RNA–Protein interactions for RNA: ENST00000464729.1

NUP188-202, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 408 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-202ENST00000464729 CCDC24Q8N4L8 307 aa10.74□□□□□ -0.69
NUP188-202ENST00000464729 NUDT12Q9BQG2 462 aa10.74□□□□□ -0.69
NUP188-202ENST00000464729 PKD2L1Q9P0L9 805 aa10.74□□□□□ -0.69
NUP188-202ENST00000464729 CHMP7Q8WUX9 453 aaPredicted RBP10.73□□□□□ -0.69
NUP188-202ENST00000464729 RSPH6AQ9H0K4 717 aa10.73□□□□□ -0.69
NUP188-202ENST00000464729 CLK2P49760 499 aaKnown RBP10.72□□□□□ -0.69
NUP188-202ENST00000464729 PTPRNQ16849 979 aa10.72□□□□□ -0.69
NUP188-202ENST00000464729 CABLES1Q8TDN4 633 aa10.72□□□□□ -0.69
NUP188-202ENST00000464729 FAM117AQ9C073 453 aa10.72□□□□□ -0.69
NUP188-202ENST00000464729 CCDC88BA6NC98 1476 aa10.72□□□□□ -0.69
NUP188-202ENST00000464729 CFAP99D6REC4 459 aa10.71□□□□□ -0.69
NUP188-202ENST00000464729 TNFRSF10AO00220 468 aa10.71□□□□□ -0.69
NUP188-202ENST00000464729 CSPP1Q1MSJ5 1256 aa10.71□□□□□ -0.69
NUP188-202ENST00000464729 DDRGK1Q96HY6 314 aa10.71□□□□□ -0.69
NUP188-202ENST00000464729 LCE2BO14633 110 aa10.7□□□□□ -0.7
NUP188-202ENST00000464729 CCNYL3P0C7X3 344 aa10.7□□□□□ -0.7
NUP188-202ENST00000464729 QPCTQ16769 361 aa10.7□□□□□ -0.7
NUP188-202ENST00000464729 EIF4G3O43432 1585 aaKnown RBP10.69□□□□□ -0.7
NUP188-202ENST00000464729 TDRD9Q8NDG6 1382 aaKnown RBP10.69□□□□□ -0.7
NUP188-202ENST00000464729 PLEKHG3A1L390 1219 aa10.69□□□□□ -0.7
NUP188-202ENST00000464729 LILRB3O75022 631 aa10.69□□□□□ -0.7
NUP188-202ENST00000464729 FOXC1Q12948 553 aa10.69□□□□□ -0.7
NUP188-202ENST00000464729 TPRNQ4KMQ1 711 aa10.69□□□□□ -0.7
NUP188-202ENST00000464729 PTCRAQ6ISU1 281 aaPredicted RBP10.68□□□□□ -0.7
NUP188-202ENST00000464729 POLR3EQ9NVU0 708 aa10.68□□□□□ -0.7
NUP188-202ENST00000464729 SH3D19Q5HYK7 790 aa10.67□□□□□ -0.7
NUP188-202ENST00000464729 EVA1BQ9NVM1 165 aa10.67□□□□□ -0.7
NUP188-202ENST00000464729 SOGA1O94964 1423 aa10.67□□□□□ -0.7
NUP188-202ENST00000464729 WNT7AO00755 349 aa10.66□□□□□ -0.7
NUP188-202ENST00000464729 LYPD8Q6UX82 237 aa10.66□□□□□ -0.7
NUP188-202ENST00000464729 CHD1O14646 1710 aa10.66□□□□□ -0.7
NUP188-202ENST00000464729 DNMBPQ6XZF7 1577 aa10.65□□□□□ -0.7
NUP188-202ENST00000464729 NUTM2BA6NNL0 878 aaPredicted RBP10.65□□□□□ -0.7
NUP188-202ENST00000464729 NUTM2EB1AL46 878 aaPredicted RBP10.65□□□□□ -0.7
NUP188-202ENST00000464729 WNT7BP56706 349 aa10.65□□□□□ -0.7
NUP188-202ENST00000464729 SKOR1P84550 965 aa10.65□□□□□ -0.7
NUP188-202ENST00000464729 SKIV2LQ15477 1246 aaKnown RBP10.65□□□□□ -0.7
NUP188-202ENST00000464729 NUTM2DQ5VT03 806 aaPredicted RBP10.65□□□□□ -0.7
NUP188-202ENST00000464729 NUTM2AQ8IVF1 878 aaPredicted RBP10.65□□□□□ -0.7
NUP188-202ENST00000464729 TARBP1Q13395 1621 aaKnown RBP10.65□□□□□ -0.7
NUP188-202ENST00000464729 KCNH2Q12809 1159 aa10.64□□□□□ -0.71
NUP188-202ENST00000464729 NEUROD2Q15784 382 aa10.64□□□□□ -0.71
NUP188-202ENST00000464729 TRAF7Q6Q0C0 670 aa10.64□□□□□ -0.71
NUP188-202ENST00000464729 TOR4AQ9NXH8 423 aa10.64□□□□□ -0.71
NUP188-202ENST00000464729 POLA1P09884 1462 aaPredicted RBP10.63□□□□□ -0.71
NUP188-202ENST00000464729 RAD54L2Q9Y4B4 1467 aa10.63□□□□□ -0.71
NUP188-202ENST00000464729 DGAT1O75907 488 aa10.63□□□□□ -0.71
NUP188-202ENST00000464729 RTL5Q5HYW3 569 aaPredicted RBP10.63□□□□□ -0.71
NUP188-202ENST00000464729 UNC93B1Q9H1C4 597 aa10.63□□□□□ -0.71
NUP188-202ENST00000464729 PRDM2Q13029 1718 aa10.62□□□□□ -0.71
NUP188-202ENST00000464729 PKDCCQ504Y2 493 aa10.62□□□□□ -0.71
NUP188-202ENST00000464729 FAM187AA6NFU0 413 aa10.61□□□□□ -0.71
NUP188-202ENST00000464729 PER1O15534 1290 aaPredicted RBP10.61□□□□□ -0.71
NUP188-202ENST00000464729 F12P00748 615 aaPredicted RBP10.61□□□□□ -0.71
NUP188-202ENST00000464729 BRPF1P55201 1214 aaPredicted RBP10.61□□□□□ -0.71
NUP188-202ENST00000464729 CYP4X1Q8N118 509 aa10.61□□□□□ -0.71
NUP188-202ENST00000464729 MRGPRX2Q96LB1 330 aa10.61□□□□□ -0.71
NUP188-202ENST00000464729 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.61□□□□□ -0.71
NUP188-202ENST00000464729 RC3H1Q5TC82 1133 aaKnown RBP10.6□□□□□ -0.71
NUP188-202ENST00000464729 PROCA1Q8NCQ7 364 aaPredicted RBP10.6□□□□□ -0.71
NUP188-202ENST00000464729 CLASP1Q7Z460 1538 aa10.59□□□□□ -0.71
NUP188-202ENST00000464729 HELBQ8NG08 1087 aaPredicted RBP10.59□□□□□ -0.71
NUP188-202ENST00000464729 TSC1Q92574 1164 aa10.59□□□□□ -0.71
NUP188-202ENST00000464729 SNAPC4Q5SXM2 1469 aa10.59□□□□□ -0.71
NUP188-202ENST00000464729 GAPVD1Q14C86 1478 aa10.58□□□□□ -0.72
NUP188-202ENST00000464729 CTHP32929 405 aa10.58□□□□□ -0.72
NUP188-202ENST00000464729 SH3BP2P78314 561 aa10.58□□□□□ -0.72
NUP188-202ENST00000464729 FBXO31Q5XUX0 539 aaPredicted RBP10.58□□□□□ -0.72
NUP188-202ENST00000464729 MAP10Q9P2G4 905 aa10.58□□□□□ -0.72
NUP188-202ENST00000464729 SYNJ1O43426 1573 aa10.57□□□□□ -0.72
NUP188-202ENST00000464729 MYT1Q01538 1121 aa10.57□□□□□ -0.72
NUP188-202ENST00000464729 PPP2R2DQ66LE6 453 aa10.57□□□□□ -0.72
NUP188-202ENST00000464729 SNIP1Q8TAD8 396 aaKnown RBP10.57□□□□□ -0.72
NUP188-202ENST00000464729 MAGI1Q96QZ7 1491 aaPredicted RBP10.56□□□□□ -0.72
NUP188-202ENST00000464729 BAP1Q92560 729 aa10.56□□□□□ -0.72
NUP188-202ENST00000464729 GOPCQ9HD26 462 aa10.56□□□□□ -0.72
NUP188-202ENST00000464729 SYNJ2O15056 1496 aa10.55□□□□□ -0.72
NUP188-202ENST00000464729 GRIN2BQ13224 1484 aa10.55□□□□□ -0.72
NUP188-202ENST00000464729 TTC24A2A3L6 582 aaPredicted RBP10.55□□□□□ -0.72
NUP188-202ENST00000464729 LINC01559Q495D7 138 aa10.55□□□□□ -0.72
NUP188-202ENST00000464729 ZNF511Q8NB15 262 aa10.55□□□□□ -0.72
NUP188-202ENST00000464729 AVPP01185 164 aa10.54□□□□□ -0.72
NUP188-202ENST00000464729 SIAH2O43255 324 aa10.53□□□□□ -0.72
NUP188-202ENST00000464729 SMPD1P17405 629 aa10.53□□□□□ -0.72
NUP188-202ENST00000464729 EHBP1Q8NDI1 1231 aa10.53□□□□□ -0.72
NUP188-202ENST00000464729 CTDSPL2Q05D32 466 aa10.52□□□□□ -0.73
NUP188-202ENST00000464729 IL27Q8NEV9 243 aa10.52□□□□□ -0.73
NUP188-202ENST00000464729 FGD5Q6ZNL6 1462 aa10.51□□□□□ -0.73
NUP188-202ENST00000464729 J3QL48 77 aa10.51□□□□□ -0.73
NUP188-202ENST00000464729 CRIPAKQ8N1N5 446 aa10.51□□□□□ -0.73
NUP188-202ENST00000464729 WDR97A6NE52 1622 aa10.51□□□□□ -0.73
NUP188-202ENST00000464729 ATP1B4Q9UN42 357 aaPredicted RBP10.5□□□□□ -0.73
NUP188-202ENST00000464729 AAASQ9NRG9 546 aa10.49□□□□□ -0.73
NUP188-202ENST00000464729 ST8SIA5O15466 376 aa10.48□□□□□ -0.73
NUP188-202ENST00000464729 PCMTD1Q96MG8 357 aaPredicted RBP10.48□□□□□ -0.73
NUP188-202ENST00000464729 ALDH1A1P00352 501 aa10.47□□□□□ -0.73
NUP188-202ENST00000464729 VARSP26640 1264 aaKnown RBP10.47□□□□□ -0.73
NUP188-202ENST00000464729 SMCPP49901 116 aaPredicted RBP10.47□□□□□ -0.73
NUP188-202ENST00000464729 CTC1Q2NKJ3 1217 aa10.47□□□□□ -0.73
NUP188-202ENST00000464729 ARMC2Q8NEN0 867 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms