RNA–Protein interactions for RNA: ENST00000462267.1

APP-211, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-211ENST00000462267 GPRASP1Q5JY77 1395 aa22.91■■□□□ 1.26
APP-211ENST00000462267 DHX57Q6P158 1386 aaKnown RBP22.91■■□□□ 1.26
APP-211ENST00000462267 NBPF8Q3BBV2 869 aa22.9■■□□□ 1.26
APP-211ENST00000462267 NBPF14Q5TI25 921 aa22.9■■□□□ 1.26
APP-211ENST00000462267 PPARGC1BQ86YN6 1023 aaKnown RBP22.9■■□□□ 1.26
APP-211ENST00000462267 PRAM1Q96QH2 718 aa22.9■■□□□ 1.26
APP-211ENST00000462267 SPATA31A1Q5TZJ5 1347 aa22.89■■□□□ 1.26
APP-211ENST00000462267 SAFB2Q14151 953 aaKnown RBP eCLIP22.89■■□□□ 1.25
APP-211ENST00000462267 PRDM11Q9NQV5 511 aa22.89■■□□□ 1.25
APP-211ENST00000462267 TRPM3Q9HCF6 1732 aaPredicted RBP22.88■■□□□ 1.25
APP-211ENST00000462267 SPON1Q9HCB6 807 aa22.87■■□□□ 1.25
APP-211ENST00000462267 PPP1R1BQ9UD71 204 aaPredicted RBP22.87■■□□□ 1.25
APP-211ENST00000462267 ALS2Q96Q42 1657 aa22.87■■□□□ 1.25
APP-211ENST00000462267 ACIN1Q9UKV3 1341 aaKnown RBP22.85■■□□□ 1.25
APP-211ENST00000462267 POGKQ9P215 609 aa22.85■■□□□ 1.25
APP-211ENST00000462267 NINLQ9Y2I6 1382 aa22.85■■□□□ 1.25
APP-211ENST00000462267 CFAP70Q5T0N1 1121 aa22.84■■□□□ 1.25
APP-211ENST00000462267 KCNQ2O43526 872 aa22.83■■□□□ 1.25
APP-211ENST00000462267 RREB1Q92766 1687 aa22.82■■□□□ 1.24
APP-211ENST00000462267 EIF3AQ14152 1382 aaKnown RBP22.82■■□□□ 1.24
APP-211ENST00000462267 DLC1Q96QB1 1528 aa22.82■■□□□ 1.24
APP-211ENST00000462267 PDE3BQ13370 1112 aa22.81■■□□□ 1.24
APP-211ENST00000462267 BARGINQ6ZT62 677 aa22.8■■□□□ 1.24
APP-211ENST00000462267 STRN4Q9NRL3 753 aa22.8■■□□□ 1.24
APP-211ENST00000462267 NUP188Q5SRE5 1749 aa22.79■■□□□ 1.24
APP-211ENST00000462267 KIAA0232Q92628 1395 aa22.79■■□□□ 1.24
APP-211ENST00000462267 PAK3O75914 559 aaPredicted RBP22.79■■□□□ 1.24
APP-211ENST00000462267 NGDNQ8NEJ9 315 aaKnown RBP22.79■■□□□ 1.24
APP-211ENST00000462267 CRYBG1Q9Y4K1 1723 aa22.79■■□□□ 1.24
APP-211ENST00000462267 PRR36Q9H6K5 1346 aa22.78■■□□□ 1.24
APP-211ENST00000462267 CHRNA2Q15822 529 aa22.77■■□□□ 1.24
APP-211ENST00000462267 MPHOSPH9Q99550 1183 aa22.77■■□□□ 1.24
APP-211ENST00000462267 HIRIP3Q9BW71 556 aaPredicted RBP22.76■■□□□ 1.23
APP-211ENST00000462267 USP35Q9P2H5 1018 aa22.76■■□□□ 1.23
APP-211ENST00000462267 TULP4Q9NRJ4 1543 aa22.75■■□□□ 1.23
APP-211ENST00000462267 EVA1CP58658 441 aa22.74■■□□□ 1.23
APP-211ENST00000462267 C11orf95C9JLR9 678 aaPredicted RBP22.73■■□□□ 1.23
APP-211ENST00000462267 WASLO00401 505 aaPredicted RBP22.73■■□□□ 1.23
APP-211ENST00000462267 ZC3H6P61129 1189 aaKnown RBP22.72■■□□□ 1.23
APP-211ENST00000462267 MINK1Q8N4C8 1332 aaPredicted RBP22.72■■□□□ 1.23
APP-211ENST00000462267 SSH2Q76I76 1423 aa22.72■■□□□ 1.23
APP-211ENST00000462267 TCP11L2Q8N4U5 519 aa22.71■■□□□ 1.23
APP-211ENST00000462267 ZNF784Q8NCA9 323 aaPredicted RBP22.7■■□□□ 1.22
APP-211ENST00000462267 TRAK1Q9UPV9 953 aa22.7■■□□□ 1.22
APP-211ENST00000462267 THRAP3Q9Y2W1 955 aaKnown RBP22.69■■□□□ 1.22
APP-211ENST00000462267 ATP7BP35670 1465 aa22.67■■□□□ 1.22
APP-211ENST00000462267 LARP1Q6PKG0 1096 aaKnown RBP22.67■■□□□ 1.22
APP-211ENST00000462267 ADGRB1O14514 1584 aa22.67■■□□□ 1.22
APP-211ENST00000462267 PLSCR1O15162 318 aa22.66■■□□□ 1.22
APP-211ENST00000462267 CAMTA1Q9Y6Y1 1673 aa22.65■■□□□ 1.22
APP-211ENST00000462267 PHRF1Q9P1Y6 1649 aaKnown RBP22.65■■□□□ 1.22
APP-211ENST00000462267 NUTM2GQ5VZR2 741 aa22.63■■□□□ 1.21
APP-211ENST00000462267 SENP3-EIF4A1A0A087X0R7 540 aa22.62■■□□□ 1.21
APP-211ENST00000462267 NUDT16Q96DE0 195 aaKnown RBP22.62■■□□□ 1.21
APP-211ENST00000462267 CPDO75976 1380 aa22.62■■□□□ 1.21
APP-211ENST00000462267 OVOS2A0A0G2JMS6 1433 aa22.6■■□□□ 1.21
APP-211ENST00000462267 OVOS2A0A0J9YW53 1432 aa22.6■■□□□ 1.21
APP-211ENST00000462267 OVOS2Q6IE36 1432 aa22.6■■□□□ 1.21
APP-211ENST00000462267 ANO8Q9HCE9 1232 aaPredicted RBP22.6■■□□□ 1.21
APP-211ENST00000462267 RGPD3A6NKT7 1758 aaPredicted RBP22.6■■□□□ 1.21
APP-211ENST00000462267 RGPD4Q7Z3J3 1758 aa22.6■■□□□ 1.21
APP-211ENST00000462267 NRKQ7Z2Y5 1582 aa22.59■■□□□ 1.21
APP-211ENST00000462267 ITSN1Q15811 1721 aa22.59■■□□□ 1.21
APP-211ENST00000462267 PARP4Q9UKK3 1724 aaKnown RBP22.58■■□□□ 1.21
APP-211ENST00000462267 PTGER2P43116 358 aa22.58■■□□□ 1.21
APP-211ENST00000462267 C1QTNF8P60827 252 aa22.58■■□□□ 1.21
APP-211ENST00000462267 CASZ1Q86V15 1759 aa22.58■■□□□ 1.2
APP-211ENST00000462267 ZBTB7AO95365 584 aa22.57■■□□□ 1.2
APP-211ENST00000462267 BCL11BQ9C0K0 894 aaPredicted RBP22.57■■□□□ 1.2
APP-211ENST00000462267 POLR3AO14802 1390 aaPredicted RBP22.57■■□□□ 1.2
APP-211ENST00000462267 LMO7Q8WWI1 1683 aa22.57■■□□□ 1.2
APP-211ENST00000462267 ABTB2Q8N961 1025 aa22.56■■□□□ 1.2
APP-211ENST00000462267 PDGFDQ9GZP0 370 aaPredicted RBP22.56■■□□□ 1.2
APP-211ENST00000462267 IFFO2Q5TF58 517 aa22.55■■□□□ 1.2
APP-211ENST00000462267 USP19O94966 1318 aa22.55■■□□□ 1.2
APP-211ENST00000462267 ACEP12821 1306 aa22.55■■□□□ 1.2
APP-211ENST00000462267 PEAK1Q9H792 1746 aa22.54■■□□□ 1.2
APP-211ENST00000462267 SYT17Q9BSW7 474 aa22.54■■□□□ 1.2
APP-211ENST00000462267 COL5A2P05997 1499 aaPredicted RBP22.54■■□□□ 1.2
APP-211ENST00000462267 ATF5Q9Y2D1 282 aaPredicted RBP22.53■■□□□ 1.2
APP-211ENST00000462267 CCDC61Q9Y6R9 512 aa22.53■■□□□ 1.2
APP-211ENST00000462267 CRB1P82279 1406 aa22.53■■□□□ 1.2
APP-211ENST00000462267 UTRNP46939 3433 aa22.53■■□□□ 1.2
APP-211ENST00000462267 GCP02774 474 aa22.52■■□□□ 1.2
APP-211ENST00000462267 DDB1Q16531 1140 aa22.52■■□□□ 1.2
APP-211ENST00000462267 NLRP13Q86W25 1043 aa22.52■■□□□ 1.2
APP-211ENST00000462267 PROM2Q8N271 834 aa22.52■■□□□ 1.2
APP-211ENST00000462267 FHDC1Q9C0D6 1143 aaPredicted RBP22.52■■□□□ 1.2
APP-211ENST00000462267 MYOM1P52179 1685 aa22.52■■□□□ 1.2
APP-211ENST00000462267 PLEKHG3A1L390 1219 aa22.51■■□□□ 1.19
APP-211ENST00000462267 CDK19Q9BWU1 502 aa22.51■■□□□ 1.19
APP-211ENST00000462267 STAC3Q96MF2 364 aa22.49■■□□□ 1.19
APP-211ENST00000462267 STK32BQ9NY57 414 aa22.49■■□□□ 1.19
APP-211ENST00000462267 SBF2Q86WG5 1849 aa22.49■■□□□ 1.19
APP-211ENST00000462267 PTF1AQ7RTS3 328 aa22.48■■□□□ 1.19
APP-211ENST00000462267 KDM2AQ9Y2K7 1162 aa22.48■■□□□ 1.19
APP-211ENST00000462267 BCL9O00512 1426 aa22.48■■□□□ 1.19
APP-211ENST00000462267 CHD4Q14839 1912 aa22.47■■□□□ 1.19
APP-211ENST00000462267 MTFR1LQ9H019 292 aa22.47■■□□□ 1.19
APP-211ENST00000462267 SLC15A2Q16348 729 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms