RNA–Protein interactions for RNA: ENST00000496144.5

VPS13B-206, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 5,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-206ENST00000496144 MSH5O43196 834 aa11.5□□□□□ -0.57
VPS13B-206ENST00000496144 ZC3H6P61129 1189 aaKnown RBP11.5□□□□□ -0.57
VPS13B-206ENST00000496144 NWD1Q149M9 1564 aa11.5□□□□□ -0.57
VPS13B-206ENST00000496144 COG3Q96JB2 828 aa11.5□□□□□ -0.57
VPS13B-206ENST00000496144 SUPT16HQ9Y5B9 1047 aaKnown RBP11.5□□□□□ -0.57
VPS13B-206ENST00000496144 ANKARQ7Z5J8 1434 aa11.49□□□□□ -0.57
VPS13B-206ENST00000496144 ROBO2Q9HCK4 1378 aa11.49□□□□□ -0.57
VPS13B-206ENST00000496144 SETBP1Q9Y6X0 1596 aa11.49□□□□□ -0.57
VPS13B-206ENST00000496144 SEPT12Q8IYM1 358 aa11.48□□□□□ -0.57
VPS13B-206ENST00000496144 MST1RQ04912 1400 aa11.48□□□□□ -0.57
VPS13B-206ENST00000496144 FAM196AQ6ZSG2 479 aa11.48□□□□□ -0.57
VPS13B-206ENST00000496144 NLRP2Q9NX02 1062 aa11.48□□□□□ -0.57
VPS13B-206ENST00000496144 SBNO1A3KN83 1393 aa11.48□□□□□ -0.57
VPS13B-206ENST00000496144 ALKQ9UM73 1620 aa11.48□□□□□ -0.57
VPS13B-206ENST00000496144 SMG6Q86US8 1419 aaKnown RBP11.47□□□□□ -0.57
VPS13B-206ENST00000496144 SPATA31A3Q5VYP0 1347 aa11.47□□□□□ -0.57
VPS13B-206ENST00000496144 FAM98CQ17RN3 349 aaKnown RBP11.47□□□□□ -0.57
VPS13B-206ENST00000496144 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.47□□□□□ -0.576e-7■■■■□ 20.3
VPS13B-206ENST00000496144 KLHL34Q8N239 644 aa11.47□□□□□ -0.57
VPS13B-206ENST00000496144 TNS3Q68CZ2 1445 aa11.47□□□□□ -0.57
VPS13B-206ENST00000496144 PRKRIP1Q9H875 184 aaPredicted RBP11.47□□□□□ -0.57
VPS13B-206ENST00000496144 BCL11BQ9C0K0 894 aaPredicted RBP11.47□□□□□ -0.57
VPS13B-206ENST00000496144 BRD4O60885 1362 aaPredicted RBP11.47□□□□□ -0.57
VPS13B-206ENST00000496144 CABP2Q9NPB3 220 aa11.46□□□□□ -0.57
VPS13B-206ENST00000496144 PELP1Q8IZL8 1130 aaKnown RBP11.46□□□□□ -0.58
VPS13B-206ENST00000496144 VPS72Q15906 364 aa11.46□□□□□ -0.58
VPS13B-206ENST00000496144 CABLES1Q8TDN4 633 aa11.46□□□□□ -0.58
VPS13B-206ENST00000496144 SOS2Q07890 1332 aaPredicted RBP11.46□□□□□ -0.58
VPS13B-206ENST00000496144 EXOC5O00471 708 aa11.45□□□□□ -0.58
VPS13B-206ENST00000496144 STK32BQ9NY57 414 aa11.45□□□□□ -0.58
VPS13B-206ENST00000496144 APBA3O96018 575 aa11.45□□□□□ -0.58
VPS13B-206ENST00000496144 TCP11L2Q8N4U5 519 aa11.44□□□□□ -0.58
VPS13B-206ENST00000496144 MYOM2P54296 1465 aa11.43□□□□□ -0.58
VPS13B-206ENST00000496144 PPM1GO15355 546 aaPredicted RBP11.43□□□□□ -0.58
VPS13B-206ENST00000496144 DDB1Q16531 1140 aa11.43□□□□□ -0.58
VPS13B-206ENST00000496144 RAPGEF4Q8WZA2 1011 aa11.43□□□□□ -0.58
VPS13B-206ENST00000496144 PTPRUQ92729 1446 aa11.43□□□□□ -0.58
VPS13B-206ENST00000496144 ACEP12821 1306 aa11.43□□□□□ -0.58
VPS13B-206ENST00000496144 TTC21AQ8NDW8 1320 aa11.43□□□□□ -0.58
VPS13B-206ENST00000496144 NEXMIFQ5QGS0 1516 aa11.43□□□□□ -0.58
VPS13B-206ENST00000496144 UPF1Q92900 1129 aaKnown RBP eCLIP11.42□□□□□ -0.58
VPS13B-206ENST00000496144 SYTL4Q96C24 671 aaPredicted RBP11.42□□□□□ -0.58
VPS13B-206ENST00000496144 LTV1Q96GA3 475 aaPredicted RBP11.42□□□□□ -0.58
VPS13B-206ENST00000496144 POLD1P28340 1107 aa11.42□□□□□ -0.58
VPS13B-206ENST00000496144 KTN1Q86UP2 1357 aaKnown RBP11.42□□□□□ -0.58
VPS13B-206ENST00000496144 AHDC1Q5TGY3 1603 aaPredicted RBP11.42□□□□□ -0.58
VPS13B-206ENST00000496144 THRAP3Q9Y2W1 955 aaKnown RBP11.41□□□□□ -0.58
VPS13B-206ENST00000496144 CCDC184Q52MB2 194 aa11.41□□□□□ -0.58
VPS13B-206ENST00000496144 CABP1Q9NZU7 370 aa11.41□□□□□ -0.58
VPS13B-206ENST00000496144 CHRNA2Q15822 529 aa11.41□□□□□ -0.58
VPS13B-206ENST00000496144 MYOM1P52179 1685 aa11.4□□□□□ -0.58
VPS13B-206ENST00000496144 PIK3C2GO75747 1445 aa11.4□□□□□ -0.58
VPS13B-206ENST00000496144 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.4□□□□□ -0.58
VPS13B-206ENST00000496144 PPLO60437 1756 aa11.4□□□□□ -0.58
VPS13B-206ENST00000496144 KIF1AQ12756 1690 aa11.4□□□□□ -0.58
VPS13B-206ENST00000496144 ST20-MTHFSA0A0A6YYL1 179 aa11.39□□□□□ -0.59
VPS13B-206ENST00000496144 NPHP1O15259 732 aa11.39□□□□□ -0.59
VPS13B-206ENST00000496144 PPIP5K1Q6PFW1 1433 aa11.39□□□□□ -0.59
VPS13B-206ENST00000496144 CHD2O14647 1828 aaKnown RBP11.38□□□□□ -0.59
VPS13B-206ENST00000496144 NRXN1Q9ULB1 1477 aa11.38□□□□□ -0.59
VPS13B-206ENST00000496144 TATP17735 454 aaPredicted RBP11.38□□□□□ -0.59
VPS13B-206ENST00000496144 CDK12Q9NYV4 1490 aaPredicted RBP11.38□□□□□ -0.59
VPS13B-206ENST00000496144 FNBP4Q8N3X1 1017 aaPredicted RBP11.38□□□□□ -0.59
VPS13B-206ENST00000496144 ATP7BP35670 1465 aa11.37□□□□□ -0.59
VPS13B-206ENST00000496144 CDC42BPGQ6DT37 1551 aa11.37□□□□□ -0.59
VPS13B-206ENST00000496144 HNRNPUQ00839 825 aaKnown RBP eCLIP11.37□□□□□ -0.59
VPS13B-206ENST00000496144 NBPF1Q3BBV0 1214 aa11.37□□□□□ -0.59
VPS13B-206ENST00000496144 KNSTRNQ9Y448 316 aa11.37□□□□□ -0.59
VPS13B-206ENST00000496144 PLEKHH1Q9ULM0 1364 aa11.37□□□□□ -0.59
VPS13B-206ENST00000496144 MRS2Q9HD23 443 aa11.36□□□□□ -0.59
VPS13B-206ENST00000496144 CFAP53Q96M91 514 aa11.35□□□□□ -0.59
VPS13B-206ENST00000496144 ZBED9Q6R2W3 1325 aa11.35□□□□□ -0.59
VPS13B-206ENST00000496144 NINLQ9Y2I6 1382 aa11.35□□□□□ -0.59
VPS13B-206ENST00000496144 DLC1Q96QB1 1528 aa11.34□□□□□ -0.59
VPS13B-206ENST00000496144 BLMP54132 1417 aaPredicted RBP11.34□□□□□ -0.59
VPS13B-206ENST00000496144 GCP02774 474 aa11.34□□□□□ -0.59
VPS13B-206ENST00000496144 FKBP8Q14318 412 aa11.33□□□□□ -0.6
VPS13B-206ENST00000496144 TESK2Q96S53 571 aa11.33□□□□□ -0.6
VPS13B-206ENST00000496144 MYO5BQ9ULV0 1848 aa11.33□□□□□ -0.6
VPS13B-206ENST00000496144 TULP4Q9NRJ4 1543 aa11.33□□□□□ -0.6
VPS13B-206ENST00000496144 PARD3Q8TEW0 1356 aa11.33□□□□□ -0.6
VPS13B-206ENST00000496144 TRIM37O94972 964 aa11.33□□□□□ -0.6
VPS13B-206ENST00000496144 SPG7Q9UQ90 795 aa11.33□□□□□ -0.6
VPS13B-206ENST00000496144 PLEKHG3A1L390 1219 aa11.32□□□□□ -0.6
VPS13B-206ENST00000496144 DDX54Q8TDD1 881 aaKnown RBP11.32□□□□□ -0.6
VPS13B-206ENST00000496144 CGNL1Q0VF96 1302 aa11.32□□□□□ -0.6
VPS13B-206ENST00000496144 C1orf141Q5JVX7 400 aa11.32□□□□□ -0.6
VPS13B-206ENST00000496144 TECPR2O15040 1411 aa11.32□□□□□ -0.6
VPS13B-206ENST00000496144 RALBP1Q15311 655 aa11.32□□□□□ -0.6
VPS13B-206ENST00000496144 MYBBP1AQ9BQG0 1328 aaKnown RBP11.32□□□□□ -0.6
VPS13B-206ENST00000496144 FAM9BQ8IZU0 186 aa11.32□□□□□ -0.6
VPS13B-206ENST00000496144 SPON1Q9HCB6 807 aa11.31□□□□□ -0.6
VPS13B-206ENST00000496144 SETD1AO15047 1707 aaKnown RBP11.31□□□□□ -0.6
VPS13B-206ENST00000496144 CNGB1Q14028 1251 aaPredicted RBP11.31□□□□□ -0.6
VPS13B-206ENST00000496144 SHPRHQ149N8 1683 aa11.31□□□□□ -0.6
VPS13B-206ENST00000496144 FAM83GA6ND36 823 aa11.31□□□□□ -0.6
VPS13B-206ENST00000496144 IL2RBP14784 551 aa11.31□□□□□ -0.6
VPS13B-206ENST00000496144 MORC1Q86VD1 984 aa11.31□□□□□ -0.6
VPS13B-206ENST00000496144 QRICH2Q9H0J4 1663 aa11.3□□□□□ -0.6
VPS13B-206ENST00000496144 KIAA0232Q92628 1395 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 225 ms