RNA–Protein interactions for RNA: ENST00000449395.5

PRDM15-208, Transcript of PR/SET domain 15, humanhuman

TSL 1 (best)

Gene PRDM15, Length 6,662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM15-208ENST00000449395 TPM1P09493 284 aa12.77□□□□□ -0.37
PRDM15-208ENST00000449395 APPP05067 770 aa12.76□□□□□ -0.37
PRDM15-208ENST00000449395 PLEKHO1Q53GL0 409 aaPredicted RBP12.76□□□□□ -0.37
PRDM15-208ENST00000449395 RPGRQ92834 1020 aaKnown RBP12.76□□□□□ -0.37
PRDM15-208ENST00000449395 CCDC7Q96M83 1385 aa12.76□□□□□ -0.37
PRDM15-208ENST00000449395 G3BP1Q13283 466 aaKnown RBP eCLIP12.76□□□□□ -0.37
PRDM15-208ENST00000449395 CHRNA2Q15822 529 aa12.76□□□□□ -0.37
PRDM15-208ENST00000449395 CCAR2Q8N163 923 aaKnown RBP12.75□□□□□ -0.37
PRDM15-208ENST00000449395 KIF7Q2M1P5 1343 aa12.75□□□□□ -0.37
PRDM15-208ENST00000449395 ZNF644Q9H582 1327 aaPredicted RBP12.75□□□□□ -0.37
PRDM15-208ENST00000449395 RNF20Q5VTR2 975 aa12.75□□□□□ -0.37
PRDM15-208ENST00000449395 VTI1AQ96AJ9 217 aa12.75□□□□□ -0.37
PRDM15-208ENST00000449395 TMOD2Q9NZR1 351 aa12.75□□□□□ -0.37
PRDM15-208ENST00000449395 CHMP5Q9NZZ3 219 aa12.75□□□□□ -0.37
PRDM15-208ENST00000449395 FANCIQ9NVI1 1328 aa12.75□□□□□ -0.37
PRDM15-208ENST00000449395 CPLX1O14810 134 aa12.75□□□□□ -0.37
PRDM15-208ENST00000449395 CA8P35219 290 aa12.75□□□□□ -0.37
PRDM15-208ENST00000449395 GNAI1P63096 354 aa12.75□□□□□ -0.37
PRDM15-208ENST00000449395 TMEM132AQ24JP5 1023 aa12.75□□□□□ -0.37
PRDM15-208ENST00000449395 TSPYL4Q9UJ04 414 aa12.75□□□□□ -0.37
PRDM15-208ENST00000449395 INTS3Q68E01 1043 aaKnown RBP12.75□□□□□ -0.37
PRDM15-208ENST00000449395 FGD6Q6ZV73 1430 aa12.74□□□□□ -0.37
PRDM15-208ENST00000449395 CUX1P39880 1505 aa12.74□□□□□ -0.37
PRDM15-208ENST00000449395 HMOX1P09601 288 aa12.74□□□□□ -0.37
PRDM15-208ENST00000449395 PLCD3Q8N3E9 789 aa12.74□□□□□ -0.37
PRDM15-208ENST00000449395 PARP3Q9Y6F1 533 aa12.74□□□□□ -0.37
PRDM15-208ENST00000449395 HSP90AA2PQ14568 343 aaPredicted RBP12.74□□□□□ -0.37
PRDM15-208ENST00000449395 CCDC43Q96MW1 224 aaKnown RBP12.73□□□□□ -0.37
PRDM15-208ENST00000449395 GJA3Q9Y6H8 435 aa12.73□□□□□ -0.37
PRDM15-208ENST00000449395 TRDNQ13061 729 aa12.73□□□□□ -0.37
PRDM15-208ENST00000449395 LNPKQ9C0E8 428 aa12.73□□□□□ -0.37
PRDM15-208ENST00000449395 RSPH6AQ9H0K4 717 aa12.73□□□□□ -0.37
PRDM15-208ENST00000449395 BICD2Q8TD16 824 aa12.73□□□□□ -0.37
PRDM15-208ENST00000449395 PTCD1O75127 700 aaKnown RBP12.72□□□□□ -0.37
PRDM15-208ENST00000449395 MAP3K9P80192 1104 aa12.72□□□□□ -0.37
PRDM15-208ENST00000449395 STAC3Q96MF2 364 aa12.72□□□□□ -0.37
PRDM15-208ENST00000449395 RBM26Q5T8P6 1007 aaKnown RBP12.72□□□□□ -0.37
PRDM15-208ENST00000449395 CNTLNQ9NXG0 1405 aa12.72□□□□□ -0.37
PRDM15-208ENST00000449395 DENND4BO75064 1496 aaPredicted RBP12.72□□□□□ -0.37
PRDM15-208ENST00000449395 FAM135AQ9P2D6 1515 aa12.72□□□□□ -0.37
PRDM15-208ENST00000449395 FAM98CQ17RN3 349 aaKnown RBP12.72□□□□□ -0.37
PRDM15-208ENST00000449395 ZNF592Q92610 1267 aa12.72□□□□□ -0.37
PRDM15-208ENST00000449395 IGF1RP08069 1367 aa12.72□□□□□ -0.37
PRDM15-208ENST00000449395 HSP90AB4PQ58FF6 505 aa12.72□□□□□ -0.37
PRDM15-208ENST00000449395 SMC3Q9UQE7 1217 aa12.71□□□□□ -0.37
PRDM15-208ENST00000449395 MTHFSP49914 203 aa12.71□□□□□ -0.37
PRDM15-208ENST00000449395 CERKQ8TCT0 537 aa12.71□□□□□ -0.37
PRDM15-208ENST00000449395 ERC2O15083 957 aa12.71□□□□□ -0.38
PRDM15-208ENST00000449395 ARHGAP27Q6ZUM4 889 aa12.71□□□□□ -0.38
PRDM15-208ENST00000449395 TOPBP1Q92547 1522 aa12.71□□□□□ -0.38
PRDM15-208ENST00000449395 PCMTD1Q96MG8 357 aaPredicted RBP12.71□□□□□ -0.38
PRDM15-208ENST00000449395 GGNBP2Q9H3C7 697 aa12.71□□□□□ -0.38
PRDM15-208ENST00000449395 LAMC3Q9Y6N6 1575 aa12.7□□□□□ -0.38
PRDM15-208ENST00000449395 VPS37CA5D8V6 355 aaPredicted RBP12.7□□□□□ -0.38
PRDM15-208ENST00000449395 DDB1Q16531 1140 aa12.7□□□□□ -0.38
PRDM15-208ENST00000449395 NFXL1Q6ZNB6 911 aa12.7□□□□□ -0.38
PRDM15-208ENST00000449395 PANK1Q8TE04 598 aa12.7□□□□□ -0.38
PRDM15-208ENST00000449395 MIA2Q96PC5 1412 aa12.7□□□□□ -0.38
PRDM15-208ENST00000449395 PPM1FP49593 454 aaPredicted RBP12.7□□□□□ -0.38
PRDM15-208ENST00000449395 NUCB2P80303 420 aa12.7□□□□□ -0.38
PRDM15-208ENST00000449395 CCDC70Q6NSX1 233 aa12.7□□□□□ -0.38
PRDM15-208ENST00000449395 CCDC47Q96A33 483 aaKnown RBP12.7□□□□□ -0.38
PRDM15-208ENST00000449395 RFX1P22670 979 aa12.7□□□□□ -0.38
PRDM15-208ENST00000449395 C22orf23Q9BZE7 217 aa12.7□□□□□ -0.38
PRDM15-208ENST00000449395 HOOK1Q9UJC3 728 aaKnown RBP12.7□□□□□ -0.38
PRDM15-208ENST00000449395 NF2P35240 595 aa12.7□□□□□ -0.38
PRDM15-208ENST00000449395 WWC2Q6AWC2 1192 aa12.7□□□□□ -0.38
PRDM15-208ENST00000449395 AAMPQ13685 434 aa12.69□□□□□ -0.38
PRDM15-208ENST00000449395 ANKRD20A12PQ8NF67 263 aa12.69□□□□□ -0.38
PRDM15-208ENST00000449395 CDK19Q9BWU1 502 aa12.69□□□□□ -0.38
PRDM15-208ENST00000449395 SLC52A1Q9NWF4 448 aa12.69□□□□□ -0.38
PRDM15-208ENST00000449395 ZNF652Q9Y2D9 606 aa12.69□□□□□ -0.38
PRDM15-208ENST00000449395 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.69□□□□□ -0.38
PRDM15-208ENST00000449395 ERICH2A1L162 156 aa12.69□□□□□ -0.38
PRDM15-208ENST00000449395 ANKIB1Q9P2G1 1089 aa12.69□□□□□ -0.38
PRDM15-208ENST00000449395 PHF8Q9UPP1 1060 aa12.69□□□□□ -0.38
PRDM15-208ENST00000449395 IPO7O95373 1038 aaKnown RBP12.68□□□□□ -0.38
PRDM15-208ENST00000449395 ST5P78524 1137 aa12.68□□□□□ -0.38
PRDM15-208ENST00000449395 GPS2Q13227 327 aa12.68□□□□□ -0.38
PRDM15-208ENST00000449395 CABLES1Q8TDN4 633 aa12.68□□□□□ -0.38
PRDM15-208ENST00000449395 PLB1Q6P1J6 1458 aa12.68□□□□□ -0.38
PRDM15-208ENST00000449395 ANKRD50Q9ULJ7 1429 aa12.68□□□□□ -0.38
PRDM15-208ENST00000449395 MPHOSPH10O00566 681 aaKnown RBP12.68□□□□□ -0.38
PRDM15-208ENST00000449395 LRRC9Q6ZRR7 1453 aa12.68□□□□□ -0.38
PRDM15-208ENST00000449395 SASS6Q6UVJ0 657 aa12.68□□□□□ -0.38
PRDM15-208ENST00000449395 ADGRL1O94910 1474 aa12.67□□□□□ -0.38
PRDM15-208ENST00000449395 BCS1LQ9Y276 419 aa12.67□□□□□ -0.38
PRDM15-208ENST00000449395 ADAMTS8Q9UP79 889 aa12.67□□□□□ -0.38
PRDM15-208ENST00000449395 TNRQ92752 1358 aa12.67□□□□□ -0.38
PRDM15-208ENST00000449395 FOSBP53539 338 aa12.67□□□□□ -0.38
PRDM15-208ENST00000449395 JDP2Q8WYK2 163 aa12.67□□□□□ -0.38
PRDM15-208ENST00000449395 CNNM1Q9NRU3 951 aa12.67□□□□□ -0.38
PRDM15-208ENST00000449395 BRD4O60885 1362 aaPredicted RBP12.67□□□□□ -0.38
PRDM15-208ENST00000449395 STARD3NLO95772 234 aa12.67□□□□□ -0.38
PRDM15-208ENST00000449395 UBTFL1P0CB47 393 aaPredicted RBP12.66□□□□□ -0.38
PRDM15-208ENST00000449395 NEUROD6Q96NK8 337 aa12.66□□□□□ -0.38
PRDM15-208ENST00000449395 CDC45O75419 566 aa12.66□□□□□ -0.38
PRDM15-208ENST00000449395 HOMER1Q86YM7 354 aa12.66□□□□□ -0.38
PRDM15-208ENST00000449395 MYL6BP14649 208 aa12.66□□□□□ -0.38
PRDM15-208ENST00000449395 KIF21BO75037 1637 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms