RNA–Protein interactions for RNA: ENST00000409782.5

LSM5-203, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-203ENST00000409782 POM121Q96HA1 1249 aa10.27□□□□□ -0.77
LSM5-203ENST00000409782 COG6Q9Y2V7 657 aa10.27□□□□□ -0.77
LSM5-203ENST00000409782 PBRM1Q86U86 1689 aa10.26□□□□□ -0.77
LSM5-203ENST00000409782 GAPVD1Q14C86 1478 aa10.26□□□□□ -0.77
LSM5-203ENST00000409782 NDUFV2P19404 249 aa10.26□□□□□ -0.77
LSM5-203ENST00000409782 GJA5P36382 358 aa10.26□□□□□ -0.77
LSM5-203ENST00000409782 RIC3Q7Z5B4 369 aa10.26□□□□□ -0.77
LSM5-203ENST00000409782 KCTD17Q8N5Z5 321 aa10.26□□□□□ -0.77
LSM5-203ENST00000409782 HLA-CQ95604 372 aa10.26□□□□□ -0.77
LSM5-203ENST00000409782 SPSB2Q99619 263 aa10.26□□□□□ -0.77
LSM5-203ENST00000409782 ZNF777Q9ULD5 760 aaPredicted RBP10.26□□□□□ -0.77
LSM5-203ENST00000409782 RFC5P40937 340 aa10.25□□□□□ -0.77
LSM5-203ENST00000409782 GUCA2AQ02747 115 aa10.25□□□□□ -0.77
LSM5-203ENST00000409782 POLR3EQ9NVU0 708 aa10.25□□□□□ -0.77
LSM5-203ENST00000409782 ADH1BP00325 375 aa10.24□□□□□ -0.77
LSM5-203ENST00000409782 RSBN1LQ6PCB5 846 aaPredicted RBP10.24□□□□□ -0.77
LSM5-203ENST00000409782 BRICD5Q6PL45 260 aa10.24□□□□□ -0.77
LSM5-203ENST00000409782 NKX2-3Q8TAU0 364 aa10.24□□□□□ -0.77
LSM5-203ENST00000409782 ATP1B4Q9UN42 357 aaPredicted RBP10.24□□□□□ -0.77
LSM5-203ENST00000409782 SYNJ2O15056 1496 aa10.23□□□□□ -0.77
LSM5-203ENST00000409782 SPTLC1O15269 473 aa10.23□□□□□ -0.77
LSM5-203ENST00000409782 TLL1O43897 1013 aa10.23□□□□□ -0.77
LSM5-203ENST00000409782 C6orf229H3BNL8 230 aa10.22□□□□□ -0.77
LSM5-203ENST00000409782 GGCXP38435 758 aa10.22□□□□□ -0.77
LSM5-203ENST00000409782 THAP11Q96EK4 314 aa10.22□□□□□ -0.77
LSM5-203ENST00000409782 RNF19BQ6ZMZ0 732 aa10.21□□□□□ -0.77
LSM5-203ENST00000409782 USB1Q9BQ65 265 aaKnown RBP10.21□□□□□ -0.77
LSM5-203ENST00000409782 PCDHGC3Q9UN70 934 aa10.21□□□□□ -0.77
LSM5-203ENST00000409782 ARHGEF11O15085 1522 aa10.21□□□□□ -0.78
LSM5-203ENST00000409782 CLASP1Q7Z460 1538 aa10.21□□□□□ -0.78
LSM5-203ENST00000409782 ADAMTS12P58397 1594 aa10.21□□□□□ -0.78
LSM5-203ENST00000409782 RIMBP3CA6NJZ7 1639 aa10.21□□□□□ -0.78
LSM5-203ENST00000409782 RIMBP3BA6NNM3 1639 aa10.21□□□□□ -0.78
LSM5-203ENST00000409782 RIMBP3Q9UFD9 1639 aa10.21□□□□□ -0.78
LSM5-203ENST00000409782 SLC6A16Q9GZN6 736 aa10.2□□□□□ -0.78
LSM5-203ENST00000409782 ERICH3Q5RHP9 1530 aa10.19□□□□□ -0.78
LSM5-203ENST00000409782 PPP1R15AO75807 674 aaPredicted RBP10.19□□□□□ -0.78
LSM5-203ENST00000409782 MTMR2Q13614 643 aa10.19□□□□□ -0.78
LSM5-203ENST00000409782 CSPP1Q1MSJ5 1256 aa10.19□□□□□ -0.78
LSM5-203ENST00000409782 LIMD1Q9UGP4 676 aa10.19□□□□□ -0.78
LSM5-203ENST00000409782 A0A0G2JS52 829 aa10.18□□□□□ -0.78
LSM5-203ENST00000409782 PRPF38BQ5VTL8 546 aaKnown RBP10.18□□□□□ -0.78
LSM5-203ENST00000409782 RETREG3Q86VR2 466 aa10.18□□□□□ -0.78
LSM5-203ENST00000409782 WWC1Q8IX03 1113 aa10.18□□□□□ -0.78
LSM5-203ENST00000409782 SYMPKQ92797 1274 aaKnown RBP10.18□□□□□ -0.78
LSM5-203ENST00000409782 ZBTB3Q9H5J0 574 aa10.18□□□□□ -0.78
LSM5-203ENST00000409782 SNRKQ9NRH2 765 aa10.18□□□□□ -0.78
LSM5-203ENST00000409782 ZNF330Q9Y3S2 320 aaPredicted RBP10.18□□□□□ -0.78
LSM5-203ENST00000409782 PCDHB15Q9Y5E8 787 aa10.18□□□□□ -0.78
LSM5-203ENST00000409782 NUTM2BA6NNL0 878 aaPredicted RBP10.17□□□□□ -0.78
LSM5-203ENST00000409782 NUTM2EB1AL46 878 aaPredicted RBP10.17□□□□□ -0.78
LSM5-203ENST00000409782 NUTM2DQ5VT03 806 aaPredicted RBP10.17□□□□□ -0.78
LSM5-203ENST00000409782 PPP1R18Q6NYC8 613 aa10.17□□□□□ -0.78
LSM5-203ENST00000409782 NUTM2AQ8IVF1 878 aaPredicted RBP10.17□□□□□ -0.78
LSM5-203ENST00000409782 CHMP7Q8WUX9 453 aaPredicted RBP10.17□□□□□ -0.78
LSM5-203ENST00000409782 FHAD1B1AJZ9 1412 aa10.16□□□□□ -0.78
LSM5-203ENST00000409782 MSS51Q4VC12 460 aa10.16□□□□□ -0.78
LSM5-203ENST00000409782 FAM160A2Q8N612 972 aaPredicted RBP10.16□□□□□ -0.78
LSM5-203ENST00000409782 MTMR14Q8NCE2 650 aa10.16□□□□□ -0.78
LSM5-203ENST00000409782 PRM3Q9NNZ6 103 aa10.16□□□□□ -0.78
LSM5-203ENST00000409782 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.16□□□□□ -0.78
LSM5-203ENST00000409782 GRIN2AQ12879 1464 aa10.16□□□□□ -0.78
LSM5-203ENST00000409782 S1PR4O95977 384 aa10.15□□□□□ -0.78
LSM5-203ENST00000409782 PDE4CQ08493 712 aa10.14□□□□□ -0.79
LSM5-203ENST00000409782 LILRB3O75022 631 aa10.13□□□□□ -0.79
LSM5-203ENST00000409782 PRR7Q8TB68 274 aa10.13□□□□□ -0.79
LSM5-203ENST00000409782 CABLES1Q8TDN4 633 aa10.13□□□□□ -0.79
LSM5-203ENST00000409782 NUP160Q12769 1436 aa10.13□□□□□ -0.79
LSM5-203ENST00000409782 ARAP1Q96P48 1450 aa10.12□□□□□ -0.79
LSM5-203ENST00000409782 QPCTQ16769 361 aa10.12□□□□□ -0.79
LSM5-203ENST00000409782 KIF27Q86VH2 1401 aa10.11□□□□□ -0.79
LSM5-203ENST00000409782 RNF223E7ERA6 249 aa10.11□□□□□ -0.79
LSM5-203ENST00000409782 FBXO31Q5XUX0 539 aaPredicted RBP10.11□□□□□ -0.79
LSM5-203ENST00000409782 PRDM9Q9NQV7 894 aa10.11□□□□□ -0.79
LSM5-203ENST00000409782 CEP170Q5SW79 1584 aa10.1□□□□□ -0.79
LSM5-203ENST00000409782 ANKLE1Q8NAG6 615 aa10.1□□□□□ -0.79
LSM5-203ENST00000409782 RETREG2Q8NC44 543 aa10.1□□□□□ -0.79
LSM5-203ENST00000409782 CUL7Q14999 1698 aa10.09□□□□□ -0.79
LSM5-203ENST00000409782 DXOO77932 396 aaKnown RBP10.09□□□□□ -0.79
LSM5-203ENST00000409782 JUNDP17535 347 aa10.09□□□□□ -0.79
LSM5-203ENST00000409782 MMP16P51512 607 aa10.09□□□□□ -0.79
LSM5-203ENST00000409782 DESI1Q6ICB0 168 aa10.09□□□□□ -0.79
LSM5-203ENST00000409782 TSC1Q92574 1164 aa10.09□□□□□ -0.79
LSM5-203ENST00000409782 PPEF1O14829 653 aaPredicted RBP10.08□□□□□ -0.8
LSM5-203ENST00000409782 RTL5Q5HYW3 569 aaPredicted RBP10.08□□□□□ -0.8
LSM5-203ENST00000409782 GDPD2Q9HCC8 539 aa10.08□□□□□ -0.8
LSM5-203ENST00000409782 PATL2C9JE40 543 aaKnown RBP10.07□□□□□ -0.8
LSM5-203ENST00000409782 HELBQ8NG08 1087 aaPredicted RBP10.07□□□□□ -0.8
LSM5-203ENST00000409782 SHROOM2Q13796 1616 aa10.07□□□□□ -0.8
LSM5-203ENST00000409782 CFAP99D6REC4 459 aa10.06□□□□□ -0.8
LSM5-203ENST00000409782 RGS20O76081 388 aa10.06□□□□□ -0.8
LSM5-203ENST00000409782 CALR3Q96L12 384 aaKnown RBP10.06□□□□□ -0.8
LSM5-203ENST00000409782 FCF1Q9Y324 198 aaKnown RBP10.06□□□□□ -0.8
LSM5-203ENST00000409782 RUSC2Q8N2Y8 1516 aa10.06□□□□□ -0.8
LSM5-203ENST00000409782 PTPRNQ16849 979 aa10.04□□□□□ -0.8
LSM5-203ENST00000409782 CCDC24Q8N4L8 307 aa10.04□□□□□ -0.8
LSM5-203ENST00000409782 GLMNQ92990 594 aa10.04□□□□□ -0.8
LSM5-203ENST00000409782 IGF1RP08069 1367 aa10.03□□□□□ -0.8
LSM5-203ENST00000409782 CYB5RLQ6IPT4 315 aa10.03□□□□□ -0.8
LSM5-203ENST00000409782 NUDT12Q9BQG2 462 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms