RNA–Protein interactions for RNA: ENST00000526821.5

ATPAF1-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 3

Gene ATPAF1, Length 1,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-208ENST00000526821 PBRM1Q86U86 1689 aa9.74□□□□□ -0.85
ATPAF1-208ENST00000526821 NRG2O14511 850 aaPredicted RBP9.74□□□□□ -0.85
ATPAF1-208ENST00000526821 DXOO77932 396 aaKnown RBP9.74□□□□□ -0.85
ATPAF1-208ENST00000526821 JUNDP17535 347 aa9.74□□□□□ -0.85
ATPAF1-208ENST00000526821 MTMR2Q13614 643 aa9.74□□□□□ -0.85
ATPAF1-208ENST00000526821 Q6ZNB5 142 aa9.74□□□□□ -0.85
ATPAF1-208ENST00000526821 EIF4G3O43432 1585 aaKnown RBP9.74□□□□□ -0.85
ATPAF1-208ENST00000526821 CCDC24Q8N4L8 307 aa9.73□□□□□ -0.85
ATPAF1-208ENST00000526821 FHAD1B1AJZ9 1412 aa9.73□□□□□ -0.85
ATPAF1-208ENST00000526821 ADAMTS12P58397 1594 aa9.72□□□□□ -0.85
ATPAF1-208ENST00000526821 PLA2G2CQ5R387 149 aa9.72□□□□□ -0.85
ATPAF1-208ENST00000526821 RSBN1LQ6PCB5 846 aaPredicted RBP9.72□□□□□ -0.85
ATPAF1-208ENST00000526821 RIC3Q7Z5B4 369 aa9.72□□□□□ -0.85
ATPAF1-208ENST00000526821 SYMPKQ92797 1274 aaKnown RBP9.72□□□□□ -0.85
ATPAF1-208ENST00000526821 PCDHGC3Q9UN70 934 aa9.72□□□□□ -0.85
ATPAF1-208ENST00000526821 CLIP1P30622 1438 aa9.72□□□□□ -0.85
ATPAF1-208ENST00000526821 SPTLC1O15269 473 aa9.71□□□□□ -0.86
ATPAF1-208ENST00000526821 ZBTB3Q9H5J0 574 aa9.71□□□□□ -0.86
ATPAF1-208ENST00000526821 DDRGK1Q96HY6 314 aa9.7□□□□□ -0.86
ATPAF1-208ENST00000526821 PRPF38BQ5VTL8 546 aaKnown RBP9.69□□□□□ -0.86
ATPAF1-208ENST00000526821 PRR7Q8TB68 274 aa9.69□□□□□ -0.86
ATPAF1-208ENST00000526821 EMID1Q96A84 441 aaPredicted RBP9.69□□□□□ -0.86
ATPAF1-208ENST00000526821 MAGI1Q96QZ7 1491 aaPredicted RBP9.69□□□□□ -0.86
ATPAF1-208ENST00000526821 SNAPC4Q5SXM2 1469 aa9.68□□□□□ -0.86
ATPAF1-208ENST00000526821 PRR20EP86478 221 aa9.68□□□□□ -0.86
ATPAF1-208ENST00000526821 PRR20CP86479 221 aa9.68□□□□□ -0.86
ATPAF1-208ENST00000526821 PRR20DP86480 221 aa9.68□□□□□ -0.86
ATPAF1-208ENST00000526821 PRR20BP86481 221 aa9.68□□□□□ -0.86
ATPAF1-208ENST00000526821 PRR20AP86496 221 aa9.68□□□□□ -0.86
ATPAF1-208ENST00000526821 NUDT12Q9BQG2 462 aa9.68□□□□□ -0.86
ATPAF1-208ENST00000526821 NUTM2BA6NNL0 878 aaPredicted RBP9.67□□□□□ -0.86
ATPAF1-208ENST00000526821 NUTM2EB1AL46 878 aaPredicted RBP9.67□□□□□ -0.86
ATPAF1-208ENST00000526821 NUTM2DQ5VT03 806 aaPredicted RBP9.67□□□□□ -0.86
ATPAF1-208ENST00000526821 MYSM1Q5VVJ2 828 aa9.67□□□□□ -0.86
ATPAF1-208ENST00000526821 DESI1Q6ICB0 168 aa9.67□□□□□ -0.86
ATPAF1-208ENST00000526821 NUTM2AQ8IVF1 878 aaPredicted RBP9.67□□□□□ -0.86
ATPAF1-208ENST00000526821 KDM4CQ9H3R0 1056 aa9.67□□□□□ -0.86
ATPAF1-208ENST00000526821 ATP1B4Q9UN42 357 aaPredicted RBP9.67□□□□□ -0.86
ATPAF1-208ENST00000526821 ARHGAP35Q9NRY4 1499 aa9.66□□□□□ -0.86
ATPAF1-208ENST00000526821 FOXC1Q12948 553 aa9.66□□□□□ -0.86
ATPAF1-208ENST00000526821 TRIM32Q13049 653 aa9.66□□□□□ -0.86
ATPAF1-208ENST00000526821 PTPRNQ16849 979 aa9.66□□□□□ -0.86
ATPAF1-208ENST00000526821 CSPP1Q1MSJ5 1256 aa9.66□□□□□ -0.86
ATPAF1-208ENST00000526821 TUSC1Q2TAM9 212 aa9.66□□□□□ -0.86
ATPAF1-208ENST00000526821 CTTNBP2Q8WZ74 1663 aa9.65□□□□□ -0.86
ATPAF1-208ENST00000526821 CCNYL3P0C7X3 344 aa9.65□□□□□ -0.86
ATPAF1-208ENST00000526821 CLK2P49760 499 aaKnown RBP9.65□□□□□ -0.86
ATPAF1-208ENST00000526821 SYNJ2O15056 1496 aa9.65□□□□□ -0.87
ATPAF1-208ENST00000526821 ARAP1Q96P48 1450 aa9.65□□□□□ -0.87
ATPAF1-208ENST00000526821 VPS8Q8N3P4 1428 aa9.65□□□□□ -0.87
ATPAF1-208ENST00000526821 TNFRSF10AO00220 468 aa9.64□□□□□ -0.87
ATPAF1-208ENST00000526821 HRCP23327 699 aa9.64□□□□□ -0.87
ATPAF1-208ENST00000526821 PKDCCQ504Y2 493 aa9.64□□□□□ -0.87
ATPAF1-208ENST00000526821 GPBP1L1Q9HC44 474 aaPredicted RBP9.64□□□□□ -0.87
ATPAF1-208ENST00000526821 GRIN2AQ12879 1464 aa9.64□□□□□ -0.87
ATPAF1-208ENST00000526821 PCDHB15Q9Y5E8 787 aa9.63□□□□□ -0.87
ATPAF1-208ENST00000526821 GDF9O60383 454 aa9.62□□□□□ -0.87
ATPAF1-208ENST00000526821 CYP4X1Q8N118 509 aa9.62□□□□□ -0.87
ATPAF1-208ENST00000526821 EFCAB5A4FU69 1503 aa9.61□□□□□ -0.87
ATPAF1-208ENST00000526821 DGAT1O75907 488 aa9.61□□□□□ -0.87
ATPAF1-208ENST00000526821 WNT7BP56706 349 aa9.61□□□□□ -0.87
ATPAF1-208ENST00000526821 NEUROD2Q15784 382 aa9.61□□□□□ -0.87
ATPAF1-208ENST00000526821 TPRNQ4KMQ1 711 aa9.61□□□□□ -0.87
ATPAF1-208ENST00000526821 TRAF7Q6Q0C0 670 aa9.61□□□□□ -0.87
ATPAF1-208ENST00000526821 TRIM67Q6ZTA4 783 aa9.61□□□□□ -0.87
ATPAF1-208ENST00000526821 HELBQ8NG08 1087 aaPredicted RBP9.61□□□□□ -0.87
ATPAF1-208ENST00000526821 TSC1Q92574 1164 aa9.61□□□□□ -0.87
ATPAF1-208ENST00000526821 POLR3EQ9NVU0 708 aa9.61□□□□□ -0.87
ATPAF1-208ENST00000526821 LIMD1Q9UGP4 676 aa9.61□□□□□ -0.87
ATPAF1-208ENST00000526821 NUP160Q12769 1436 aa9.6□□□□□ -0.87
ATPAF1-208ENST00000526821 FAM187AA6NFU0 413 aa9.6□□□□□ -0.87
ATPAF1-208ENST00000526821 CABLES1Q8TDN4 633 aa9.6□□□□□ -0.87
ATPAF1-208ENST00000526821 KIAA0586Q9BVV6 1533 aa9.6□□□□□ -0.87
ATPAF1-208ENST00000526821 SAMD9Q5K651 1589 aa9.59□□□□□ -0.87
ATPAF1-208ENST00000526821 WNT7AO00755 349 aa9.59□□□□□ -0.87
ATPAF1-208ENST00000526821 CTHP32929 405 aa9.59□□□□□ -0.87
ATPAF1-208ENST00000526821 RANGAP1P46060 587 aaPredicted RBP9.59□□□□□ -0.87
ATPAF1-208ENST00000526821 SKIV2LQ15477 1246 aaKnown RBP9.59□□□□□ -0.87
ATPAF1-208ENST00000526821 SH3D19Q5HYK7 790 aa9.59□□□□□ -0.87
ATPAF1-208ENST00000526821 EVA1BQ9NVM1 165 aa9.59□□□□□ -0.87
ATPAF1-208ENST00000526821 PKD2L1Q9P0L9 805 aa9.59□□□□□ -0.87
ATPAF1-208ENST00000526821 IQGAP2Q13576 1575 aa9.58□□□□□ -0.88
ATPAF1-208ENST00000526821 TTC24A2A3L6 582 aaPredicted RBP9.58□□□□□ -0.88
ATPAF1-208ENST00000526821 LILRB3O75022 631 aa9.58□□□□□ -0.88
ATPAF1-208ENST00000526821 KCNH2Q12809 1159 aa9.58□□□□□ -0.88
ATPAF1-208ENST00000526821 LYPD8Q6UX82 237 aa9.58□□□□□ -0.88
ATPAF1-208ENST00000526821 CHMP7Q8WUX9 453 aaPredicted RBP9.58□□□□□ -0.88
ATPAF1-208ENST00000526821 FAM117AQ9C073 453 aa9.58□□□□□ -0.88
ATPAF1-208ENST00000526821 CEP170Q5SW79 1584 aa9.58□□□□□ -0.88
ATPAF1-208ENST00000526821 UGGT2Q9NYU1 1516 aa9.57□□□□□ -0.88
ATPAF1-208ENST00000526821 CFAP99D6REC4 459 aa9.57□□□□□ -0.88
ATPAF1-208ENST00000526821 QPCTQ16769 361 aa9.56□□□□□ -0.88
ATPAF1-208ENST00000526821 UNC93B1Q9H1C4 597 aa9.56□□□□□ -0.88
ATPAF1-208ENST00000526821 SNIP1Q8TAD8 396 aaKnown RBP9.55□□□□□ -0.88
ATPAF1-208ENST00000526821 FHOD3Q2V2M9 1422 aa9.55□□□□□ -0.88
ATPAF1-208ENST00000526821 RC3H1Q5TC82 1133 aaKnown RBP9.54□□□□□ -0.88
ATPAF1-208ENST00000526821 PTCRAQ6ISU1 281 aaPredicted RBP9.54□□□□□ -0.88
ATPAF1-208ENST00000526821 EHBP1Q8NDI1 1231 aa9.53□□□□□ -0.88
ATPAF1-208ENST00000526821 ARMC2Q8NEN0 867 aa9.53□□□□□ -0.88
ATPAF1-208ENST00000526821 MRGPRX2Q96LB1 330 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms