredicted RBP19.95■□□□□ 0.78
GTF2H1-212ENST00000532227 POTEHQ6S545 545 aa19.91■□□□□ 0.78
GTF2H1-212ENST00000532227 CHRDL2Q6WN34 429 aa19.91■□□□□ 0.78
GTF2H1-212ENST00000532227 SSUH2Q9Y2M2 353 aa19.87■□□□□ 0.77
GTF2H1-212ENST00000532227 PITPNM1O00562 1244 aa19.77■□□□□ 0.76
GTF2H1-212ENST00000532227 PABPN1Q86U42 306 aaKnown RBP eCLIP19.67■□□□□ 0.74
GTF2H1-212ENST00000532227 SPDYE1Q8NFV5 336 aaPredicted RBP19.64■□□□□ 0.73
GTF2H1-212ENST00000532227 CLEC11AQ9Y240 323 aa19.6■□□□□ 0.73
GTF2H1-212ENST00000532227 SPDYE4A6NLX3 237 aa19.59■□□□□ 0.73
GTF2H1-212ENST00000532227 PIP4P2Q8N4L2 257 aa19.54■□□□□ 0.72
GTF2H1-212ENST00000532227 FXR2P51116 673 aaKnown RBP eCLIP19.5■□□□□ 0.71
GTF2H1-212ENST00000532227 PRR29P0C7W0 189 aa19.34■□□□□ 0.69
GTF2H1-212ENST00000532227 PRKAR2AP13861 404 aaKnown RBP19.27■□□□□ 0.68
GTF2H1-212ENST00000532227 STAG3Q9UJ98 1225 aa19.23■□□□□ 0.67
GTF2H1-212ENST00000532227 CHADLQ6NUI6 762 aa19.17■□□□□ 0.66
GTF2H1-212ENST00000532227 PROM2Q8N271 834 aa19.16■□□□□ 0.66
GTF2H1-212ENST00000532227 FKBP8Q14318 412 aa19.11■□□□□ 0.65
GTF2H1-212ENST00000532227 HAX1O00165 279 aa19.08■□□□□ 0.64
GTF2H1-212ENST00000532227 CREBZFQ9NS37 354 aa18.95■□□□□ 0.62
GTF2H1-212ENST00000532227 FARP1Q9Y4F1 1045 aaPredicted RBP18.92■□□□□ 0.62
GTF2H1-212ENST00000532227 SP7Q8TDD2 431 aaPredicted RBP18.88■□□□□ 0.61
GTF2H1-212ENST00000532227 EVX2Q03828 476 aa18.87■□□□□ 0.61
GTF2H1-212ENST00000532227 C19orf67A6NJJ6 358 aa18.85■□□□□ 0.61
GTF2H1-212ENST00000532227 CD44P16070 742 aaKnown RBP18.69■□□□□ 0.58
GTF2H1-212ENST00000532227 MNX1P50219 401 aaPredicted RBP18.69■□□□□ 0.58
GTF2H1-212ENST00000532227 MIER1Q8N108 512 aa18.65■□□□□ 0.58
GTF2H1-212ENST00000532227 NPM1P06748 294 aaKnown RBP eCLIP18.63■□□□□ 0.57
GTF2H1-212ENST00000532227 PLEKHG5O94827 1062 aa18.6■□□□□ 0.57
GTF2H1-212ENST00000532227 FBXO3Q9UK99 471 aa18.57■□□□□ 0.56
GTF2H1-212ENST00000532227 PLCD3Q8N3E9 789 aa18.56■□□□□ 0.56
GTF2H1-212ENST00000532227 ZRANB1Q9UGI0 708 aa18.51■□□□□ 0.55
GTF2H1-212ENST00000532227 GABBR2O75899 941 aa18.47■□□□□ 0.55
GTF2H1-212ENST00000532227 PAK3O75914 559 aaPredicted RBP18.46■□□□□ 0.55
GTF2H1-212ENST00000532227 ZNF579Q8NAF0 562 aaKnown RBP18.41■□□□□ 0.54
GTF2H1-212ENST00000532227 ZBTB47Q9UFB7 747 aaPredicted RBP18.38■□□□□ 0.53
GTF2H1-212ENST00000532227 CLCN6P51797 869 aa18.33■□□□□ 0.52
GTF2H1-212ENST00000532227 VASPP50552 380 aaPredicted RBP18.32■□□□□ 0.52
GTF2H1-212ENST00000532227 TSPYL2Q9H2G4 693 aaPredicted RBP18.32■□□□□ 0.52
GTF2H1-212ENST00000532227 PHF12Q96QT6 1004 aa18.28■□□□□ 0.52
GTF2H1-212ENST00000532227 RASEFQ8IZ41 740 aa18.26■□□□□ 0.51
GTF2H1-212ENST00000532227 NUBP1P53384 320 aa18.21■□□□□ 0.51
GTF2H1-212ENST00000532227 CCDC61Q9Y6R9 512 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms