RNA–Protein interactions for RNA: ENST00000421722.5

PMS1-208, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 2,285 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-208ENST00000421722 C11orf95C9JLR9 678 aaPredicted RBP10.03□□□□□ -0.8
PMS1-208ENST00000421722 SLC4A1APQ9BWU0 796 aaKnown RBP10.02□□□□□ -0.81
PMS1-208ENST00000421722 C14orf93Q9H972 538 aaKnown RBP10.02□□□□□ -0.81
PMS1-208ENST00000421722 GPRASP1Q5JY77 1395 aa10.02□□□□□ -0.81
PMS1-208ENST00000421722 TMEM132EQ6IEE7 984 aa10.01□□□□□ -0.81
PMS1-208ENST00000421722 LMOD2Q6P5Q4 547 aa10.01□□□□□ -0.81
PMS1-208ENST00000421722 SPON1Q9HCB6 807 aa10.01□□□□□ -0.81
PMS1-208ENST00000421722 SPATA31A1Q5TZJ5 1347 aa10.01□□□□□ -0.81
PMS1-208ENST00000421722 KCNQ2O43526 872 aa10□□□□□ -0.81
PMS1-208ENST00000421722 APBA3O96018 575 aa10□□□□□ -0.81
PMS1-208ENST00000421722 BARGINQ6ZT62 677 aa10□□□□□ -0.81
PMS1-208ENST00000421722 RGPD3A6NKT7 1758 aaPredicted RBP9.99□□□□□ -0.81
PMS1-208ENST00000421722 RGPD4Q7Z3J3 1758 aa9.99□□□□□ -0.81
PMS1-208ENST00000421722 TRIM37O94972 964 aa9.99□□□□□ -0.81
PMS1-208ENST00000421722 PPP1R1BQ9UD71 204 aaPredicted RBP9.99□□□□□ -0.81
PMS1-208ENST00000421722 ACIN1Q9UKV3 1341 aaKnown RBP9.98□□□□□ -0.81
PMS1-208ENST00000421722 TULP4Q9NRJ4 1543 aa9.98□□□□□ -0.81
PMS1-208ENST00000421722 PRDM11Q9NQV5 511 aa9.97□□□□□ -0.81
PMS1-208ENST00000421722 ATP7BP35670 1465 aa9.97□□□□□ -0.81
PMS1-208ENST00000421722 FAM182BQ5T319 152 aa9.96□□□□□ -0.81
PMS1-208ENST00000421722 PMFBP1Q8TBY8 1022 aa9.96□□□□□ -0.81
PMS1-208ENST00000421722 PRAM1Q96QH2 718 aa9.96□□□□□ -0.81
PMS1-208ENST00000421722 RGL3Q3MIN7 710 aa9.96□□□□□ -0.82
PMS1-208ENST00000421722 EP400Q96L91 3159 aa9.96□□□□□ -0.82
PMS1-208ENST00000421722 PHRF1Q9P1Y6 1649 aaKnown RBP9.96□□□□□ -0.82
PMS1-208ENST00000421722 PDE3BQ13370 1112 aa9.95□□□□□ -0.82
PMS1-208ENST00000421722 POGKQ9P215 609 aa9.95□□□□□ -0.82
PMS1-208ENST00000421722 THRAP3Q9Y2W1 955 aaKnown RBP9.95□□□□□ -0.82
PMS1-208ENST00000421722 PLEKHG5O94827 1062 aa9.95□□□□□ -0.82
PMS1-208ENST00000421722 CASZ1Q86V15 1759 aa9.95□□□□□ -0.82
PMS1-208ENST00000421722 SSH2Q76I76 1423 aa9.94□□□□□ -0.82
PMS1-208ENST00000421722 ITSN1Q15811 1721 aa9.94□□□□□ -0.82
PMS1-208ENST00000421722 PARP4Q9UKK3 1724 aaKnown RBP9.94□□□□□ -0.82
PMS1-208ENST00000421722 KIAA0232Q92628 1395 aa9.94□□□□□ -0.82
PMS1-208ENST00000421722 PRR36Q9H6K5 1346 aa9.93□□□□□ -0.82
PMS1-208ENST00000421722 PLSCR1O15162 318 aa9.93□□□□□ -0.82
PMS1-208ENST00000421722 CFAP70Q5T0N1 1121 aa9.93□□□□□ -0.82
PMS1-208ENST00000421722 TCP11L2Q8N4U5 519 aa9.93□□□□□ -0.82
PMS1-208ENST00000421722 CPDO75976 1380 aa9.92□□□□□ -0.82
PMS1-208ENST00000421722 WASLO00401 505 aaPredicted RBP9.92□□□□□ -0.82
PMS1-208ENST00000421722 EVA1CP58658 441 aa9.92□□□□□ -0.82
PMS1-208ENST00000421722 NGDNQ8NEJ9 315 aaKnown RBP9.92□□□□□ -0.82
PMS1-208ENST00000421722 ADGRB1O14514 1584 aa9.92□□□□□ -0.82
PMS1-208ENST00000421722 LMO7Q8WWI1 1683 aa9.91□□□□□ -0.82
PMS1-208ENST00000421722 IFFO2Q5TF58 517 aa9.91□□□□□ -0.82
PMS1-208ENST00000421722 PEAK1Q9H792 1746 aa9.91□□□□□ -0.82
PMS1-208ENST00000421722 NRKQ7Z2Y5 1582 aa9.91□□□□□ -0.82
PMS1-208ENST00000421722 ZNF784Q8NCA9 323 aaPredicted RBP9.91□□□□□ -0.82
PMS1-208ENST00000421722 MPHOSPH9Q99550 1183 aa9.91□□□□□ -0.82
PMS1-208ENST00000421722 STRN4Q9NRL3 753 aa9.91□□□□□ -0.82
PMS1-208ENST00000421722 CAMTA1Q9Y6Y1 1673 aa9.91□□□□□ -0.82
PMS1-208ENST00000421722 BCL9O00512 1426 aa9.9□□□□□ -0.82
PMS1-208ENST00000421722 OVOS2A0A0G2JMS6 1433 aa9.89□□□□□ -0.83
PMS1-208ENST00000421722 OVOS2A0A0J9YW53 1432 aa9.89□□□□□ -0.83
PMS1-208ENST00000421722 OVOS2Q6IE36 1432 aa9.89□□□□□ -0.83
PMS1-208ENST00000421722 PAK3O75914 559 aaPredicted RBP9.89□□□□□ -0.83
PMS1-208ENST00000421722 SAFB2Q14151 953 aaKnown RBP eCLIP9.89□□□□□ -0.83
PMS1-208ENST00000421722 STAC3Q96MF2 364 aa9.89□□□□□ -0.83
PMS1-208ENST00000421722 BRD4O60885 1362 aaPredicted RBP9.89□□□□□ -0.83
PMS1-208ENST00000421722 C1QTNF8P60827 252 aa9.89□□□□□ -0.83
PMS1-208ENST00000421722 CHRNA2Q15822 529 aa9.89□□□□□ -0.83
PMS1-208ENST00000421722 USP19O94966 1318 aa9.89□□□□□ -0.83
PMS1-208ENST00000421722 POLR3AO14802 1390 aaPredicted RBP9.88□□□□□ -0.83
PMS1-208ENST00000421722 SENP3-EIF4A1A0A087X0R7 540 aa9.88□□□□□ -0.83
PMS1-208ENST00000421722 SBF2Q86WG5 1849 aa9.88□□□□□ -0.83
PMS1-208ENST00000421722 MYOM1P52179 1685 aa9.88□□□□□ -0.83
PMS1-208ENST00000421722 BCL11BQ9C0K0 894 aaPredicted RBP9.87□□□□□ -0.83
PMS1-208ENST00000421722 MINK1Q8N4C8 1332 aaPredicted RBP9.87□□□□□ -0.83
PMS1-208ENST00000421722 MAP3K5Q99683 1374 aa9.87□□□□□ -0.83
PMS1-208ENST00000421722 CHD4Q14839 1912 aa9.87□□□□□ -0.83
PMS1-208ENST00000421722 PTGER2P43116 358 aa9.87□□□□□ -0.83
PMS1-208ENST00000421722 LARP1Q6PKG0 1096 aaKnown RBP9.87□□□□□ -0.83
PMS1-208ENST00000421722 TOPAZ1Q8N9V7 1692 aa9.87□□□□□ -0.83
PMS1-208ENST00000421722 ZC3H6P61129 1189 aaKnown RBP9.86□□□□□ -0.83
PMS1-208ENST00000421722 NUDT16Q96DE0 195 aaKnown RBP9.86□□□□□ -0.83
PMS1-208ENST00000421722 CRB1P82279 1406 aa9.86□□□□□ -0.83
PMS1-208ENST00000421722 AATKQ6ZMQ8 1374 aa9.86□□□□□ -0.83
PMS1-208ENST00000421722 PLEKHG3A1L390 1219 aa9.86□□□□□ -0.83
PMS1-208ENST00000421722 CDCA7Q9BWT1 371 aaPredicted RBP9.86□□□□□ -0.83
PMS1-208ENST00000421722 COL5A2P05997 1499 aaPredicted RBP9.85□□□□□ -0.83
PMS1-208ENST00000421722 STK32BQ9NY57 414 aa9.85□□□□□ -0.83
PMS1-208ENST00000421722 TRAK1Q9UPV9 953 aa9.85□□□□□ -0.83
PMS1-208ENST00000421722 LRRC37A3O60309 1634 aa9.85□□□□□ -0.83
PMS1-208ENST00000421722 HIRIP3Q9BW71 556 aaPredicted RBP9.85□□□□□ -0.83
PMS1-208ENST00000421722 ANO8Q9HCE9 1232 aaPredicted RBP9.85□□□□□ -0.83
PMS1-208ENST00000421722 USP35Q9P2H5 1018 aa9.84□□□□□ -0.83
PMS1-208ENST00000421722 WNK3Q9BYP7 1800 aa9.84□□□□□ -0.83
PMS1-208ENST00000421722 NLRP13Q86W25 1043 aa9.84□□□□□ -0.83
PMS1-208ENST00000421722 SYT17Q9BSW7 474 aa9.84□□□□□ -0.83
PMS1-208ENST00000421722 MTFR1LQ9H019 292 aa9.84□□□□□ -0.83
PMS1-208ENST00000421722 ARHGEF28Q8N1W1 1705 aaKnown RBP9.83□□□□□ -0.84
PMS1-208ENST00000421722 SRCAPQ6ZRS2 3230 aa9.83□□□□□ -0.84
PMS1-208ENST00000421722 ACEP12821 1306 aa9.83□□□□□ -0.84
PMS1-208ENST00000421722 DDB1Q16531 1140 aa9.82□□□□□ -0.84
PMS1-208ENST00000421722 SGIP1Q9BQI5 828 aa9.82□□□□□ -0.84
PMS1-208ENST00000421722 CCDC61Q9Y6R9 512 aa9.82□□□□□ -0.84
PMS1-208ENST00000421722 SLC15A2Q16348 729 aa9.82□□□□□ -0.84
PMS1-208ENST00000421722 FHDC1Q9C0D6 1143 aaPredicted RBP9.82□□□□□ -0.84
PMS1-208ENST00000421722 SLIT3O75094 1523 aa9.82□□□□□ -0.84
PMS1-208ENST00000421722 ZBTB7AO95365 584 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms