RNA–Protein interactions for RNA: ENST00000464729.1

NUP188-202, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 408 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-202ENST00000464729 AEBP2Q6ZN18 517 aaPredicted RBP28.29■■■□□ 2.12
NUP188-202ENST00000464729 CHIC1Q5VXU3 224 aa27.33■■□□□ 1.97
NUP188-202ENST00000464729 SENP3Q9H4L4 574 aaPredicted RBP24.04■■□□□ 1.44
NUP188-202ENST00000464729 PHF23Q9BUL5 403 aaPredicted RBP23.99■■□□□ 1.43
NUP188-202ENST00000464729 FOXD1Q16676 465 aa22.35■■□□□ 1.17
NUP188-202ENST00000464729 PLPPR3Q6T4P5 718 aa22.04■■□□□ 1.12
NUP188-202ENST00000464729 PPP6R1Q9UPN7 881 aa21.26■□□□□ 0.99
NUP188-202ENST00000464729 ADRA2BP18089 450 aa21.2■□□□□ 0.98
NUP188-202ENST00000464729 PIAS4Q8N2W9 510 aaPredicted RBP20.98■□□□□ 0.95
NUP188-202ENST00000464729 MSH5O43196 834 aa20.73■□□□□ 0.91
NUP188-202ENST00000464729 POTEDQ86YR6 584 aa19.42■□□□□ 0.7
NUP188-202ENST00000464729 SCAF1Q9H7N4 1312 aaKnown RBP19.4■□□□□ 0.7
NUP188-202ENST00000464729 PPP4R3CPQ6ZMV5 832 aa19.37■□□□□ 0.69
NUP188-202ENST00000464729 MAPK8IP2Q13387 824 aaPredicted RBP19.33■□□□□ 0.68
NUP188-202ENST00000464729 DMRT2Q9Y5R5 561 aa19.15■□□□□ 0.66
NUP188-202ENST00000464729 CNKSR2Q8WXI2 1034 aa18.9■□□□□ 0.62
NUP188-202ENST00000464729 NCBP3Q53F19 620 aaKnown RBP18.76■□□□□ 0.59
NUP188-202ENST00000464729 HOXD11P31277 338 aaPredicted RBP18.65■□□□□ 0.58
NUP188-202ENST00000464729 RNF216Q9NWF9 866 aaPredicted RBP18.62■□□□□ 0.57
NUP188-202ENST00000464729 KCNA4P22459 653 aa18.58■□□□□ 0.56
NUP188-202ENST00000464729 NPM3O75607 178 aaKnown RBP18.51■□□□□ 0.55
NUP188-202ENST00000464729 DCAF8L1A6NGE4 600 aa18.27■□□□□ 0.52
NUP188-202ENST00000464729 DNAJC5BQ9UF47 199 aa18.09■□□□□ 0.49
NUP188-202ENST00000464729 RNF39Q9H2S5 420 aa17.75■□□□□ 0.43
NUP188-202ENST00000464729 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.71■□□□□ 0.43
NUP188-202ENST00000464729 SLC4A1APQ9BWU0 796 aaKnown RBP17.62■□□□□ 0.41
NUP188-202ENST00000464729 SLC4A2P04920 1241 aa17.57■□□□□ 0.4
NUP188-202ENST00000464729 C1QBPQ07021 282 aaKnown RBP17.51■□□□□ 0.39
NUP188-202ENST00000464729 CACNB1Q02641 598 aaPredicted RBP17.46■□□□□ 0.39
NUP188-202ENST00000464729 U3KPZ7 1027 aaPredicted RBP17.43■□□□□ 0.38
NUP188-202ENST00000464729 FOXD4L1Q9NU39 408 aa17.2■□□□□ 0.34
NUP188-202ENST00000464729 ZBTB22O15209 634 aa17.11■□□□□ 0.33
NUP188-202ENST00000464729 MYCNP04198 464 aaPredicted RBP17.11■□□□□ 0.33
NUP188-202ENST00000464729 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.09■□□□□ 0.33
NUP188-202ENST00000464729 HNRNPUL2Q1KMD3 747 aaKnown RBP17.09■□□□□ 0.33
NUP188-202ENST00000464729 SAMD1Q6SPF0 538 aaPredicted RBP17.02■□□□□ 0.32
NUP188-202ENST00000464729 SPINK5Q9NQ38 1064 aaPredicted RBP17.02■□□□□ 0.32
NUP188-202ENST00000464729 APLP2Q06481 763 aa16.98■□□□□ 0.31
NUP188-202ENST00000464729 CAPN15O75808 1086 aa16.94■□□□□ 0.3
NUP188-202ENST00000464729 ZNF219Q9P2Y4 722 aaPredicted RBP16.81■□□□□ 0.28
NUP188-202ENST00000464729 TRHP20396 242 aaPredicted RBP16.78■□□□□ 0.28
NUP188-202ENST00000464729 DSG3P32926 999 aa16.77■□□□□ 0.28
NUP188-202ENST00000464729 CSRNP3Q8WYN3 585 aa16.74■□□□□ 0.27
NUP188-202ENST00000464729 EHMT2Q96KQ7 1210 aa16.74■□□□□ 0.27
NUP188-202ENST00000464729 ATF5Q9Y2D1 282 aaPredicted RBP16.67■□□□□ 0.26
NUP188-202ENST00000464729 ATXN8OSP0DMR3 200 aa16.63■□□□□ 0.25
NUP188-202ENST00000464729 ABCB7O75027 752 aa16.6■□□□□ 0.25
NUP188-202ENST00000464729 POLA2Q14181 598 aa16.46■□□□□ 0.23
NUP188-202ENST00000464729 ZBTB12Q9Y330 459 aaPredicted RBP16.19■□□□□ 0.18
NUP188-202ENST00000464729 RBM42Q9BTD8 480 aaKnown RBP15.98■□□□□ 0.15
NUP188-202ENST00000464729 FBLN2P98095 1184 aa15.97■□□□□ 0.15
NUP188-202ENST00000464729 MKRN4PQ13434 485 aaPredicted RBP15.95■□□□□ 0.14
NUP188-202ENST00000464729 OSCARQ8IYS5 282 aa15.93■□□□□ 0.14
NUP188-202ENST00000464729 SPDYE2BA6NHP3 402 aa15.73■□□□□ 0.11
NUP188-202ENST00000464729 SPDYE6P0CI01 402 aa15.73■□□□□ 0.11
NUP188-202ENST00000464729 SPDYE2Q495Y8 402 aa15.73■□□□□ 0.11
NUP188-202ENST00000464729 AKT1S1Q96B36 256 aa15.72■□□□□ 0.11
NUP188-202ENST00000464729 SSUH2Q9Y2M2 353 aa15.6■□□□□ 0.09
NUP188-202ENST00000464729 ZNF692Q9BU19 519 aaPredicted RBP15.59■□□□□ 0.09
NUP188-202ENST00000464729 REM2Q8IYK8 340 aaPredicted RBP15.56■□□□□ 0.08
NUP188-202ENST00000464729 CHRDL2Q6WN34 429 aa15.44■□□□□ 0.06
NUP188-202ENST00000464729 SPDYE4A6NLX3 237 aa15.41■□□□□ 0.06
NUP188-202ENST00000464729 PITPNM1O00562 1244 aa15.4■□□□□ 0.06
NUP188-202ENST00000464729 PABPN1Q86U42 306 aaKnown RBP eCLIP15.38■□□□□ 0.05
NUP188-202ENST00000464729 SPDYE1Q8NFV5 336 aaPredicted RBP15.32■□□□□ 0.04
NUP188-202ENST00000464729 POTEHQ6S545 545 aa15.31■□□□□ 0.04
NUP188-202ENST00000464729 CLEC11AQ9Y240 323 aa15.24■□□□□ 0.03
NUP188-202ENST00000464729 FXR2P51116 673 aaKnown RBP eCLIP15.18■□□□□ 0.02
NUP188-202ENST00000464729 PROM2Q8N271 834 aa15.18■□□□□ 0.02
NUP188-202ENST00000464729 PIP4P2Q8N4L2 257 aa15.18■□□□□ 0.02
NUP188-202ENST00000464729 FKBP8Q14318 412 aa15.12■□□□□ 0.01
NUP188-202ENST00000464729 PRR29P0C7W0 189 aa15.07■□□□□ 0
NUP188-202ENST00000464729 STAG3Q9UJ98 1225 aa15.07■□□□□ 0
NUP188-202ENST00000464729 PRKAR2AP13861 404 aaKnown RBP14.99□□□□□ -0.01
NUP188-202ENST00000464729 CHADLQ6NUI6 762 aa14.92□□□□□ -0.02
NUP188-202ENST00000464729 CREBZFQ9NS37 354 aa14.84□□□□□ -0.03
NUP188-202ENST00000464729 FARP1Q9Y4F1 1045 aaPredicted RBP14.76□□□□□ -0.05
NUP188-202ENST00000464729 HAX1O00165 279 aa14.74□□□□□ -0.05
NUP188-202ENST00000464729 FBXO3Q9UK99 471 aa14.68□□□□□ -0.06
NUP188-202ENST00000464729 C19orf67A6NJJ6 358 aa14.67□□□□□ -0.06
NUP188-202ENST00000464729 MNX1P50219 401 aaPredicted RBP14.67□□□□□ -0.06
NUP188-202ENST00000464729 EVX2Q03828 476 aa14.63□□□□□ -0.07
NUP188-202ENST00000464729 MIER1Q8N108 512 aa14.62□□□□□ -0.07
NUP188-202ENST00000464729 SP7Q8TDD2 431 aaPredicted RBP14.58□□□□□ -0.08
NUP188-202ENST00000464729 PLEKHG5O94827 1062 aa14.57□□□□□ -0.08
NUP188-202ENST00000464729 PLCD3Q8N3E9 789 aa14.57□□□□□ -0.08
NUP188-202ENST00000464729 NPM1P06748 294 aaKnown RBP eCLIP14.56□□□□□ -0.08
NUP188-202ENST00000464729 CD44P16070 742 aaKnown RBP14.54□□□□□ -0.08
NUP188-202ENST00000464729 VASPP50552 380 aaPredicted RBP14.5□□□□□ -0.09
NUP188-202ENST00000464729 ZBTB47Q9UFB7 747 aaPredicted RBP14.45□□□□□ -0.1
NUP188-202ENST00000464729 NISCHQ9Y2I1 1504 aa14.43□□□□□ -0.1
NUP188-202ENST00000464729 ZRANB1Q9UGI0 708 aa14.41□□□□□ -0.1
NUP188-202ENST00000464729 PAK3O75914 559 aaPredicted RBP14.38□□□□□ -0.11
NUP188-202ENST00000464729 ZNF579Q8NAF0 562 aaKnown RBP14.38□□□□□ -0.11
NUP188-202ENST00000464729 NUBP1P53384 320 aa14.33□□□□□ -0.12
NUP188-202ENST00000464729 RASEFQ8IZ41 740 aa14.33□□□□□ -0.12
NUP188-202ENST00000464729 GABBR2O75899 941 aa14.32□□□□□ -0.12
NUP188-202ENST00000464729 TSPYL2Q9H2G4 693 aaPredicted RBP14.3□□□□□ -0.12
NUP188-202ENST00000464729 IFNLR1Q8IU57 520 aaPredicted RBP14.29□□□□□ -0.12
NUP188-202ENST00000464729 CLCN6P51797 869 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms