RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 GPRASP1Q5JY77 1395 aa11.48□□□□□ -0.57
PDPN-205ENST00000487038 DHX57Q6P158 1386 aaKnown RBP11.48□□□□□ -0.57
PDPN-205ENST00000487038 TULP4Q9NRJ4 1543 aa11.47□□□□□ -0.57
PDPN-205ENST00000487038 SPATA31A5Q5VU36 1347 aa11.47□□□□□ -0.57
PDPN-205ENST00000487038 SPATA31A7Q8IWB4 1347 aa11.47□□□□□ -0.57
PDPN-205ENST00000487038 EZH2Q15910 746 aaKnown RBP11.47□□□□□ -0.57
PDPN-205ENST00000487038 RGL3Q3MIN7 710 aa11.47□□□□□ -0.57
PDPN-205ENST00000487038 FAM182BQ5T319 152 aa11.45□□□□□ -0.58
PDPN-205ENST00000487038 FAM196AQ6ZSG2 479 aa11.45□□□□□ -0.58
PDPN-205ENST00000487038 PMFBP1Q8TBY8 1022 aa11.45□□□□□ -0.58
PDPN-205ENST00000487038 PPP1R1BQ9UD71 204 aaPredicted RBP11.45□□□□□ -0.58
PDPN-205ENST00000487038 PARP4Q9UKK3 1724 aaKnown RBP11.45□□□□□ -0.58
PDPN-205ENST00000487038 CAMTA1Q9Y6Y1 1673 aa11.44□□□□□ -0.58
PDPN-205ENST00000487038 NBPF8Q3BBV2 869 aa11.44□□□□□ -0.58
PDPN-205ENST00000487038 NBPF14Q5TI25 921 aa11.44□□□□□ -0.58
PDPN-205ENST00000487038 ATP7BP35670 1465 aa11.44□□□□□ -0.58
PDPN-205ENST00000487038 NINLQ9Y2I6 1382 aa11.43□□□□□ -0.58
PDPN-205ENST00000487038 TRIM37O94972 964 aa11.43□□□□□ -0.58
PDPN-205ENST00000487038 APBA3O96018 575 aa11.43□□□□□ -0.58
PDPN-205ENST00000487038 PRAM1Q96QH2 718 aa11.43□□□□□ -0.58
PDPN-205ENST00000487038 CAMKK2Q96RR4 588 aa11.43□□□□□ -0.58
PDPN-205ENST00000487038 PRDM11Q9NQV5 511 aa11.43□□□□□ -0.58
PDPN-205ENST00000487038 SBF2Q86WG5 1849 aa11.42□□□□□ -0.58
PDPN-205ENST00000487038 SPATA31A1Q5TZJ5 1347 aa11.42□□□□□ -0.58
PDPN-205ENST00000487038 SAFB2Q14151 953 aaKnown RBP eCLIP11.42□□□□□ -0.58
PDPN-205ENST00000487038 C14orf93Q9H972 538 aaKnown RBP11.42□□□□□ -0.58
PDPN-205ENST00000487038 POGKQ9P215 609 aa11.42□□□□□ -0.58
PDPN-205ENST00000487038 CHD4Q14839 1912 aa11.42□□□□□ -0.58
PDPN-205ENST00000487038 NRKQ7Z2Y5 1582 aa11.41□□□□□ -0.58
PDPN-205ENST00000487038 ACIN1Q9UKV3 1341 aaKnown RBP11.41□□□□□ -0.58
PDPN-205ENST00000487038 ARHGEF28Q8N1W1 1705 aaKnown RBP11.41□□□□□ -0.58
PDPN-205ENST00000487038 TOPAZ1Q8N9V7 1692 aa11.41□□□□□ -0.58
PDPN-205ENST00000487038 PPARGC1BQ86YN6 1023 aaKnown RBP11.41□□□□□ -0.58
PDPN-205ENST00000487038 SPON1Q9HCB6 807 aa11.41□□□□□ -0.58
PDPN-205ENST00000487038 WNK3Q9BYP7 1800 aa11.41□□□□□ -0.58
PDPN-205ENST00000487038 AKAP12Q02952 1782 aa11.41□□□□□ -0.58
PDPN-205ENST00000487038 CASZ1Q86V15 1759 aa11.41□□□□□ -0.58
PDPN-205ENST00000487038 PAK3O75914 559 aaPredicted RBP11.4□□□□□ -0.58
PDPN-205ENST00000487038 PDE3BQ13370 1112 aa11.4□□□□□ -0.58
PDPN-205ENST00000487038 ADGRB1O14514 1584 aa11.4□□□□□ -0.58
PDPN-205ENST00000487038 LMO7Q8WWI1 1683 aa11.4□□□□□ -0.59
PDPN-205ENST00000487038 STRN4Q9NRL3 753 aa11.39□□□□□ -0.59
PDPN-205ENST00000487038 KIAA0232Q92628 1395 aa11.39□□□□□ -0.59
PDPN-205ENST00000487038 SSH2Q76I76 1423 aa11.38□□□□□ -0.59
PDPN-205ENST00000487038 C11orf95C9JLR9 678 aaPredicted RBP11.38□□□□□ -0.59
PDPN-205ENST00000487038 KCNQ2O43526 872 aa11.38□□□□□ -0.59
PDPN-205ENST00000487038 CFAP70Q5T0N1 1121 aa11.38□□□□□ -0.59
PDPN-205ENST00000487038 NGDNQ8NEJ9 315 aaKnown RBP11.38□□□□□ -0.59
PDPN-205ENST00000487038 MYOM1P52179 1685 aa11.38□□□□□ -0.59
PDPN-205ENST00000487038 UTRNP46939 3433 aa11.38□□□□□ -0.59
PDPN-205ENST00000487038 BARGINQ6ZT62 677 aa11.37□□□□□ -0.59
PDPN-205ENST00000487038 MPHOSPH9Q99550 1183 aa11.37□□□□□ -0.59
PDPN-205ENST00000487038 LRRC37A3O60309 1634 aa11.37□□□□□ -0.59
PDPN-205ENST00000487038 PEAK1Q9H792 1746 aa11.37□□□□□ -0.59
PDPN-205ENST00000487038 EVA1CP58658 441 aa11.36□□□□□ -0.59
PDPN-205ENST00000487038 USP35Q9P2H5 1018 aa11.36□□□□□ -0.59
PDPN-205ENST00000487038 MINK1Q8N4C8 1332 aaPredicted RBP11.35□□□□□ -0.59
PDPN-205ENST00000487038 OVOS2A0A0G2JMS6 1433 aa11.35□□□□□ -0.59
PDPN-205ENST00000487038 OVOS2A0A0J9YW53 1432 aa11.35□□□□□ -0.59
PDPN-205ENST00000487038 OVOS2Q6IE36 1432 aa11.35□□□□□ -0.59
PDPN-205ENST00000487038 HIRIP3Q9BW71 556 aaPredicted RBP11.35□□□□□ -0.59
PDPN-205ENST00000487038 PRR36Q9H6K5 1346 aa11.35□□□□□ -0.59
PDPN-205ENST00000487038 WASLO00401 505 aaPredicted RBP11.34□□□□□ -0.59
PDPN-205ENST00000487038 CHRNA2Q15822 529 aa11.34□□□□□ -0.59
PDPN-205ENST00000487038 THRAP3Q9Y2W1 955 aaKnown RBP11.34□□□□□ -0.59
PDPN-205ENST00000487038 TCP11L2Q8N4U5 519 aa11.33□□□□□ -0.6
PDPN-205ENST00000487038 TRAK1Q9UPV9 953 aa11.33□□□□□ -0.6
PDPN-205ENST00000487038 ZC3H6P61129 1189 aaKnown RBP11.32□□□□□ -0.6
PDPN-205ENST00000487038 CPDO75976 1380 aa11.31□□□□□ -0.6
PDPN-205ENST00000487038 COL5A2P05997 1499 aaPredicted RBP11.31□□□□□ -0.6
PDPN-205ENST00000487038 CRB1P82279 1406 aa11.3□□□□□ -0.6
PDPN-205ENST00000487038 POLR3AO14802 1390 aaPredicted RBP11.29□□□□□ -0.6
PDPN-205ENST00000487038 KIAA1210Q9ULL0 1709 aa11.29□□□□□ -0.6
PDPN-205ENST00000487038 SENP3-EIF4A1A0A087X0R7 540 aa11.29□□□□□ -0.6
PDPN-205ENST00000487038 PLSCR1O15162 318 aa11.29□□□□□ -0.6
PDPN-205ENST00000487038 LARP1Q6PKG0 1096 aaKnown RBP11.29□□□□□ -0.6
PDPN-205ENST00000487038 CEP350Q5VT06 3117 aa11.29□□□□□ -0.6
PDPN-205ENST00000487038 QRICH2Q9H0J4 1663 aa11.29□□□□□ -0.6
PDPN-205ENST00000487038 ZNF784Q8NCA9 323 aaPredicted RBP11.28□□□□□ -0.6
PDPN-205ENST00000487038 NUDT16Q96DE0 195 aaKnown RBP11.28□□□□□ -0.6
PDPN-205ENST00000487038 NUTM2GQ5VZR2 741 aa11.27□□□□□ -0.61
PDPN-205ENST00000487038 ABTB2Q8N961 1025 aa11.27□□□□□ -0.61
PDPN-205ENST00000487038 NHSQ6T4R5 1651 aa11.27□□□□□ -0.61
PDPN-205ENST00000487038 RGPD5Q99666 1765 aa11.26□□□□□ -0.61
PDPN-205ENST00000487038 DDB1Q16531 1140 aa11.26□□□□□ -0.61
PDPN-205ENST00000487038 BCL11BQ9C0K0 894 aaPredicted RBP11.26□□□□□ -0.61
PDPN-205ENST00000487038 USP19O94966 1318 aa11.26□□□□□ -0.61
PDPN-205ENST00000487038 ACEP12821 1306 aa11.26□□□□□ -0.61
PDPN-205ENST00000487038 NLRP13Q86W25 1043 aa11.25□□□□□ -0.61
PDPN-205ENST00000487038 STAC3Q96MF2 364 aa11.25□□□□□ -0.61
PDPN-205ENST00000487038 ANO8Q9HCE9 1232 aaPredicted RBP11.25□□□□□ -0.61
PDPN-205ENST00000487038 QSER1Q2KHR3 1735 aa11.25□□□□□ -0.61
PDPN-205ENST00000487038 COL18A1P39060 1754 aa11.25□□□□□ -0.61
PDPN-205ENST00000487038 BRD4O60885 1362 aaPredicted RBP11.25□□□□□ -0.61
PDPN-205ENST00000487038 SLIT3O75094 1523 aa11.25□□□□□ -0.61
PDPN-205ENST00000487038 ZBTB7AO95365 584 aa11.24□□□□□ -0.61
PDPN-205ENST00000487038 STK32BQ9NY57 414 aa11.24□□□□□ -0.61
PDPN-205ENST00000487038 CCDC61Q9Y6R9 512 aa11.24□□□□□ -0.61
PDPN-205ENST00000487038 BCL9O00512 1426 aa11.24□□□□□ -0.61
PDPN-205ENST00000487038 PIK3C2AO00443 1686 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms