RNA–Protein interactions for RNA: ENST00000508236.1

CCDC149-206, Transcript of coiled-coil domain containing 149, humanhuman

TSL 4

Gene CCDC149, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-206ENST00000508236 CTTNBP2Q8WZ74 1663 aa11.41□□□□□ -0.58
CCDC149-206ENST00000508236 CFAP99D6REC4 459 aa11.41□□□□□ -0.58
CCDC149-206ENST00000508236 HOXB3P14651 431 aaPredicted RBP11.41□□□□□ -0.58
CCDC149-206ENST00000508236 SEMA3FQ13275 785 aa11.41□□□□□ -0.58
CCDC149-206ENST00000508236 WDR97A6NE52 1622 aa11.41□□□□□ -0.58
CCDC149-206ENST00000508236 POLA1P09884 1462 aaPredicted RBP11.4□□□□□ -0.58
CCDC149-206ENST00000508236 CFAP43Q8NDM7 1665 aa11.4□□□□□ -0.59
CCDC149-206ENST00000508236 FHAD1B1AJZ9 1412 aa11.39□□□□□ -0.59
CCDC149-206ENST00000508236 IGSF3O75054 1194 aa11.39□□□□□ -0.59
CCDC149-206ENST00000508236 SLC10A3P09131 477 aa11.39□□□□□ -0.59
CCDC149-206ENST00000508236 EFCAB5A4FU69 1503 aa11.39□□□□□ -0.59
CCDC149-206ENST00000508236 NESP48681 1621 aa11.38□□□□□ -0.59
CCDC149-206ENST00000508236 RAD54L2Q9Y4B4 1467 aa11.38□□□□□ -0.59
CCDC149-206ENST00000508236 C6orf229H3BNL8 230 aa11.38□□□□□ -0.59
CCDC149-206ENST00000508236 TBC1D9Q6ZT07 1266 aa11.38□□□□□ -0.59
CCDC149-206ENST00000508236 SLF2Q8IX21 1173 aa11.37□□□□□ -0.59
CCDC149-206ENST00000508236 PNMA1Q8ND90 353 aa11.37□□□□□ -0.59
CCDC149-206ENST00000508236 GNEQ9Y223 722 aaKnown RBP11.37□□□□□ -0.59
CCDC149-206ENST00000508236 CCNB3Q8WWL7 1395 aa11.37□□□□□ -0.59
CCDC149-206ENST00000508236 NR6A1Q15406 480 aa11.36□□□□□ -0.59
CCDC149-206ENST00000508236 PROX2Q3B8N5 592 aa11.36□□□□□ -0.59
CCDC149-206ENST00000508236 B4GALNT3Q6L9W6 998 aa11.36□□□□□ -0.59
CCDC149-206ENST00000508236 URB2Q14146 1524 aaKnown RBP11.35□□□□□ -0.59
CCDC149-206ENST00000508236 ATP9BO43861 1147 aa11.35□□□□□ -0.59
CCDC149-206ENST00000508236 GRIPAP1Q4V328 841 aa11.35□□□□□ -0.59
CCDC149-206ENST00000508236 POTEHQ6S545 545 aa11.35□□□□□ -0.59
CCDC149-206ENST00000508236 DHX57Q6P158 1386 aaKnown RBP11.35□□□□□ -0.59
CCDC149-206ENST00000508236 PDS5BQ9NTI5 1447 aa11.35□□□□□ -0.59
CCDC149-206ENST00000508236 LRRC9Q6ZRR7 1453 aa11.34□□□□□ -0.59
CCDC149-206ENST00000508236 EIF4G2P78344 907 aaKnown RBP eCLIP11.34□□□□□ -0.59
CCDC149-206ENST00000508236 SWT1Q5T5J6 900 aaKnown RBP11.34□□□□□ -0.59
CCDC149-206ENST00000508236 ABCA5Q8WWZ7 1642 aa11.34□□□□□ -0.59
CCDC149-206ENST00000508236 AQRO60306 1485 aaKnown RBP eCLIP11.33□□□□□ -0.6
CCDC149-206ENST00000508236 PCF11O94913 1555 aaKnown RBP11.33□□□□□ -0.6
CCDC149-206ENST00000508236 POTEIP0CG38 1075 aa11.32□□□□□ -0.6
CCDC149-206ENST00000508236 KIAA1468Q9P260 1216 aa11.32□□□□□ -0.6
CCDC149-206ENST00000508236 MYT1LQ9UL68 1186 aa11.32□□□□□ -0.6
CCDC149-206ENST00000508236 FYCO1Q9BQS8 1478 aa11.32□□□□□ -0.6
CCDC149-206ENST00000508236 KIF21AQ7Z4S6 1674 aa11.31□□□□□ -0.6
CCDC149-206ENST00000508236 ELOAQ14241 798 aaKnown RBP11.31□□□□□ -0.6
CCDC149-206ENST00000508236 CASKIN1Q8WXD9 1431 aa11.3□□□□□ -0.6
CCDC149-206ENST00000508236 FUT2Q10981 343 aa11.3□□□□□ -0.6
CCDC149-206ENST00000508236 PER1O15534 1290 aaPredicted RBP11.29□□□□□ -0.6
CCDC149-206ENST00000508236 SYMPKQ92797 1274 aaKnown RBP11.29□□□□□ -0.6
CCDC149-206ENST00000508236 GAPVD1Q14C86 1478 aa11.28□□□□□ -0.6
CCDC149-206ENST00000508236 KCNK17Q96T54 332 aa11.28□□□□□ -0.6
CCDC149-206ENST00000508236 FMN1Q68DA7 1419 aa11.27□□□□□ -0.6
CCDC149-206ENST00000508236 SLC4A3P48751 1232 aa11.27□□□□□ -0.61
CCDC149-206ENST00000508236 HDGFP51858 240 aaKnown RBP11.27□□□□□ -0.61
CCDC149-206ENST00000508236 NR1H3Q13133 447 aa11.27□□□□□ -0.61
CCDC149-206ENST00000508236 TMEM164Q5U3C3 297 aa11.27□□□□□ -0.61
CCDC149-206ENST00000508236 ZMIZ1Q9ULJ6 1067 aa11.27□□□□□ -0.61
CCDC149-206ENST00000508236 FHOD3Q2V2M9 1422 aa11.26□□□□□ -0.61
CCDC149-206ENST00000508236 SAMD9Q5K651 1589 aa11.26□□□□□ -0.61
CCDC149-206ENST00000508236 ANP32EQ9BTT0 268 aa11.26□□□□□ -0.61
CCDC149-206ENST00000508236 TARBP1Q13395 1621 aaKnown RBP11.25□□□□□ -0.61
CCDC149-206ENST00000508236 ATP6V1AP38606 617 aa11.25□□□□□ -0.61
CCDC149-206ENST00000508236 TXNDC2Q86VQ3 553 aa11.25□□□□□ -0.61
CCDC149-206ENST00000508236 STK32AQ8WU08 396 aa11.25□□□□□ -0.61
CCDC149-206ENST00000508236 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.25□□□□□ -0.61
CCDC149-206ENST00000508236 SETD5Q9C0A6 1442 aa11.25□□□□□ -0.61
CCDC149-206ENST00000508236 NFATC2IPQ8NCF5 419 aa11.24□□□□□ -0.61
CCDC149-206ENST00000508236 KCNH8Q96L42 1107 aa11.24□□□□□ -0.61
CCDC149-206ENST00000508236 ZBED2Q9BTP6 218 aa11.24□□□□□ -0.61
CCDC149-206ENST00000508236 NOVA2Q9UNW9 492 aaKnown RBP11.24□□□□□ -0.61
CCDC149-206ENST00000508236 PBRM1Q86U86 1689 aa11.24□□□□□ -0.61
CCDC149-206ENST00000508236 PIK3CDO00329 1044 aa11.23□□□□□ -0.61
CCDC149-206ENST00000508236 CFHP08603 1231 aa11.23□□□□□ -0.61
CCDC149-206ENST00000508236 RETREG3Q86VR2 466 aa11.23□□□□□ -0.61
CCDC149-206ENST00000508236 PHLDB1Q86UU1 1377 aa11.23□□□□□ -0.61
CCDC149-206ENST00000508236 THOC2Q8NI27 1593 aaKnown RBP11.23□□□□□ -0.61
CCDC149-206ENST00000508236 RBM47A0AV96 593 aaKnown RBP11.22□□□□□ -0.61
CCDC149-206ENST00000508236 USP17L3A6NCW0 530 aa11.22□□□□□ -0.61
CCDC149-206ENST00000508236 USP17L4A6NCW7 530 aa11.22□□□□□ -0.61
CCDC149-206ENST00000508236 UNCXA6NJT0 531 aa11.22□□□□□ -0.61
CCDC149-206ENST00000508236 DESI1Q6ICB0 168 aa11.22□□□□□ -0.61
CCDC149-206ENST00000508236 PHLDB3Q6NSJ2 640 aa11.22□□□□□ -0.61
CCDC149-206ENST00000508236 USP17L2Q6R6M4 530 aa11.22□□□□□ -0.61
CCDC149-206ENST00000508236 USP17L1Q7RTZ2 530 aa11.22□□□□□ -0.61
CCDC149-206ENST00000508236 TDRD9Q8NDG6 1382 aaKnown RBP11.22□□□□□ -0.61
CCDC149-206ENST00000508236 RAB3GAP2Q9H2M9 1393 aa11.22□□□□□ -0.61
CCDC149-206ENST00000508236 SNAPC4Q5SXM2 1469 aa11.21□□□□□ -0.61
CCDC149-206ENST00000508236 FBXO45P0C2W1 286 aa11.21□□□□□ -0.61
CCDC149-206ENST00000508236 NEUROD1Q13562 356 aa11.21□□□□□ -0.61
CCDC149-206ENST00000508236 SEPT9Q9UHD8 586 aaPredicted RBP11.21□□□□□ -0.61
CCDC149-206ENST00000508236 ZBBXA8MT70 800 aa11.2□□□□□ -0.62
CCDC149-206ENST00000508236 SKIP12755 728 aa11.2□□□□□ -0.62
CCDC149-206ENST00000508236 ITGAEP38570 1179 aa11.2□□□□□ -0.62
CCDC149-206ENST00000508236 PLEKHM2Q8IWE5 1019 aa11.2□□□□□ -0.62
CCDC149-206ENST00000508236 RABGEF1Q9UJ41 708 aa11.2□□□□□ -0.62
CCDC149-206ENST00000508236 LRRIQ1Q96JM4 1722 aa11.19□□□□□ -0.62
CCDC149-206ENST00000508236 ARID4AP29374 1257 aaPredicted RBP11.19□□□□□ -0.62
CCDC149-206ENST00000508236 LYPD8Q6UX82 237 aa11.19□□□□□ -0.62
CCDC149-206ENST00000508236 USP17L5A8MUK1 530 aa11.18□□□□□ -0.62
CCDC149-206ENST00000508236 FAM50AQ14320 339 aaKnown RBP11.18□□□□□ -0.62
CCDC149-206ENST00000508236 GRIN2BQ13224 1484 aa11.18□□□□□ -0.62
CCDC149-206ENST00000508236 MRC2Q9UBG0 1479 aa11.18□□□□□ -0.62
CCDC149-206ENST00000508236 FAM196BA6NMK8 535 aa11.17□□□□□ -0.62
CCDC149-206ENST00000508236 ERCC3P19447 782 aa11.17□□□□□ -0.62
CCDC149-206ENST00000508236 SSFA2P28290 1259 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms