RNA–Protein interactions for RNA: ENST00000435981.5

LINC01393-202, Transcript of long intergenic non-protein coding RNA 1393, humanhuman

TSL 1 (best) BASIC

Gene LINC01393, Length 1,187 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01393-202ENST00000435981 NXF1Q9UBU9 619 aaKnown RBP11.62□□□□□ -0.55
LINC01393-202ENST00000435981 AQRO60306 1485 aaKnown RBP eCLIP11.62□□□□□ -0.55
LINC01393-202ENST00000435981 PBRM1Q86U86 1689 aa11.62□□□□□ -0.55
LINC01393-202ENST00000435981 ZBTB24O43167 697 aaPredicted RBP11.61□□□□□ -0.55
LINC01393-202ENST00000435981 GRIN2BQ13224 1484 aa11.6□□□□□ -0.55
LINC01393-202ENST00000435981 SMPD1P17405 629 aa11.6□□□□□ -0.55
LINC01393-202ENST00000435981 ABCA5Q8WWZ7 1642 aa11.6□□□□□ -0.55
LINC01393-202ENST00000435981 TRIM32Q13049 653 aa11.59□□□□□ -0.55
LINC01393-202ENST00000435981 SNIP1Q8TAD8 396 aaKnown RBP11.59□□□□□ -0.55
LINC01393-202ENST00000435981 USB1Q9BQ65 265 aaKnown RBP11.59□□□□□ -0.55
LINC01393-202ENST00000435981 MINK1Q8N4C8 1332 aaPredicted RBP11.59□□□□□ -0.55
LINC01393-202ENST00000435981 DXOO77932 396 aaKnown RBP11.58□□□□□ -0.56
LINC01393-202ENST00000435981 CCDC102AQ96A19 550 aa11.58□□□□□ -0.56
LINC01393-202ENST00000435981 WNT7AO00755 349 aa11.56□□□□□ -0.56
LINC01393-202ENST00000435981 EEA1Q15075 1411 aa11.56□□□□□ -0.56
LINC01393-202ENST00000435981 ERICH3Q5RHP9 1530 aa11.55□□□□□ -0.56
LINC01393-202ENST00000435981 HOXA2O43364 376 aa11.55□□□□□ -0.56
LINC01393-202ENST00000435981 GUCA2AQ02747 115 aa11.55□□□□□ -0.56
LINC01393-202ENST00000435981 SNAPC4Q5SXM2 1469 aa11.55□□□□□ -0.56
LINC01393-202ENST00000435981 MAGI1Q96QZ7 1491 aaPredicted RBP11.55□□□□□ -0.56
LINC01393-202ENST00000435981 USP46P62068 366 aa11.54□□□□□ -0.56
LINC01393-202ENST00000435981 CHMP7Q8WUX9 453 aaPredicted RBP11.54□□□□□ -0.56
LINC01393-202ENST00000435981 CUL7Q14999 1698 aa11.53□□□□□ -0.56
LINC01393-202ENST00000435981 TULP1O00294 542 aaPredicted RBP11.53□□□□□ -0.56
LINC01393-202ENST00000435981 FAM9AQ8IZU1 332 aaPredicted RBP11.53□□□□□ -0.56
LINC01393-202ENST00000435981 VSIG10Q8N0Z9 540 aa11.53□□□□□ -0.56
LINC01393-202ENST00000435981 MRGPRX2Q96LB1 330 aa11.53□□□□□ -0.56
LINC01393-202ENST00000435981 FAM217BQ9NTX9 383 aaPredicted RBP11.52□□□□□ -0.57
LINC01393-202ENST00000435981 KCNMA1Q12791 1236 aa11.51□□□□□ -0.57
LINC01393-202ENST00000435981 CCDC24Q8N4L8 307 aa11.51□□□□□ -0.57
LINC01393-202ENST00000435981 SYMPKQ92797 1274 aaKnown RBP11.51□□□□□ -0.57
LINC01393-202ENST00000435981 GPCPD1Q9NPB8 672 aa11.51□□□□□ -0.57
LINC01393-202ENST00000435981 J3QL48 77 aa11.5□□□□□ -0.57
LINC01393-202ENST00000435981 FHAD1B1AJZ9 1412 aa11.5□□□□□ -0.57
LINC01393-202ENST00000435981 SYNJ2O15056 1496 aa11.5□□□□□ -0.57
LINC01393-202ENST00000435981 ADAMTS12P58397 1594 aa11.5□□□□□ -0.57
LINC01393-202ENST00000435981 CHD1O14646 1710 aa11.49□□□□□ -0.57
LINC01393-202ENST00000435981 SKOR1P84550 965 aa11.49□□□□□ -0.57
LINC01393-202ENST00000435981 H3BM21 787 aa11.48□□□□□ -0.57
LINC01393-202ENST00000435981 CLCN1P35523 988 aa11.48□□□□□ -0.57
LINC01393-202ENST00000435981 KCTD17Q8N5Z5 321 aa11.48□□□□□ -0.57
LINC01393-202ENST00000435981 REPIN1Q9BWE0 567 aaKnown RBP11.48□□□□□ -0.57
LINC01393-202ENST00000435981 IGF1RP08069 1367 aa11.48□□□□□ -0.57
LINC01393-202ENST00000435981 RUSC2Q8N2Y8 1516 aa11.48□□□□□ -0.57
LINC01393-202ENST00000435981 CARMIL1Q5VZK9 1371 aa11.47□□□□□ -0.57
LINC01393-202ENST00000435981 JUNDP17535 347 aa11.46□□□□□ -0.57
LINC01393-202ENST00000435981 HPS1Q92902 700 aa11.46□□□□□ -0.57
LINC01393-202ENST00000435981 RC3H1Q5TC82 1133 aaKnown RBP11.45□□□□□ -0.58
LINC01393-202ENST00000435981 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.45□□□□□ -0.58
LINC01393-202ENST00000435981 RAPGEF2Q9Y4G8 1499 aa11.44□□□□□ -0.58
LINC01393-202ENST00000435981 NUTM1Q86Y26 1132 aa11.43□□□□□ -0.58
LINC01393-202ENST00000435981 PCDHGC3Q9UN70 934 aa11.43□□□□□ -0.58
LINC01393-202ENST00000435981 GRIN2AQ12879 1464 aa11.43□□□□□ -0.58
LINC01393-202ENST00000435981 GSK3AP49840 483 aa11.42□□□□□ -0.58
LINC01393-202ENST00000435981 WNT7BP56706 349 aa11.42□□□□□ -0.58
LINC01393-202ENST00000435981 PTCRAQ6ISU1 281 aaPredicted RBP11.42□□□□□ -0.58
LINC01393-202ENST00000435981 RETREG3Q86VR2 466 aa11.42□□□□□ -0.58
LINC01393-202ENST00000435981 ERBB4Q15303 1308 aa11.41□□□□□ -0.58
LINC01393-202ENST00000435981 KRI1Q8N9T8 703 aaKnown RBP11.4□□□□□ -0.58
LINC01393-202ENST00000435981 NUDT12Q9BQG2 462 aa11.4□□□□□ -0.58
LINC01393-202ENST00000435981 FDX1P10109 184 aa11.39□□□□□ -0.59
LINC01393-202ENST00000435981 KIF21BO75037 1637 aa11.38□□□□□ -0.59
LINC01393-202ENST00000435981 SSTR3P32745 418 aaPredicted RBP11.38□□□□□ -0.59
LINC01393-202ENST00000435981 PRXQ9BXM0 1461 aa11.38□□□□□ -0.59
LINC01393-202ENST00000435981 UBTFP17480 764 aaKnown RBP11.37□□□□□ -0.59
LINC01393-202ENST00000435981 VEGFBP49765 207 aa11.37□□□□□ -0.59
LINC01393-202ENST00000435981 TMEM151AQ8N4L1 468 aa11.37□□□□□ -0.59
LINC01393-202ENST00000435981 SPIRE2Q8WWL2 714 aa11.37□□□□□ -0.59
LINC01393-202ENST00000435981 GOLGA3Q08378 1498 aa11.37□□□□□ -0.59
LINC01393-202ENST00000435981 C6orf229H3BNL8 230 aa11.36□□□□□ -0.59
LINC01393-202ENST00000435981 NDUFV2P19404 249 aa11.36□□□□□ -0.59
LINC01393-202ENST00000435981 CTTNBP2Q8WZ74 1663 aa11.36□□□□□ -0.59
LINC01393-202ENST00000435981 SIAH2O43255 324 aa11.35□□□□□ -0.59
LINC01393-202ENST00000435981 ALDH1A1P00352 501 aa11.35□□□□□ -0.59
LINC01393-202ENST00000435981 CEP170Q5SW79 1584 aa11.34□□□□□ -0.59
LINC01393-202ENST00000435981 NUP160Q12769 1436 aa11.34□□□□□ -0.59
LINC01393-202ENST00000435981 MOXD2PA6NHM9 499 aa11.33□□□□□ -0.6
LINC01393-202ENST00000435981 BARGINQ6ZT62 677 aa11.33□□□□□ -0.6
LINC01393-202ENST00000435981 KIAA0586Q9BVV6 1533 aa11.32□□□□□ -0.6
LINC01393-202ENST00000435981 CCNYL3P0C7X3 344 aa11.32□□□□□ -0.6
LINC01393-202ENST00000435981 MS4A1P11836 297 aa11.32□□□□□ -0.6
LINC01393-202ENST00000435981 SH3BP2P78314 561 aa11.32□□□□□ -0.6
LINC01393-202ENST00000435981 IQGAP2Q13576 1575 aa11.32□□□□□ -0.6
LINC01393-202ENST00000435981 ZMYND10O75800 440 aa11.31□□□□□ -0.6
LINC01393-202ENST00000435981 GDF11O95390 407 aa11.31□□□□□ -0.6
LINC01393-202ENST00000435981 EHBP1Q8NDI1 1231 aa11.31□□□□□ -0.6
LINC01393-202ENST00000435981 CLASP1Q7Z460 1538 aa11.3□□□□□ -0.6
LINC01393-202ENST00000435981 TTLL12Q14166 644 aaPredicted RBP11.3□□□□□ -0.6
LINC01393-202ENST00000435981 AMHR2Q16671 573 aa11.3□□□□□ -0.6
LINC01393-202ENST00000435981 VSIG8P0DPA2 414 aa11.29□□□□□ -0.6
LINC01393-202ENST00000435981 RASSF7Q02833 373 aa11.29□□□□□ -0.6
LINC01393-202ENST00000435981 PTPRNQ16849 979 aa11.29□□□□□ -0.6
LINC01393-202ENST00000435981 GIGYF2Q6Y7W6 1299 aaKnown RBP11.29□□□□□ -0.6
LINC01393-202ENST00000435981 TRIM46Q7Z4K8 759 aa11.29□□□□□ -0.6
LINC01393-202ENST00000435981 EVA1BQ9NVM1 165 aa11.29□□□□□ -0.6
LINC01393-202ENST00000435981 RANGAP1P46060 587 aaPredicted RBP11.28□□□□□ -0.6
LINC01393-202ENST00000435981 PRR7Q8TB68 274 aa11.28□□□□□ -0.6
LINC01393-202ENST00000435981 UNC93B1Q9H1C4 597 aa11.28□□□□□ -0.6
LINC01393-202ENST00000435981 LINC01559Q495D7 138 aa11.27□□□□□ -0.61
LINC01393-202ENST00000435981 ZC3H15Q8WU90 426 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms