RNA–Protein interactions for RNA: ENST00000384188.1

RNU6-439P-201, Transcript of RNA, U6 small nuclear 439, pseudogene, humanhuman

BASIC

Gene RNU6-439P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-439P-201ENST00000384188 KIAA1468Q9P260 1216 aa2.59□□□□□ -1.99
RNU6-439P-201ENST00000384188 LHX6Q9UPM6 363 aa2.59□□□□□ -1.99
RNU6-439P-201ENST00000384188 SALL2Q9Y467 1007 aaPredicted RBP2.59□□□□□ -1.99
RNU6-439P-201ENST00000384188 PCDHB15Q9Y5E8 787 aa2.59□□□□□ -1.99
RNU6-439P-201ENST00000384188 SHROOM4Q9ULL8 1493 aa2.58□□□□□ -2
RNU6-439P-201ENST00000384188 USP17L15C9J2P7 530 aa2.58□□□□□ -2
RNU6-439P-201ENST00000384188 USP17L10C9JJH3 530 aa2.58□□□□□ -2
RNU6-439P-201ENST00000384188 USP17L13C9JLJ4 530 aa2.58□□□□□ -2
RNU6-439P-201ENST00000384188 USP17L12C9JPN9 530 aa2.58□□□□□ -2
RNU6-439P-201ENST00000384188 USP17L11C9JVI0 530 aa2.58□□□□□ -2
RNU6-439P-201ENST00000384188 USP17L21D6R901 530 aa2.58□□□□□ -2
RNU6-439P-201ENST00000384188 USP17L18D6R9N7 530 aa2.58□□□□□ -2
RNU6-439P-201ENST00000384188 USP17L22D6RA61 530 aa2.58□□□□□ -2
RNU6-439P-201ENST00000384188 USP17L17D6RBQ6 530 aa2.58□□□□□ -2
RNU6-439P-201ENST00000384188 USP17L19D6RCP7 530 aa2.58□□□□□ -2
RNU6-439P-201ENST00000384188 CFAP99D6REC4 459 aa2.58□□□□□ -2
RNU6-439P-201ENST00000384188 USP17L20D6RJB6 530 aa2.58□□□□□ -2
RNU6-439P-201ENST00000384188 ARHGAP33O14559 1287 aa2.58□□□□□ -2
RNU6-439P-201ENST00000384188 PTCD1O75127 700 aaKnown RBP2.58□□□□□ -2
RNU6-439P-201ENST00000384188 MYCP01106 439 aaPredicted RBP2.58□□□□□ -2
RNU6-439P-201ENST00000384188 COL9A1P20849 921 aa2.58□□□□□ -2
RNU6-439P-201ENST00000384188 CDK11BP21127 795 aaKnown RBP2.58□□□□□ -2
RNU6-439P-201ENST00000384188 ATP2B4P23634 1241 aa2.58□□□□□ -2
RNU6-439P-201ENST00000384188 USP17L24Q0WX57 530 aa2.58□□□□□ -2
RNU6-439P-201ENST00000384188 NR6A1Q15406 480 aa2.58□□□□□ -2
RNU6-439P-201ENST00000384188 LYPD8Q6UX82 237 aa2.58□□□□□ -2
RNU6-439P-201ENST00000384188 ZBTB33Q86T24 672 aa2.58□□□□□ -2
RNU6-439P-201ENST00000384188 GLYCTKQ8IVS8 523 aa2.58□□□□□ -2
RNU6-439P-201ENST00000384188 LARGE2Q8N3Y3 721 aa2.58□□□□□ -2
RNU6-439P-201ENST00000384188 ANKK1Q8NFD2 765 aa2.58□□□□□ -2
RNU6-439P-201ENST00000384188 LRRN4Q8WUT4 740 aa2.58□□□□□ -2
RNU6-439P-201ENST00000384188 VTI1AQ96AJ9 217 aa2.58□□□□□ -2
RNU6-439P-201ENST00000384188 USB1Q9BQ65 265 aaKnown RBP2.58□□□□□ -2
RNU6-439P-201ENST00000384188 TRIM34Q9BYJ4 488 aa2.58□□□□□ -2
RNU6-439P-201ENST00000384188 HMX1Q9NP08 348 aaPredicted RBP2.58□□□□□ -2
RNU6-439P-201ENST00000384188 CDKN2AIPQ9NXV6 580 aaPredicted RBP2.58□□□□□ -2
RNU6-439P-201ENST00000384188 DOLKQ9UPQ8 538 aa2.58□□□□□ -2
RNU6-439P-201ENST00000384188 CDK11AQ9UQ88 783 aaPredicted RBP2.58□□□□□ -2
RNU6-439P-201ENST00000384188 CHMP3Q9Y3E7 222 aa2.58□□□□□ -2
RNU6-439P-201ENST00000384188 ACTN4O43707 911 aaKnown RBP2.57□□□□□ -2
RNU6-439P-201ENST00000384188 CCNYL3P0C7X3 344 aa2.57□□□□□ -2
RNU6-439P-201ENST00000384188 TCF3P15923 654 aa2.57□□□□□ -2
RNU6-439P-201ENST00000384188 JUNDP17535 347 aa2.57□□□□□ -2
RNU6-439P-201ENST00000384188 NCLP19338 710 aaKnown RBP2.57□□□□□ -2
RNU6-439P-201ENST00000384188 SEC13P55735 322 aa2.57□□□□□ -2
RNU6-439P-201ENST00000384188 SF3B2Q13435 895 aaKnown RBP2.57□□□□□ -2
RNU6-439P-201ENST00000384188 COL19A1Q14993 1142 aa2.57□□□□□ -2
RNU6-439P-201ENST00000384188 TMEM164Q5U3C3 297 aa2.57□□□□□ -2
RNU6-439P-201ENST00000384188 GPR153Q6NV75 609 aa2.57□□□□□ -2
RNU6-439P-201ENST00000384188 PDXDC2PQ6P474 469 aa2.57□□□□□ -2
RNU6-439P-201ENST00000384188 NYAP1Q6ZVC0 841 aa2.57□□□□□ -2
RNU6-439P-201ENST00000384188 DZIP3Q86Y13 1208 aaKnown RBP2.57□□□□□ -2
RNU6-439P-201ENST00000384188 C1orf216Q8TAB5 229 aa2.57□□□□□ -2
RNU6-439P-201ENST00000384188 SLC10A4Q96EP9 437 aa2.57□□□□□ -2
RNU6-439P-201ENST00000384188 UCN2Q96RP3 112 aa2.57□□□□□ -2
RNU6-439P-201ENST00000384188 ARHGAP9Q9BRR9 750 aa2.57□□□□□ -2
RNU6-439P-201ENST00000384188 ZBED2Q9BTP6 218 aa2.57□□□□□ -2
RNU6-439P-201ENST00000384188 MRS2Q9HD23 443 aa2.57□□□□□ -2
RNU6-439P-201ENST00000384188 DNAAF2Q9NVR5 837 aaKnown RBP2.57□□□□□ -2
RNU6-439P-201ENST00000384188 MKRN1Q9UHC7 482 aaKnown RBP2.57□□□□□ -2
RNU6-439P-201ENST00000384188 PCDHB9Q9Y5E1 797 aa2.57□□□□□ -2
RNU6-439P-201ENST00000384188 SOWAHDA6NJG2 315 aa2.56□□□□□ -2
RNU6-439P-201ENST00000384188 TMEM88BA6NKF7 163 aa2.56□□□□□ -2
RNU6-439P-201ENST00000384188 SMAPO00193 183 aa2.56□□□□□ -2
RNU6-439P-201ENST00000384188 NDUFB5O43674 189 aa2.56□□□□□ -2
RNU6-439P-201ENST00000384188 FBXO45P0C2W1 286 aa2.56□□□□□ -2
RNU6-439P-201ENST00000384188 HOXB1P14653 301 aaPredicted RBP2.56□□□□□ -2
RNU6-439P-201ENST00000384188 VAMP1P23763 118 aa2.56□□□□□ -2
RNU6-439P-201ENST00000384188 PPP4CP60510 307 aa2.56□□□□□ -2
RNU6-439P-201ENST00000384188 ZC3H6P61129 1189 aaKnown RBP2.56□□□□□ -2
RNU6-439P-201ENST00000384188 ATP2B2Q01814 1243 aa2.56□□□□□ -2
RNU6-439P-201ENST00000384188 USP4Q13107 963 aa2.56□□□□□ -2
RNU6-439P-201ENST00000384188 NCOA4Q13772 614 aa2.56□□□□□ -2
RNU6-439P-201ENST00000384188 GNL2Q13823 731 aaKnown RBP2.56□□□□□ -2
RNU6-439P-201ENST00000384188 AGERQ15109 404 aa2.56□□□□□ -2
RNU6-439P-201ENST00000384188 PROX2Q3B8N5 592 aa2.56□□□□□ -2
RNU6-439P-201ENST00000384188 TBC1D9Q6ZT07 1266 aa2.56□□□□□ -2
RNU6-439P-201ENST00000384188 BPHLQ86WA6 291 aaPredicted RBP2.56□□□□□ -2
RNU6-439P-201ENST00000384188 ANKMY2Q8IV38 441 aa2.56□□□□□ -2
RNU6-439P-201ENST00000384188 SEPT12Q8IYM1 358 aa2.56□□□□□ -2
RNU6-439P-201ENST00000384188 PLPP7Q8NBV4 271 aa2.56□□□□□ -2
RNU6-439P-201ENST00000384188 TTC16Q8NEE8 873 aa2.56□□□□□ -2
RNU6-439P-201ENST00000384188 ADAMTS19Q8TE59 1207 aa2.56□□□□□ -2
RNU6-439P-201ENST00000384188 MRRFQ96E11 262 aaKnown RBP2.56□□□□□ -2
RNU6-439P-201ENST00000384188 PCDHGC3Q9UN70 934 aa2.56□□□□□ -2
RNU6-439P-201ENST00000384188 PCDHB3Q9Y5E6 796 aa2.56□□□□□ -2
RNU6-439P-201ENST00000384188 ERBB3P21860 1342 aa2.56□□□□□ -2
RNU6-439P-201ENST00000384188 H3BRB1 525 aa2.55□□□□□ -2
RNU6-439P-201ENST00000384188 TK2O00142 265 aa2.55□□□□□ -2
RNU6-439P-201ENST00000384188 ABL1P00519 1130 aa2.55□□□□□ -2
RNU6-439P-201ENST00000384188 SSFA2P28290 1259 aa2.55□□□□□ -2
RNU6-439P-201ENST00000384188 MAPK1P28482 360 aa2.55□□□□□ -2
RNU6-439P-201ENST00000384188 PDE3BQ13370 1112 aa2.55□□□□□ -2
RNU6-439P-201ENST00000384188 MSS51Q4VC12 460 aa2.55□□□□□ -2
RNU6-439P-201ENST00000384188 CDCA8Q53HL2 280 aa2.55□□□□□ -2
RNU6-439P-201ENST00000384188 MORN1Q5T089 497 aa2.55□□□□□ -2
RNU6-439P-201ENST00000384188 KANK4Q5T7N3 995 aaPredicted RBP2.55□□□□□ -2
RNU6-439P-201ENST00000384188 SAMD7Q7Z3H4 446 aa2.55□□□□□ -2
RNU6-439P-201ENST00000384188 TXNDC2Q86VQ3 553 aa2.55□□□□□ -2
RNU6-439P-201ENST00000384188 OGFOD1Q8N543 542 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms