RNA–Protein interactions for RNA: ENST00000397176.6

PRKCQ-202, Transcript of protein kinase C theta, humanhuman

TSL 5 BASIC

Gene PRKCQ, Length 3,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCQ-202ENST00000397176 U2AF2P26368 475 aaKnown RBP eCLIP13.94□□□□□ -0.18
PRKCQ-202ENST00000397176 NUCB2P80303 420 aa13.94□□□□□ -0.18
PRKCQ-202ENST00000397176 NUCB1Q02818 461 aa13.94□□□□□ -0.18
PRKCQ-202ENST00000397176 EXOSC9Q06265 439 aaKnown RBP13.94□□□□□ -0.18
PRKCQ-202ENST00000397176 CARD14Q9BXL6 1004 aa13.94□□□□□ -0.18
PRKCQ-202ENST00000397176 C1orf115Q9H7X2 142 aa13.94□□□□□ -0.18
PRKCQ-202ENST00000397176 TTC12Q9H892 705 aaPredicted RBP13.94□□□□□ -0.18
PRKCQ-202ENST00000397176 NOB1Q9ULX3 412 aaKnown RBP13.94□□□□□ -0.18
PRKCQ-202ENST00000397176 KIF3AQ9Y496 699 aa13.94□□□□□ -0.18
PRKCQ-202ENST00000397176 PDIA4P13667 645 aaKnown RBP13.93□□□□□ -0.18
PRKCQ-202ENST00000397176 SSH1Q8WYL5 1049 aa13.93□□□□□ -0.18
PRKCQ-202ENST00000397176 PDCL2Q8N4E4 241 aa13.93□□□□□ -0.18
PRKCQ-202ENST00000397176 SCAPERQ9BY12 1400 aa13.93□□□□□ -0.18
PRKCQ-202ENST00000397176 CLEC17AQ6ZS10 378 aa13.92□□□□□ -0.18
PRKCQ-202ENST00000397176 PLCB2Q00722 1185 aa13.92□□□□□ -0.18
PRKCQ-202ENST00000397176 BCL2L12Q9HB09 334 aa13.92□□□□□ -0.18
PRKCQ-202ENST00000397176 NOLC1Q14978 699 aaKnown RBP eCLIP13.92□□□□□ -0.18
PRKCQ-202ENST00000397176 BMP2KLQ5H9B9 411 aa13.92□□□□□ -0.18
PRKCQ-202ENST00000397176 MORC1Q86VD1 984 aa13.92□□□□□ -0.18
PRKCQ-202ENST00000397176 CDK11BP21127 795 aaKnown RBP13.91□□□□□ -0.18
PRKCQ-202ENST00000397176 ATF7IPQ6VMQ6 1270 aa13.91□□□□□ -0.18
PRKCQ-202ENST00000397176 WDR63Q8IWG1 891 aa13.91□□□□□ -0.18
PRKCQ-202ENST00000397176 PLXNC1O60486 1568 aa13.9□□□□□ -0.18
PRKCQ-202ENST00000397176 PLA2R1Q13018 1463 aa13.9□□□□□ -0.18
PRKCQ-202ENST00000397176 HMGN5P82970 282 aaKnown RBP13.9□□□□□ -0.18
PRKCQ-202ENST00000397176 U2AF1L5P0DN76 240 aaPredicted RBP13.89□□□□□ -0.19
PRKCQ-202ENST00000397176 U2AF1Q01081 240 aaKnown RBP eCLIP13.89□□□□□ -0.19
PRKCQ-202ENST00000397176 PRIMPOLQ96LW4 560 aa13.89□□□□□ -0.19
PRKCQ-202ENST00000397176 USP25Q9UHP3 1055 aa13.89□□□□□ -0.19
PRKCQ-202ENST00000397176 ZBTB40Q9NUA8 1239 aa13.89□□□□□ -0.19
PRKCQ-202ENST00000397176 URB2Q14146 1524 aaKnown RBP13.88□□□□□ -0.19
PRKCQ-202ENST00000397176 TSPY26PQ9H489 355 aa13.88□□□□□ -0.19
PRKCQ-202ENST00000397176 PTPRGP23470 1445 aa13.88□□□□□ -0.19
PRKCQ-202ENST00000397176 PIBF1Q8WXW3 757 aa13.87□□□□□ -0.19
PRKCQ-202ENST00000397176 ZDHHC9Q9Y397 364 aa13.87□□□□□ -0.19
PRKCQ-202ENST00000397176 CYP2E1P05181 493 aaPredicted RBP13.87□□□□□ -0.19
PRKCQ-202ENST00000397176 ABCC10Q5T3U5 1492 aa13.86□□□□□ -0.19
PRKCQ-202ENST00000397176 ADCY10Q96PN6 1610 aa13.86□□□□□ -0.19
PRKCQ-202ENST00000397176 PLEKHD1A6NEE1 506 aa13.86□□□□□ -0.19
PRKCQ-202ENST00000397176 MTHFSP49914 203 aa13.86□□□□□ -0.19
PRKCQ-202ENST00000397176 RABEP1Q15276 862 aa13.86□□□□□ -0.19
PRKCQ-202ENST00000397176 NOL8Q76FK4 1167 aaKnown RBP13.86□□□□□ -0.19
PRKCQ-202ENST00000397176 GDPD2Q9HCC8 539 aa13.86□□□□□ -0.19
PRKCQ-202ENST00000397176 CDC45O75419 566 aa13.85□□□□□ -0.19
PRKCQ-202ENST00000397176 CROCC2H7BZ55 1655 aa13.85□□□□□ -0.19
PRKCQ-202ENST00000397176 RIOK3O14730 519 aaKnown RBP13.84□□□□□ -0.19
PRKCQ-202ENST00000397176 PLB1Q6P1J6 1458 aa13.84□□□□□ -0.19
PRKCQ-202ENST00000397176 NPC1L1Q9UHC9 1359 aa13.84□□□□□ -0.19
PRKCQ-202ENST00000397176 PHF23Q9BUL5 403 aaPredicted RBP13.84□□□□□ -0.19
PRKCQ-202ENST00000397176 POLR3AO14802 1390 aaPredicted RBP13.83□□□□□ -0.19
PRKCQ-202ENST00000397176 ITSN2Q9NZM3 1697 aa13.83□□□□□ -0.19
PRKCQ-202ENST00000397176 KCNJ4P48050 445 aa13.83□□□□□ -0.2
PRKCQ-202ENST00000397176 IPO4Q8TEX9 1081 aaKnown RBP13.83□□□□□ -0.2
PRKCQ-202ENST00000397176 CCDC141Q6ZP82 1450 aa13.83□□□□□ -0.2
PRKCQ-202ENST00000397176 U2SURPO15042 1029 aaKnown RBP13.83□□□□□ -0.2
PRKCQ-202ENST00000397176 ADCY5O95622 1261 aa13.83□□□□□ -0.2
PRKCQ-202ENST00000397176 GTF2F1P35269 517 aaKnown RBP eCLIP13.83□□□□□ -0.2
PRKCQ-202ENST00000397176 SYNMO15061 1565 aa13.83□□□□□ -0.2
PRKCQ-202ENST00000397176 CHAF1AQ13111 956 aaPredicted RBP13.82□□□□□ -0.2
PRKCQ-202ENST00000397176 GRIN2AQ12879 1464 aa13.82□□□□□ -0.2
PRKCQ-202ENST00000397176 APBB1O00213 710 aa13.82□□□□□ -0.2
PRKCQ-202ENST00000397176 AEBP2Q6ZN18 517 aaPredicted RBP13.82□□□□□ -0.2
PRKCQ-202ENST00000397176 RAPGEF6Q8TEU7 1601 aa13.82□□□□□ -0.2
PRKCQ-202ENST00000397176 ST18O60284 1047 aa13.82□□□□□ -0.2
PRKCQ-202ENST00000397176 MBD3O95983 291 aa13.81□□□□□ -0.2
PRKCQ-202ENST00000397176 GSPT1P15170 499 aaKnown RBP13.81□□□□□ -0.2
PRKCQ-202ENST00000397176 FKBP5Q13451 457 aaPredicted RBP13.81□□□□□ -0.2
PRKCQ-202ENST00000397176 CFAP53Q96M91 514 aa13.81□□□□□ -0.2
PRKCQ-202ENST00000397176 CWC22Q9HCG8 908 aaKnown RBP13.81□□□□□ -0.2
PRKCQ-202ENST00000397176 SPC24Q8NBT2 197 aa13.8□□□□□ -0.2
PRKCQ-202ENST00000397176 CHMP4AQ9BY43 222 aa13.8□□□□□ -0.2
PRKCQ-202ENST00000397176 EIF2AK4Q9P2K8 1649 aaKnown RBP13.8□□□□□ -0.2
PRKCQ-202ENST00000397176 HCLS1P14317 486 aaPredicted RBP13.8□□□□□ -0.2
PRKCQ-202ENST00000397176 NUP160Q12769 1436 aa13.8□□□□□ -0.2
PRKCQ-202ENST00000397176 IPO8O15397 1037 aaKnown RBP13.79□□□□□ -0.2
PRKCQ-202ENST00000397176 GADD45BO75293 160 aaPredicted RBP13.79□□□□□ -0.2
PRKCQ-202ENST00000397176 SLC12A5Q9H2X9 1139 aa13.79□□□□□ -0.2
PRKCQ-202ENST00000397176 LAMC1P11047 1609 aa13.79□□□□□ -0.2
PRKCQ-202ENST00000397176 DISP1Q96F81 1524 aa13.79□□□□□ -0.2
PRKCQ-202ENST00000397176 C16orf71Q8IYS4 520 aaPredicted RBP13.79□□□□□ -0.2
PRKCQ-202ENST00000397176 USP26Q9BXU7 913 aa13.79□□□□□ -0.2
PRKCQ-202ENST00000397176 SCAF11Q99590 1463 aaKnown RBP13.78□□□□□ -0.2
PRKCQ-202ENST00000397176 ERICH4A6NGS2 130 aa13.78□□□□□ -0.2
PRKCQ-202ENST00000397176 SMARCA5O60264 1052 aaPredicted RBP13.78□□□□□ -0.2
PRKCQ-202ENST00000397176 CCDC27Q2M243 656 aa13.78□□□□□ -0.2
PRKCQ-202ENST00000397176 CFAP70Q5T0N1 1121 aa13.78□□□□□ -0.2
PRKCQ-202ENST00000397176 TAF3Q5VWG9 929 aa13.78□□□□□ -0.2
PRKCQ-202ENST00000397176 TRERF1Q96PN7 1200 aa13.78□□□□□ -0.2
PRKCQ-202ENST00000397176 PYCARDQ9ULZ3 195 aa13.78□□□□□ -0.2
PRKCQ-202ENST00000397176 IRX5P78411 483 aaPredicted RBP13.78□□□□□ -0.2
PRKCQ-202ENST00000397176 SYAP1Q96A49 352 aaPredicted RBP13.78□□□□□ -0.2
PRKCQ-202ENST00000397176 DIAPH3Q9NSV4 1193 aa13.78□□□□□ -0.2
PRKCQ-202ENST00000397176 NAA30Q147X3 362 aaPredicted RBP13.77□□□□□ -0.2
PRKCQ-202ENST00000397176 GCC1Q96CN9 775 aa13.77□□□□□ -0.2
PRKCQ-202ENST00000397176 SHANK2Q9UPX8 1470 aa13.77□□□□□ -0.2
PRKCQ-202ENST00000397176 NSD3Q9BZ95 1437 aa13.77□□□□□ -0.2
PRKCQ-202ENST00000397176 ELL2O00472 640 aaPredicted RBP13.77□□□□□ -0.21
PRKCQ-202ENST00000397176 PAXIP1Q6ZW49 1069 aaPredicted RBP13.77□□□□□ -0.21
PRKCQ-202ENST00000397176 MYO5CQ9NQX4 1742 aa13.77□□□□□ -0.21
PRKCQ-202ENST00000397176 PPIP5K1Q6PFW1 1433 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms