RNA–Protein interactions for RNA: ENST00000461004.1

RTN4-212, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 422 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-212ENST00000461004 TBX22Q9Y458 520 aa10.62□□□□□ -0.71
RTN4-212ENST00000461004 NRXN3Q9Y4C0 1643 aa10.62□□□□□ -0.71
RTN4-212ENST00000461004 PTPRUQ92729 1446 aa10.61□□□□□ -0.71
RTN4-212ENST00000461004 POTEB2H3BUK9 544 aa10.61□□□□□ -0.71
RTN4-212ENST00000461004 PDE4AP27815 886 aa10.61□□□□□ -0.71
RTN4-212ENST00000461004 DCAF11Q8TEB1 546 aa10.61□□□□□ -0.71
RTN4-212ENST00000461004 METP08581 1390 aa10.61□□□□□ -0.71
RTN4-212ENST00000461004 PPLO60437 1756 aa10.6□□□□□ -0.71
RTN4-212ENST00000461004 KCNA6P17658 529 aa10.6□□□□□ -0.71
RTN4-212ENST00000461004 KCNV2Q8TDN2 545 aa10.6□□□□□ -0.71
RTN4-212ENST00000461004 GPHNQ9NQX3 736 aaPredicted RBP10.6□□□□□ -0.71
RTN4-212ENST00000461004 KIF3CO14782 793 aa10.59□□□□□ -0.71
RTN4-212ENST00000461004 CFAP70Q5T0N1 1121 aa10.59□□□□□ -0.71
RTN4-212ENST00000461004 TMEM132EQ6IEE7 984 aa10.59□□□□□ -0.71
RTN4-212ENST00000461004 L3MBTL2Q969R5 705 aa10.59□□□□□ -0.71
RTN4-212ENST00000461004 WDR70Q9NW82 654 aa10.59□□□□□ -0.71
RTN4-212ENST00000461004 SETBP1Q9Y6X0 1596 aa10.59□□□□□ -0.71
RTN4-212ENST00000461004 AMOTL2Q9Y2J4 779 aa10.58□□□□□ -0.72
RTN4-212ENST00000461004 IFT172Q9UG01 1749 aa10.58□□□□□ -0.72
RTN4-212ENST00000461004 C2orf72A6NCS6 295 aa10.57□□□□□ -0.72
RTN4-212ENST00000461004 DSG2Q14126 1118 aa10.57□□□□□ -0.72
RTN4-212ENST00000461004 PROSER2Q86WR7 435 aaPredicted RBP10.57□□□□□ -0.72
RTN4-212ENST00000461004 DDX27Q96GQ7 796 aaKnown RBP10.57□□□□□ -0.72
RTN4-212ENST00000461004 ALKQ9UM73 1620 aa10.57□□□□□ -0.72
RTN4-212ENST00000461004 LRRC7Q96NW7 1537 aa10.57□□□□□ -0.72
RTN4-212ENST00000461004 G3V3G9 751 aa10.56□□□□□ -0.72
RTN4-212ENST00000461004 C14orf93Q9H972 538 aaKnown RBP10.56□□□□□ -0.72
RTN4-212ENST00000461004 PIK3C2GO75747 1445 aa10.56□□□□□ -0.72
RTN4-212ENST00000461004 NRXN1Q9ULB1 1477 aa10.55□□□□□ -0.72
RTN4-212ENST00000461004 STK26Q9P289 416 aa10.55□□□□□ -0.72
RTN4-212ENST00000461004 CHD2O14647 1828 aaKnown RBP10.55□□□□□ -0.72
RTN4-212ENST00000461004 MYOM2P54296 1465 aa10.55□□□□□ -0.72
RTN4-212ENST00000461004 TMEM94Q12767 1356 aa10.54□□□□□ -0.72
RTN4-212ENST00000461004 CPS1P31327 1500 aa10.54□□□□□ -0.72
RTN4-212ENST00000461004 SETD1AO15047 1707 aaKnown RBP10.54□□□□□ -0.72
RTN4-212ENST00000461004 E2F4Q16254 413 aa10.54□□□□□ -0.72
RTN4-212ENST00000461004 PPP1R15BQ5SWA1 713 aa10.54□□□□□ -0.72
RTN4-212ENST00000461004 ASXL1Q8IXJ9 1541 aa10.53□□□□□ -0.72
RTN4-212ENST00000461004 PIK3R4Q99570 1358 aa10.53□□□□□ -0.72
RTN4-212ENST00000461004 DIP2AQ14689 1571 aa10.53□□□□□ -0.72
RTN4-212ENST00000461004 NWD1Q149M9 1564 aa10.53□□□□□ -0.72
RTN4-212ENST00000461004 NBPF1Q3BBV0 1214 aa10.53□□□□□ -0.72
RTN4-212ENST00000461004 CCER1Q8TC90 406 aaPredicted RBP10.53□□□□□ -0.72
RTN4-212ENST00000461004 TMC2Q8TDI7 906 aa10.53□□□□□ -0.72
RTN4-212ENST00000461004 ROBO2Q9HCK4 1378 aa10.52□□□□□ -0.72
RTN4-212ENST00000461004 CAMK2BQ13554 666 aa10.52□□□□□ -0.73
RTN4-212ENST00000461004 NBPF8Q3BBV2 869 aa10.52□□□□□ -0.73
RTN4-212ENST00000461004 WAPLQ7Z5K2 1190 aa10.52□□□□□ -0.73
RTN4-212ENST00000461004 XIRP1Q702N8 1843 aaKnown RBP10.51□□□□□ -0.73
RTN4-212ENST00000461004 UBAP1LF5GYI3 381 aa10.51□□□□□ -0.73
RTN4-212ENST00000461004 FOXK1P85037 733 aa10.51□□□□□ -0.73
RTN4-212ENST00000461004 PRAG1Q86YV5 1406 aa10.5□□□□□ -0.73
RTN4-212ENST00000461004 FBXO41Q8TF61 875 aa10.5□□□□□ -0.73
RTN4-212ENST00000461004 LRPPRCP42704 1394 aaKnown RBP10.5□□□□□ -0.73
RTN4-212ENST00000461004 PLEKHH1Q9ULM0 1364 aa10.5□□□□□ -0.73
RTN4-212ENST00000461004 XRN1Q8IZH2 1706 aaKnown RBP10.5□□□□□ -0.73
RTN4-212ENST00000461004 NKTRP30414 1462 aaKnown RBP10.49□□□□□ -0.73
RTN4-212ENST00000461004 PIP4K2BP78356 416 aa10.49□□□□□ -0.73
RTN4-212ENST00000461004 C3orf67Q6ZVT6 689 aa10.49□□□□□ -0.73
RTN4-212ENST00000461004 STAC3Q96MF2 364 aa10.49□□□□□ -0.73
RTN4-212ENST00000461004 EMILIN3Q9NT22 766 aa10.49□□□□□ -0.73
RTN4-212ENST00000461004 TRAK1Q9UPV9 953 aa10.49□□□□□ -0.73
RTN4-212ENST00000461004 YTHDC2Q9H6S0 1430 aaKnown RBP10.49□□□□□ -0.73
RTN4-212ENST00000461004 SAFB2Q14151 953 aaKnown RBP eCLIP10.48□□□□□ -0.73
RTN4-212ENST00000461004 C14orf37Q86TY3 774 aa10.48□□□□□ -0.73
RTN4-212ENST00000461004 PLPP6Q8IY26 295 aa10.48□□□□□ -0.73
RTN4-212ENST00000461004 TONSLQ96HA7 1378 aa10.48□□□□□ -0.73
RTN4-212ENST00000461004 ABCC11Q96J66 1382 aa10.48□□□□□ -0.73
RTN4-212ENST00000461004 IQSEC2Q5JU85 1478 aa10.48□□□□□ -0.73
RTN4-212ENST00000461004 ADGRB1O14514 1584 aa10.48□□□□□ -0.73
RTN4-212ENST00000461004 TOM1O60784 492 aa10.46□□□□□ -0.73
RTN4-212ENST00000461004 PRAM1Q96QH2 718 aa10.46□□□□□ -0.73
RTN4-212ENST00000461004 C19orf44Q9H6X5 657 aa10.46□□□□□ -0.73
RTN4-212ENST00000461004 TECPR2O15040 1411 aa10.45□□□□□ -0.74
RTN4-212ENST00000461004 PTCH1Q13635 1447 aa10.45□□□□□ -0.74
RTN4-212ENST00000461004 MSH6P52701 1360 aa10.45□□□□□ -0.74
RTN4-212ENST00000461004 ARHGEF1Q92888 912 aaKnown RBP10.45□□□□□ -0.74
RTN4-212ENST00000461004 CLSPNQ9HAW4 1339 aa10.44□□□□□ -0.74
RTN4-212ENST00000461004 NBR1Q14596 966 aa10.44□□□□□ -0.74
RTN4-212ENST00000461004 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.44□□□□□ -0.74
RTN4-212ENST00000461004 NCOA3Q9Y6Q9 1424 aa10.43□□□□□ -0.74
RTN4-212ENST00000461004 NUTM2FA1L443 756 aa10.43□□□□□ -0.74
RTN4-212ENST00000461004 SIRT1Q96EB6 747 aa10.43□□□□□ -0.74
RTN4-212ENST00000461004 POGKQ9P215 609 aa10.43□□□□□ -0.74
RTN4-212ENST00000461004 SLAIN2Q9P270 581 aa10.43□□□□□ -0.74
RTN4-212ENST00000461004 ARIH1Q9Y4X5 557 aaPredicted RBP10.43□□□□□ -0.74
RTN4-212ENST00000461004 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.43□□□□□ -0.74
RTN4-212ENST00000461004 LAMC1P11047 1609 aa10.43□□□□□ -0.74
RTN4-212ENST00000461004 ADGRL3Q9HAR2 1447 aa10.42□□□□□ -0.74
RTN4-212ENST00000461004 MINK1Q8N4C8 1332 aaPredicted RBP10.42□□□□□ -0.74
RTN4-212ENST00000461004 ATF3P18847 181 aa10.42□□□□□ -0.74
RTN4-212ENST00000461004 HIRIP3Q9BW71 556 aaPredicted RBP10.42□□□□□ -0.74
RTN4-212ENST00000461004 FAM135BQ49AJ0 1406 aa10.41□□□□□ -0.74
RTN4-212ENST00000461004 NALCNQ8IZF0 1738 aa10.41□□□□□ -0.74
RTN4-212ENST00000461004 HSPA1LP34931 641 aa10.41□□□□□ -0.74
RTN4-212ENST00000461004 KNDC1Q76NI1 1749 aa10.41□□□□□ -0.74
RTN4-212ENST00000461004 ROCK2O75116 1388 aaKnown RBP10.4□□□□□ -0.74
RTN4-212ENST00000461004 TRPM1Q7Z4N2 1603 aa10.4□□□□□ -0.74
RTN4-212ENST00000461004 DPYSL4O14531 572 aa10.4□□□□□ -0.74
RTN4-212ENST00000461004 DDX17Q92841 729 aaKnown RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms