RNA–Protein interactions for RNA: ENST00000459909.1

TMEM50B-205, Transcript of transmembrane protein 50B, humanhuman

TSL 2

Gene TMEM50B, Length 618 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-205ENST00000459909 FAM196AQ6ZSG2 479 aa24.71■■□□□ 1.55
TMEM50B-205ENST00000459909 TNS1Q9HBL0 1735 aaKnown RBP24.71■■□□□ 1.55
TMEM50B-205ENST00000459909 CFAP70Q5T0N1 1121 aa24.7■■□□□ 1.54
TMEM50B-205ENST00000459909 TRIM37O94972 964 aa24.69■■□□□ 1.54
TMEM50B-205ENST00000459909 POGKQ9P215 609 aa24.69■■□□□ 1.54
TMEM50B-205ENST00000459909 TRPM3Q9HCF6 1732 aaPredicted RBP24.69■■□□□ 1.54
TMEM50B-205ENST00000459909 ACIN1Q9UKV3 1341 aaKnown RBP24.67■■□□□ 1.54
TMEM50B-205ENST00000459909 PRDM11Q9NQV5 511 aa24.67■■□□□ 1.54
TMEM50B-205ENST00000459909 SPATA31A1Q5TZJ5 1347 aa24.66■■□□□ 1.54
TMEM50B-205ENST00000459909 ALS2Q96Q42 1657 aa24.66■■□□□ 1.54
TMEM50B-205ENST00000459909 APBA3O96018 575 aa24.66■■□□□ 1.54
TMEM50B-205ENST00000459909 MPHOSPH9Q99550 1183 aa24.66■■□□□ 1.54
TMEM50B-205ENST00000459909 DLC1Q96QB1 1528 aa24.66■■□□□ 1.54
TMEM50B-205ENST00000459909 EIF3AQ14152 1382 aaKnown RBP24.64■■□□□ 1.53
TMEM50B-205ENST00000459909 NBPF8Q3BBV2 869 aa24.62■■□□□ 1.53
TMEM50B-205ENST00000459909 NBPF14Q5TI25 921 aa24.62■■□□□ 1.53
TMEM50B-205ENST00000459909 PRR36Q9H6K5 1346 aa24.61■■□□□ 1.53
TMEM50B-205ENST00000459909 PAK3O75914 559 aaPredicted RBP24.6■■□□□ 1.53
TMEM50B-205ENST00000459909 HIRIP3Q9BW71 556 aaPredicted RBP24.6■■□□□ 1.53
TMEM50B-205ENST00000459909 NGDNQ8NEJ9 315 aaKnown RBP24.59■■□□□ 1.53
TMEM50B-205ENST00000459909 KIAA0232Q92628 1395 aa24.58■■□□□ 1.53
TMEM50B-205ENST00000459909 DCAF8L1A6NGE4 600 aa24.58■■□□□ 1.53
TMEM50B-205ENST00000459909 STRN4Q9NRL3 753 aa24.58■■□□□ 1.53
TMEM50B-205ENST00000459909 CRYBG1Q9Y4K1 1723 aa24.58■■□□□ 1.52
TMEM50B-205ENST00000459909 TULP4Q9NRJ4 1543 aa24.57■■□□□ 1.52
TMEM50B-205ENST00000459909 PDE3BQ13370 1112 aa24.57■■□□□ 1.52
TMEM50B-205ENST00000459909 PPP1R1BQ9UD71 204 aaPredicted RBP24.57■■□□□ 1.52
TMEM50B-205ENST00000459909 CHRNA2Q15822 529 aa24.56■■□□□ 1.52
TMEM50B-205ENST00000459909 BARGINQ6ZT62 677 aa24.56■■□□□ 1.52
TMEM50B-205ENST00000459909 SPON1Q9HCB6 807 aa24.56■■□□□ 1.52
TMEM50B-205ENST00000459909 WASLO00401 505 aaPredicted RBP24.55■■□□□ 1.52
TMEM50B-205ENST00000459909 RREB1Q92766 1687 aa24.55■■□□□ 1.52
TMEM50B-205ENST00000459909 MINK1Q8N4C8 1332 aaPredicted RBP24.55■■□□□ 1.52
TMEM50B-205ENST00000459909 USP35Q9P2H5 1018 aa24.54■■□□□ 1.52
TMEM50B-205ENST00000459909 TRAK1Q9UPV9 953 aa24.54■■□□□ 1.52
TMEM50B-205ENST00000459909 NINLQ9Y2I6 1382 aa24.54■■□□□ 1.52
TMEM50B-205ENST00000459909 KCNQ2O43526 872 aa24.53■■□□□ 1.52
TMEM50B-205ENST00000459909 ADGRB1O14514 1584 aa24.52■■□□□ 1.52
TMEM50B-205ENST00000459909 NUP188Q5SRE5 1749 aa24.52■■□□□ 1.52
TMEM50B-205ENST00000459909 EVA1CP58658 441 aa24.51■■□□□ 1.51
TMEM50B-205ENST00000459909 ZC3H6P61129 1189 aaKnown RBP24.5■■□□□ 1.51
TMEM50B-205ENST00000459909 SSH2Q76I76 1423 aa24.5■■□□□ 1.51
TMEM50B-205ENST00000459909 ATP7BP35670 1465 aa24.48■■□□□ 1.51
TMEM50B-205ENST00000459909 TCP11L2Q8N4U5 519 aa24.48■■□□□ 1.51
TMEM50B-205ENST00000459909 C11orf95C9JLR9 678 aaPredicted RBP24.45■■□□□ 1.5
TMEM50B-205ENST00000459909 LARP1Q6PKG0 1096 aaKnown RBP24.45■■□□□ 1.5
TMEM50B-205ENST00000459909 THRAP3Q9Y2W1 955 aaKnown RBP24.45■■□□□ 1.5
TMEM50B-205ENST00000459909 PHRF1Q9P1Y6 1649 aaKnown RBP24.45■■□□□ 1.5
TMEM50B-205ENST00000459909 NUTM2GQ5VZR2 741 aa24.43■■□□□ 1.5
TMEM50B-205ENST00000459909 NUDT16Q96DE0 195 aaKnown RBP24.43■■□□□ 1.5
TMEM50B-205ENST00000459909 CAMTA1Q9Y6Y1 1673 aa24.4■■□□□ 1.5
TMEM50B-205ENST00000459909 CPDO75976 1380 aa24.4■■□□□ 1.5
TMEM50B-205ENST00000459909 ITSN1Q15811 1721 aa24.38■■□□□ 1.49
TMEM50B-205ENST00000459909 PLSCR1O15162 318 aa24.38■■□□□ 1.49
TMEM50B-205ENST00000459909 POLR3AO14802 1390 aaPredicted RBP24.38■■□□□ 1.49
TMEM50B-205ENST00000459909 NRKQ7Z2Y5 1582 aa24.36■■□□□ 1.49
TMEM50B-205ENST00000459909 ACEP12821 1306 aa24.35■■□□□ 1.49
TMEM50B-205ENST00000459909 OVOS2A0A0G2JMS6 1433 aa24.35■■□□□ 1.49
TMEM50B-205ENST00000459909 OVOS2A0A0J9YW53 1432 aa24.35■■□□□ 1.49
TMEM50B-205ENST00000459909 OVOS2Q6IE36 1432 aa24.35■■□□□ 1.49
TMEM50B-205ENST00000459909 ABTB2Q8N961 1025 aa24.35■■□□□ 1.49
TMEM50B-205ENST00000459909 LMO7Q8WWI1 1683 aa24.34■■□□□ 1.49
TMEM50B-205ENST00000459909 KDM2AQ9Y2K7 1162 aa24.34■■□□□ 1.49
TMEM50B-205ENST00000459909 USP19O94966 1318 aa24.34■■□□□ 1.49
TMEM50B-205ENST00000459909 PARP4Q9UKK3 1724 aaKnown RBP24.33■■□□□ 1.49
TMEM50B-205ENST00000459909 ZNF784Q8NCA9 323 aaPredicted RBP24.33■■□□□ 1.49
TMEM50B-205ENST00000459909 STAC3Q96MF2 364 aa24.33■■□□□ 1.49
TMEM50B-205ENST00000459909 CDK19Q9BWU1 502 aa24.33■■□□□ 1.49
TMEM50B-205ENST00000459909 ANO8Q9HCE9 1232 aaPredicted RBP24.33■■□□□ 1.49
TMEM50B-205ENST00000459909 CCDC61Q9Y6R9 512 aa24.33■■□□□ 1.49
TMEM50B-205ENST00000459909 DCAF11Q8TEB1 546 aa24.32■■□□□ 1.48
TMEM50B-205ENST00000459909 RGPD3A6NKT7 1758 aaPredicted RBP24.31■■□□□ 1.48
TMEM50B-205ENST00000459909 RGPD4Q7Z3J3 1758 aa24.31■■□□□ 1.48
TMEM50B-205ENST00000459909 PLEKHG3A1L390 1219 aa24.31■■□□□ 1.48
TMEM50B-205ENST00000459909 COL5A2P05997 1499 aaPredicted RBP24.31■■□□□ 1.48
TMEM50B-205ENST00000459909 CRB1P82279 1406 aa24.3■■□□□ 1.48
TMEM50B-205ENST00000459909 GCP02774 474 aa24.3■■□□□ 1.48
TMEM50B-205ENST00000459909 NLRP13Q86W25 1043 aa24.29■■□□□ 1.48
TMEM50B-205ENST00000459909 BCL11BQ9C0K0 894 aaPredicted RBP24.29■■□□□ 1.48
TMEM50B-205ENST00000459909 CASZ1Q86V15 1759 aa24.29■■□□□ 1.48
TMEM50B-205ENST00000459909 PEAK1Q9H792 1746 aa24.28■■□□□ 1.48
TMEM50B-205ENST00000459909 ZBTB7AO95365 584 aa24.27■■□□□ 1.48
TMEM50B-205ENST00000459909 PTGER2P43116 358 aa24.27■■□□□ 1.48
TMEM50B-205ENST00000459909 DDB1Q16531 1140 aa24.27■■□□□ 1.48
TMEM50B-205ENST00000459909 ARHGEF28Q8N1W1 1705 aaKnown RBP24.27■■□□□ 1.48
TMEM50B-205ENST00000459909 PDGFDQ9GZP0 370 aaPredicted RBP24.26■■□□□ 1.47
TMEM50B-205ENST00000459909 TOPAZ1Q8N9V7 1692 aa24.25■■□□□ 1.47
TMEM50B-205ENST00000459909 PROM2Q8N271 834 aa24.24■■□□□ 1.47
TMEM50B-205ENST00000459909 SENP3-EIF4A1A0A087X0R7 540 aa24.22■■□□□ 1.47
TMEM50B-205ENST00000459909 PTF1AQ7RTS3 328 aa24.22■■□□□ 1.47
TMEM50B-205ENST00000459909 SYT17Q9BSW7 474 aa24.22■■□□□ 1.47
TMEM50B-205ENST00000459909 ATF5Q9Y2D1 282 aaPredicted RBP24.22■■□□□ 1.47
TMEM50B-205ENST00000459909 LRRC37A3O60309 1634 aa24.21■■□□□ 1.47
TMEM50B-205ENST00000459909 BCL9O00512 1426 aa24.21■■□□□ 1.47
TMEM50B-205ENST00000459909 AATKQ6ZMQ8 1374 aa24.21■■□□□ 1.47
TMEM50B-205ENST00000459909 FHDC1Q9C0D6 1143 aaPredicted RBP24.21■■□□□ 1.47
TMEM50B-205ENST00000459909 MYOM1P52179 1685 aa24.21■■□□□ 1.47
TMEM50B-205ENST00000459909 BRD4O60885 1362 aaPredicted RBP24.2■■□□□ 1.46
TMEM50B-205ENST00000459909 TOM1L2Q6ZVM7 507 aa24.2■■□□□ 1.46
TMEM50B-205ENST00000459909 STK32BQ9NY57 414 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms