RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 ANKARQ7Z5J8 1434 aa15.58■□□□□ 0.08
CPSF1-203ENST00000527916 DCAF8L1A6NGE4 600 aa15.57■□□□□ 0.08
CPSF1-203ENST00000527916 CAMKK2Q96RR4 588 aa15.57■□□□□ 0.08
CPSF1-203ENST00000527916 ADGRB2O60241 1585 aa15.57■□□□□ 0.08
CPSF1-203ENST00000527916 TRIM37O94972 964 aa15.56■□□□□ 0.08
CPSF1-203ENST00000527916 PRDM11Q9NQV5 511 aa15.56■□□□□ 0.08
CPSF1-203ENST00000527916 APBA3O96018 575 aa15.55■□□□□ 0.08
CPSF1-203ENST00000527916 TNS1Q9HBL0 1735 aaKnown RBP15.54■□□□□ 0.08
CPSF1-203ENST00000527916 EIF3AQ14152 1382 aaKnown RBP15.54■□□□□ 0.08
CPSF1-203ENST00000527916 NBPF8Q3BBV2 869 aa15.54■□□□□ 0.08
CPSF1-203ENST00000527916 NBPF14Q5TI25 921 aa15.54■□□□□ 0.08
CPSF1-203ENST00000527916 THSD7AQ9UPZ6 1657 aa15.54■□□□□ 0.08
CPSF1-203ENST00000527916 CFAP70Q5T0N1 1121 aa15.53■□□□□ 0.08
CPSF1-203ENST00000527916 TRPM3Q9HCF6 1732 aaPredicted RBP15.52■□□□□ 0.08
CPSF1-203ENST00000527916 SPATA31A1Q5TZJ5 1347 aa15.52■□□□□ 0.08
CPSF1-203ENST00000527916 PAK3O75914 559 aaPredicted RBP15.52■□□□□ 0.08
CPSF1-203ENST00000527916 PPP1R1BQ9UD71 204 aaPredicted RBP15.52■□□□□ 0.08
CPSF1-203ENST00000527916 ALS2Q96Q42 1657 aa15.51■□□□□ 0.07
CPSF1-203ENST00000527916 NGDNQ8NEJ9 315 aaKnown RBP15.51■□□□□ 0.07
CPSF1-203ENST00000527916 PDE3BQ13370 1112 aa15.5■□□□□ 0.07
CPSF1-203ENST00000527916 SPON1Q9HCB6 807 aa15.5■□□□□ 0.07
CPSF1-203ENST00000527916 STRN4Q9NRL3 753 aa15.5■□□□□ 0.07
CPSF1-203ENST00000527916 DLC1Q96QB1 1528 aa15.49■□□□□ 0.07
CPSF1-203ENST00000527916 RAB3GAP2Q9H2M9 1393 aa15.49■□□□□ 0.07
CPSF1-203ENST00000527916 HIRIP3Q9BW71 556 aaPredicted RBP15.48■□□□□ 0.07
CPSF1-203ENST00000527916 KIAA0232Q92628 1395 aa15.48■□□□□ 0.07
CPSF1-203ENST00000527916 EVA1CP58658 441 aa15.47■□□□□ 0.07
CPSF1-203ENST00000527916 USP35Q9P2H5 1018 aa15.47■□□□□ 0.07
CPSF1-203ENST00000527916 NINLQ9Y2I6 1382 aa15.47■□□□□ 0.07
CPSF1-203ENST00000527916 MINK1Q8N4C8 1332 aaPredicted RBP15.46■□□□□ 0.07
CPSF1-203ENST00000527916 CHRNA2Q15822 529 aa15.46■□□□□ 0.07
CPSF1-203ENST00000527916 BARGINQ6ZT62 677 aa15.46■□□□□ 0.07
CPSF1-203ENST00000527916 TULP4Q9NRJ4 1543 aa15.45■□□□□ 0.06
CPSF1-203ENST00000527916 C11orf95C9JLR9 678 aaPredicted RBP15.45■□□□□ 0.06
CPSF1-203ENST00000527916 WASLO00401 505 aaPredicted RBP15.45■□□□□ 0.06
CPSF1-203ENST00000527916 KCNQ2O43526 872 aa15.45■□□□□ 0.06
CPSF1-203ENST00000527916 TRAK1Q9UPV9 953 aa15.45■□□□□ 0.06
CPSF1-203ENST00000527916 RREB1Q92766 1687 aa15.44■□□□□ 0.06
CPSF1-203ENST00000527916 PRR36Q9H6K5 1346 aa15.44■□□□□ 0.06
CPSF1-203ENST00000527916 CRYBG1Q9Y4K1 1723 aa15.44■□□□□ 0.06
CPSF1-203ENST00000527916 ZC3H6P61129 1189 aaKnown RBP15.43■□□□□ 0.06
CPSF1-203ENST00000527916 NUP188Q5SRE5 1749 aa15.43■□□□□ 0.06
CPSF1-203ENST00000527916 TCP11L2Q8N4U5 519 aa15.42■□□□□ 0.06
CPSF1-203ENST00000527916 SSH2Q76I76 1423 aa15.41■□□□□ 0.06
CPSF1-203ENST00000527916 ATP7BP35670 1465 aa15.4■□□□□ 0.06
CPSF1-203ENST00000527916 THRAP3Q9Y2W1 955 aaKnown RBP15.4■□□□□ 0.06
CPSF1-203ENST00000527916 UTRNP46939 3433 aa15.39■□□□□ 0.05
CPSF1-203ENST00000527916 ITSN1Q15811 1721 aa15.38■□□□□ 0.05
CPSF1-203ENST00000527916 ADGRB1O14514 1584 aa15.38■□□□□ 0.05
CPSF1-203ENST00000527916 NUTM2GQ5VZR2 741 aa15.38■□□□□ 0.05
CPSF1-203ENST00000527916 LARP1Q6PKG0 1096 aaKnown RBP15.38■□□□□ 0.05
CPSF1-203ENST00000527916 NUDT16Q96DE0 195 aaKnown RBP15.38■□□□□ 0.05
CPSF1-203ENST00000527916 STAC3Q96MF2 364 aa15.38■□□□□ 0.05
CPSF1-203ENST00000527916 PHRF1Q9P1Y6 1649 aaKnown RBP15.38■□□□□ 0.05
CPSF1-203ENST00000527916 PLSCR1O15162 318 aa15.35■□□□□ 0.05
CPSF1-203ENST00000527916 ABTB2Q8N961 1025 aa15.35■□□□□ 0.05
CPSF1-203ENST00000527916 CPDO75976 1380 aa15.35■□□□□ 0.05
CPSF1-203ENST00000527916 CAMTA1Q9Y6Y1 1673 aa15.35■□□□□ 0.05
CPSF1-203ENST00000527916 OVOS2A0A0G2JMS6 1433 aa15.34■□□□□ 0.05
CPSF1-203ENST00000527916 OVOS2A0A0J9YW53 1432 aa15.34■□□□□ 0.05
CPSF1-203ENST00000527916 OVOS2Q6IE36 1432 aa15.34■□□□□ 0.05
CPSF1-203ENST00000527916 ZNF784Q8NCA9 323 aaPredicted RBP15.33■□□□□ 0.04
CPSF1-203ENST00000527916 KDM2AQ9Y2K7 1162 aa15.33■□□□□ 0.04
CPSF1-203ENST00000527916 ACEP12821 1306 aa15.33■□□□□ 0.04
CPSF1-203ENST00000527916 POLR3AO14802 1390 aaPredicted RBP15.33■□□□□ 0.04
CPSF1-203ENST00000527916 NLRP13Q86W25 1043 aa15.32■□□□□ 0.04
CPSF1-203ENST00000527916 CDK19Q9BWU1 502 aa15.32■□□□□ 0.04
CPSF1-203ENST00000527916 BCL11BQ9C0K0 894 aaPredicted RBP15.32■□□□□ 0.04
CPSF1-203ENST00000527916 CCDC61Q9Y6R9 512 aa15.32■□□□□ 0.04
CPSF1-203ENST00000527916 PARP4Q9UKK3 1724 aaKnown RBP15.31■□□□□ 0.04
CPSF1-203ENST00000527916 RGPD3A6NKT7 1758 aaPredicted RBP15.31■□□□□ 0.04
CPSF1-203ENST00000527916 RGPD4Q7Z3J3 1758 aa15.31■□□□□ 0.04
CPSF1-203ENST00000527916 DCAF11Q8TEB1 546 aa15.31■□□□□ 0.04
CPSF1-203ENST00000527916 NRKQ7Z2Y5 1582 aa15.31■□□□□ 0.04
CPSF1-203ENST00000527916 USP19O94966 1318 aa15.3■□□□□ 0.04
CPSF1-203ENST00000527916 GCP02774 474 aa15.3■□□□□ 0.04
CPSF1-203ENST00000527916 DDB1Q16531 1140 aa15.3■□□□□ 0.04
CPSF1-203ENST00000527916 LMO7Q8WWI1 1683 aa15.3■□□□□ 0.04
CPSF1-203ENST00000527916 CRB1P82279 1406 aa15.29■□□□□ 0.04
CPSF1-203ENST00000527916 SENP3-EIF4A1A0A087X0R7 540 aa15.29■□□□□ 0.04
CPSF1-203ENST00000527916 PLEKHG3A1L390 1219 aa15.29■□□□□ 0.04
CPSF1-203ENST00000527916 ZBTB7AO95365 584 aa15.29■□□□□ 0.04
CPSF1-203ENST00000527916 ANO8Q9HCE9 1232 aaPredicted RBP15.29■□□□□ 0.04
CPSF1-203ENST00000527916 COL5A2P05997 1499 aaPredicted RBP15.28■□□□□ 0.04
CPSF1-203ENST00000527916 CASZ1Q86V15 1759 aa15.27■□□□□ 0.04
CPSF1-203ENST00000527916 STK32BQ9NY57 414 aa15.27■□□□□ 0.04
CPSF1-203ENST00000527916 SBF2Q86WG5 1849 aa15.27■□□□□ 0.03
CPSF1-203ENST00000527916 ARHGEF28Q8N1W1 1705 aaKnown RBP15.26■□□□□ 0.03
CPSF1-203ENST00000527916 ZBTB7CA1YPR0 619 aa15.26■□□□□ 0.03
CPSF1-203ENST00000527916 PTGER2P43116 358 aa15.26■□□□□ 0.03
CPSF1-203ENST00000527916 TOM1L2Q6ZVM7 507 aa15.26■□□□□ 0.03
CPSF1-203ENST00000527916 CDCA7Q9BWT1 371 aaPredicted RBP15.26■□□□□ 0.03
CPSF1-203ENST00000527916 ATF5Q9Y2D1 282 aaPredicted RBP15.26■□□□□ 0.03
CPSF1-203ENST00000527916 PEAK1Q9H792 1746 aa15.26■□□□□ 0.03
CPSF1-203ENST00000527916 CHD4Q14839 1912 aa15.25■□□□□ 0.03
CPSF1-203ENST00000527916 SYT17Q9BSW7 474 aa15.25■□□□□ 0.03
CPSF1-203ENST00000527916 FHDC1Q9C0D6 1143 aaPredicted RBP15.25■□□□□ 0.03
CPSF1-203ENST00000527916 PDGFDQ9GZP0 370 aaPredicted RBP15.25■□□□□ 0.03
CPSF1-203ENST00000527916 C1QTNF8P60827 252 aa15.24■□□□□ 0.03
CPSF1-203ENST00000527916 MYOM1P52179 1685 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms