RNA–Protein interactions for RNA: ENST00000473480.5

A1CF-209, Transcript of APOBEC1 complementation factor, humanhuman

TSL 3

Gene A1CF, Length 813 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-209ENST00000473480 EMID1Q96A84 441 aaPredicted RBP13.29□□□□□ -0.28
A1CF-209ENST00000473480 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.29□□□□□ -0.28
A1CF-209ENST00000473480 SOCS7O14512 581 aa13.28□□□□□ -0.28
A1CF-209ENST00000473480 RPIAP49247 311 aa13.28□□□□□ -0.28
A1CF-209ENST00000473480 PTPRNQ16849 979 aa13.28□□□□□ -0.28
A1CF-209ENST00000473480 CCDC24Q8N4L8 307 aa13.28□□□□□ -0.28
A1CF-209ENST00000473480 PCMTD1Q96MG8 357 aaPredicted RBP13.28□□□□□ -0.28
A1CF-209ENST00000473480 NUDT12Q9BQG2 462 aa13.28□□□□□ -0.28
A1CF-209ENST00000473480 ERCC6L2Q5T890 1561 aa13.28□□□□□ -0.28
A1CF-209ENST00000473480 ZBTB24O43167 697 aaPredicted RBP13.27□□□□□ -0.29
A1CF-209ENST00000473480 RTL5Q5HYW3 569 aaPredicted RBP13.27□□□□□ -0.29
A1CF-209ENST00000473480 SPRYD7Q5W111 196 aa13.26□□□□□ -0.29
A1CF-209ENST00000473480 CCNYL3P0C7X3 344 aa13.25□□□□□ -0.29
A1CF-209ENST00000473480 HELBQ8NG08 1087 aaPredicted RBP13.25□□□□□ -0.29
A1CF-209ENST00000473480 TSC1Q92574 1164 aa13.25□□□□□ -0.29
A1CF-209ENST00000473480 CD2BP2O95400 341 aaKnown RBP13.24□□□□□ -0.29
A1CF-209ENST00000473480 PPP2R2DQ66LE6 453 aa13.24□□□□□ -0.29
A1CF-209ENST00000473480 LYPD8Q6UX82 237 aa13.24□□□□□ -0.29
A1CF-209ENST00000473480 ZNF598Q86UK7 904 aaKnown RBP13.23□□□□□ -0.29
A1CF-209ENST00000473480 EIF4G3O43432 1585 aaKnown RBP13.23□□□□□ -0.29
A1CF-209ENST00000473480 EVA1BQ9NVM1 165 aa13.21□□□□□ -0.29
A1CF-209ENST00000473480 CFTRP13569 1480 aa13.19□□□□□ -0.3
A1CF-209ENST00000473480 ZNF697Q5TEC3 545 aa13.19□□□□□ -0.3
A1CF-209ENST00000473480 KCNH2Q12809 1159 aa13.18□□□□□ -0.3
A1CF-209ENST00000473480 TRIM32Q13049 653 aa13.18□□□□□ -0.3
A1CF-209ENST00000473480 FBXO31Q5XUX0 539 aaPredicted RBP13.18□□□□□ -0.3
A1CF-209ENST00000473480 IRX2Q9BZI1 471 aaPredicted RBP13.18□□□□□ -0.3
A1CF-209ENST00000473480 PER1O15534 1290 aaPredicted RBP13.17□□□□□ -0.3
A1CF-209ENST00000473480 PTCRAQ6ISU1 281 aaPredicted RBP13.17□□□□□ -0.3
A1CF-209ENST00000473480 GAPVD1Q14C86 1478 aa13.16□□□□□ -0.3
A1CF-209ENST00000473480 HECW2Q9P2P5 1572 aa13.15□□□□□ -0.3
A1CF-209ENST00000473480 CLASP1Q7Z460 1538 aa13.15□□□□□ -0.3
A1CF-209ENST00000473480 CTHP32929 405 aa13.15□□□□□ -0.3
A1CF-209ENST00000473480 RFC5P40937 340 aa13.14□□□□□ -0.31
A1CF-209ENST00000473480 CTDSPL2Q05D32 466 aa13.14□□□□□ -0.31
A1CF-209ENST00000473480 UNC93B1Q9H1C4 597 aa13.14□□□□□ -0.31
A1CF-209ENST00000473480 AQRO60306 1485 aaKnown RBP eCLIP13.14□□□□□ -0.311e-6■□□□□ 10.6
A1CF-209ENST00000473480 MROH2BQ7Z745 1585 aa13.13□□□□□ -0.31
A1CF-209ENST00000473480 F12P00748 615 aaPredicted RBP13.13□□□□□ -0.31
A1CF-209ENST00000473480 AP1G2O75843 785 aa13.12□□□□□ -0.31
A1CF-209ENST00000473480 PDZRN3Q9UPQ7 1066 aa13.12□□□□□ -0.31
A1CF-209ENST00000473480 WNT7BP56706 349 aa13.11□□□□□ -0.31
A1CF-209ENST00000473480 LAPTM4AQ15012 233 aa13.11□□□□□ -0.31
A1CF-209ENST00000473480 ILDR2Q71H61 639 aa13.11□□□□□ -0.31
A1CF-209ENST00000473480 MAP10Q9P2G4 905 aa13.11□□□□□ -0.31
A1CF-209ENST00000473480 GFRA3O60609 400 aa13.1□□□□□ -0.31
A1CF-209ENST00000473480 TMEM259Q4ZIN3 620 aa13.1□□□□□ -0.31
A1CF-209ENST00000473480 KIF13AQ9H1H9 1805 aa13.1□□□□□ -0.31
A1CF-209ENST00000473480 SYNJ1O43426 1573 aa13.09□□□□□ -0.31
A1CF-209ENST00000473480 PRR20EP86478 221 aa13.09□□□□□ -0.31
A1CF-209ENST00000473480 PRR20CP86479 221 aa13.09□□□□□ -0.31
A1CF-209ENST00000473480 PRR20DP86480 221 aa13.09□□□□□ -0.31
A1CF-209ENST00000473480 PRR20BP86481 221 aa13.09□□□□□ -0.31
A1CF-209ENST00000473480 PRR20AP86496 221 aa13.09□□□□□ -0.31
A1CF-209ENST00000473480 TRIM67Q6ZTA4 783 aa13.09□□□□□ -0.31
A1CF-209ENST00000473480 GDF9O60383 454 aa13.08□□□□□ -0.32
A1CF-209ENST00000473480 FOXC1Q12948 553 aa13.08□□□□□ -0.32
A1CF-209ENST00000473480 PKD2L1Q9P0L9 805 aa13.08□□□□□ -0.32
A1CF-209ENST00000473480 WNT7AO00755 349 aa13.06□□□□□ -0.32
A1CF-209ENST00000473480 NRG2O14511 850 aaPredicted RBP13.06□□□□□ -0.32
A1CF-209ENST00000473480 USP17L8P0C7I0 530 aa13.06□□□□□ -0.32
A1CF-209ENST00000473480 SKOR1P84550 965 aa13.06□□□□□ -0.32
A1CF-209ENST00000473480 LRRN4Q8WUT4 740 aa13.06□□□□□ -0.32
A1CF-209ENST00000473480 CHMP7Q8WUX9 453 aaPredicted RBP13.06□□□□□ -0.32
A1CF-209ENST00000473480 TNFRSF10AO00220 468 aa13.05□□□□□ -0.32
A1CF-209ENST00000473480 ARMC2Q8NEN0 867 aa13.05□□□□□ -0.32
A1CF-209ENST00000473480 BAP1Q92560 729 aa13.05□□□□□ -0.32
A1CF-209ENST00000473480 SH3BP2P78314 561 aa13.04□□□□□ -0.32
A1CF-209ENST00000473480 TOPBP1Q92547 1522 aa13.03□□□□□ -0.32
A1CF-209ENST00000473480 LINC01559Q495D7 138 aa13.03□□□□□ -0.32
A1CF-209ENST00000473480 RC3H1Q5TC82 1133 aaKnown RBP13.03□□□□□ -0.32
A1CF-209ENST00000473480 ZNF511Q8NB15 262 aa13.03□□□□□ -0.32
A1CF-209ENST00000473480 DISP3Q9P2K9 1392 aa13.03□□□□□ -0.32
A1CF-209ENST00000473480 SYNJ2O15056 1496 aa13.03□□□□□ -0.32
A1CF-209ENST00000473480 KDM6BO15054 1643 aa13.01□□□□□ -0.33
A1CF-209ENST00000473480 FAM69CQ0P6D2 419 aa13□□□□□ -0.33
A1CF-209ENST00000473480 NBPF14Q5TI25 921 aa13□□□□□ -0.33
A1CF-209ENST00000473480 BANK1Q8NDB2 785 aa13□□□□□ -0.33
A1CF-209ENST00000473480 MRGPRX2Q96LB1 330 aa13□□□□□ -0.33
A1CF-209ENST00000473480 ABCC8Q09428 1581 aa12.99□□□□□ -0.33
A1CF-209ENST00000473480 ADGRL1O94910 1474 aa12.99□□□□□ -0.33
A1CF-209ENST00000473480 NR6A1Q15406 480 aa12.99□□□□□ -0.33
A1CF-209ENST00000473480 CYP4X1Q8N118 509 aa12.99□□□□□ -0.33
A1CF-209ENST00000473480 EHBP1Q8NDI1 1231 aa12.99□□□□□ -0.33
A1CF-209ENST00000473480 TARBP1Q13395 1621 aaKnown RBP12.99□□□□□ -0.33
A1CF-209ENST00000473480 HMX1Q9NP08 348 aaPredicted RBP12.98□□□□□ -0.33
A1CF-209ENST00000473480 GPKOWQ92917 476 aaPredicted RBP eCLIP12.97□□□□□ -0.33
A1CF-209ENST00000473480 TOR4AQ9NXH8 423 aa12.97□□□□□ -0.33
A1CF-209ENST00000473480 TTC24A2A3L6 582 aaPredicted RBP12.96□□□□□ -0.33
A1CF-209ENST00000473480 TMEM132AQ24JP5 1023 aa12.96□□□□□ -0.33
A1CF-209ENST00000473480 PNMA1Q8ND90 353 aa12.96□□□□□ -0.33
A1CF-209ENST00000473480 SNIP1Q8TAD8 396 aaKnown RBP12.96□□□□□ -0.33
A1CF-209ENST00000473480 FKBPLQ9UIM3 349 aa12.96□□□□□ -0.33
A1CF-209ENST00000473480 SNAPC4Q5SXM2 1469 aa12.96□□□□□ -0.34
A1CF-209ENST00000473480 Q6ZNB5 142 aa12.95□□□□□ -0.34
A1CF-209ENST00000473480 ZC3H4Q9UPT8 1303 aaKnown RBP12.94□□□□□ -0.34
A1CF-209ENST00000473480 PRDM2Q13029 1718 aa12.94□□□□□ -0.34
A1CF-209ENST00000473480 VARSP26640 1264 aaKnown RBP12.94□□□□□ -0.34
A1CF-209ENST00000473480 AGERQ15109 404 aa12.94□□□□□ -0.34
A1CF-209ENST00000473480 BPHLQ86WA6 291 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms