RNA–Protein interactions for RNA: ENST00000236698.9

STAG1-201, Transcript of stromal antigen 1, humanhuman

TSL 1 (best) BASIC

Gene STAG1, Length 5,951 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1-201ENST00000236698 GABBR1Q9UBS5 961 aa8.38□□□□□ -1.07
STAG1-201ENST00000236698 CNTLNQ9NXG0 1405 aa8.38□□□□□ -1.07
STAG1-201ENST00000236698 CHRM1P11229 460 aaPredicted RBP8.38□□□□□ -1.07
STAG1-201ENST00000236698 GOLGA2Q08379 1002 aa8.38□□□□□ -1.07
STAG1-201ENST00000236698 SRPK2P78362 688 aaKnown RBP8.38□□□□□ -1.07
STAG1-201ENST00000236698 MYBBP1AQ9BQG0 1328 aaKnown RBP8.38□□□□□ -1.07
STAG1-201ENST00000236698 MAP4K4O95819 1239 aaPredicted RBP8.38□□□□□ -1.07
STAG1-201ENST00000236698 MAGEC2Q9UBF1 373 aaPredicted RBP8.38□□□□□ -1.07
STAG1-201ENST00000236698 PRPF38AQ8NAV1 312 aaKnown RBP8.38□□□□□ -1.07
STAG1-201ENST00000236698 MAP7D2Q96T17 732 aa8.38□□□□□ -1.07
STAG1-201ENST00000236698 TCEAL9Q9UHQ7 104 aa8.38□□□□□ -1.07
STAG1-201ENST00000236698 DRC7Q8IY82 874 aa8.37□□□□□ -1.07
STAG1-201ENST00000236698 TRIM34Q9BYJ4 488 aa8.37□□□□□ -1.07
STAG1-201ENST00000236698 SETSIPP0DME0 302 aa8.37□□□□□ -1.07
STAG1-201ENST00000236698 NBPF9Q3BBW0 867 aa8.37□□□□□ -1.07
STAG1-201ENST00000236698 PCF11O94913 1555 aaKnown RBP8.37□□□□□ -1.07
STAG1-201ENST00000236698 SREK1Q8WXA9 508 aaKnown RBP8.37□□□□□ -1.07
STAG1-201ENST00000236698 GOLGA6CA6NDK9 693 aa8.36□□□□□ -1.07
STAG1-201ENST00000236698 GOLGA6BA6NDN3 693 aa8.36□□□□□ -1.07
STAG1-201ENST00000236698 SPDYE4A6NLX3 237 aa8.36□□□□□ -1.07
STAG1-201ENST00000236698 GOLGA6DP0CG33 693 aa8.36□□□□□ -1.07
STAG1-201ENST00000236698 USP5P45974 858 aa8.36□□□□□ -1.07
STAG1-201ENST00000236698 BRD3Q15059 726 aa8.36□□□□□ -1.07
STAG1-201ENST00000236698 CC2D1AQ6P1N0 951 aaPredicted RBP8.36□□□□□ -1.07
STAG1-201ENST00000236698 GOLGA6AQ9NYA3 693 aa8.36□□□□□ -1.07
STAG1-201ENST00000236698 DAPK1P53355 1430 aa8.36□□□□□ -1.07
STAG1-201ENST00000236698 SNAPC4Q5SXM2 1469 aa8.36□□□□□ -1.07
STAG1-201ENST00000236698 BIRC2Q13490 618 aa8.36□□□□□ -1.07
STAG1-201ENST00000236698 SCAPERQ9BY12 1400 aa8.36□□□□□ -1.07
STAG1-201ENST00000236698 DYTNA2CJ06 578 aa8.36□□□□□ -1.07
STAG1-201ENST00000236698 MTA3Q9BTC8 594 aa8.36□□□□□ -1.07
STAG1-201ENST00000236698 HNRNPMP52272 730 aaKnown RBP eCLIP8.36□□□□□ -1.071e-6■■■■■ 27.3
STAG1-201ENST00000236698 CCDC191Q8NCU4 936 aa8.36□□□□□ -1.07
STAG1-201ENST00000236698 TMA7Q9Y2S6 64 aaKnown RBP8.36□□□□□ -1.07
STAG1-201ENST00000236698 UGGT2Q9NYU1 1516 aa8.36□□□□□ -1.07
STAG1-201ENST00000236698 KLHL42Q9P2K6 505 aa8.35□□□□□ -1.07
STAG1-201ENST00000236698 C9orf84Q5VXU9 1444 aa8.35□□□□□ -1.07
STAG1-201ENST00000236698 TPM3P06753 285 aa8.35□□□□□ -1.07
STAG1-201ENST00000236698 AK7Q96M32 723 aa8.35□□□□□ -1.07
STAG1-201ENST00000236698 CTDP1Q9Y5B0 961 aaPredicted RBP8.35□□□□□ -1.07
STAG1-201ENST00000236698 KIF3BO15066 747 aa8.35□□□□□ -1.07
STAG1-201ENST00000236698 TSHZ1Q6ZSZ6 1077 aa8.35□□□□□ -1.07
STAG1-201ENST00000236698 IVNS1ABPQ9Y6Y0 642 aa8.35□□□□□ -1.07
STAG1-201ENST00000236698 PRG4Q92954 1404 aaPredicted RBP8.35□□□□□ -1.07
STAG1-201ENST00000236698 BRD4O60885 1362 aaPredicted RBP8.35□□□□□ -1.07
STAG1-201ENST00000236698 HMGB3O15347 200 aaKnown RBP8.35□□□□□ -1.07
STAG1-201ENST00000236698 TRIM29Q14134 588 aa8.35□□□□□ -1.07
STAG1-201ENST00000236698 VGFO15240 615 aaPredicted RBP8.35□□□□□ -1.07
STAG1-201ENST00000236698 CCP110O43303 1012 aa8.34□□□□□ -1.07
STAG1-201ENST00000236698 TDO2P48775 406 aa8.34□□□□□ -1.07
STAG1-201ENST00000236698 SYAP1Q96A49 352 aaPredicted RBP8.34□□□□□ -1.07
STAG1-201ENST00000236698 DCTN1Q14203 1278 aa8.34□□□□□ -1.07
STAG1-201ENST00000236698 MPHOSPH6Q99547 160 aaKnown RBP8.34□□□□□ -1.07
STAG1-201ENST00000236698 ZNF500O60304 480 aaPredicted RBP8.34□□□□□ -1.07
STAG1-201ENST00000236698 CCDC175P0C221 793 aa8.34□□□□□ -1.07
STAG1-201ENST00000236698 CSPP1Q1MSJ5 1256 aa8.34□□□□□ -1.07
STAG1-201ENST00000236698 TEX35Q5T0J7 233 aa8.34□□□□□ -1.07
STAG1-201ENST00000236698 LCA5Q86VQ0 697 aa8.33□□□□□ -1.08
STAG1-201ENST00000236698 CT47B1P0C2W7 299 aaPredicted RBP8.33□□□□□ -1.08
STAG1-201ENST00000236698 OSCARQ8IYS5 282 aa8.33□□□□□ -1.08
STAG1-201ENST00000236698 CCDC85AQ96PX6 553 aaPredicted RBP8.33□□□□□ -1.08
STAG1-201ENST00000236698 MAPK8IP3Q9UPT6 1336 aa8.33□□□□□ -1.08
STAG1-201ENST00000236698 ANKRD30BQ9BXX2 1392 aa8.33□□□□□ -1.08
STAG1-201ENST00000236698 NCOA1Q15788 1441 aa8.33□□□□□ -1.08
STAG1-201ENST00000236698 TRAK2O60296 914 aa8.33□□□□□ -1.08
STAG1-201ENST00000236698 SEMA3FQ13275 785 aa8.33□□□□□ -1.08
STAG1-201ENST00000236698 WDR75Q8IWA0 830 aaKnown RBP8.33□□□□□ -1.08
STAG1-201ENST00000236698 TCOF1Q13428 1488 aaKnown RBP8.33□□□□□ -1.08
STAG1-201ENST00000236698 ST20-MTHFSA0A0A6YYL1 179 aa8.33□□□□□ -1.08
STAG1-201ENST00000236698 ACRBPQ8NEB7 543 aa8.33□□□□□ -1.08
STAG1-201ENST00000236698 EPB41L2O43491 1005 aaKnown RBP8.32□□□□□ -1.08
STAG1-201ENST00000236698 CCDC146Q8IYE0 955 aa8.32□□□□□ -1.08
STAG1-201ENST00000236698 TPX2Q9ULW0 747 aaKnown RBP8.32□□□□□ -1.08
STAG1-201ENST00000236698 CCDC141Q6ZP82 1450 aa8.32□□□□□ -1.08
STAG1-201ENST00000236698 MAP2K1Q02750 393 aaPredicted RBP8.32□□□□□ -1.08
STAG1-201ENST00000236698 HS6ST3Q8IZP7 471 aa8.32□□□□□ -1.08
STAG1-201ENST00000236698 POGKQ9P215 609 aa8.32□□□□□ -1.08
STAG1-201ENST00000236698 MYBPC2Q14324 1141 aa8.32□□□□□ -1.08
STAG1-201ENST00000236698 MFSD4BQ5TF39 518 aa8.32□□□□□ -1.08
STAG1-201ENST00000236698 OTUD6BQ8N6M0 293 aa8.31□□□□□ -1.08
STAG1-201ENST00000236698 MRRFQ96E11 262 aaKnown RBP8.31□□□□□ -1.08
STAG1-201ENST00000236698 ACBD3Q9H3P7 528 aa8.31□□□□□ -1.08
STAG1-201ENST00000236698 RPRD2Q5VT52 1461 aaKnown RBP8.31□□□□□ -1.08
STAG1-201ENST00000236698 RBM19Q9Y4C8 960 aaKnown RBP8.31□□□□□ -1.08
STAG1-201ENST00000236698 KDM4CQ9H3R0 1056 aa8.31□□□□□ -1.08
STAG1-201ENST00000236698 RCAN3Q9UKA8 241 aa8.31□□□□□ -1.08
STAG1-201ENST00000236698 ZHX1Q9UKY1 873 aaPredicted RBP8.31□□□□□ -1.08
STAG1-201ENST00000236698 KIF7Q2M1P5 1343 aa8.31□□□□□ -1.08
STAG1-201ENST00000236698 PRDM2Q13029 1718 aa8.31□□□□□ -1.08
STAG1-201ENST00000236698 MSL3Q8N5Y2 521 aaKnown RBP8.31□□□□□ -1.08
STAG1-201ENST00000236698 UBA5Q9GZZ9 404 aa8.31□□□□□ -1.08
STAG1-201ENST00000236698 SGSM3Q96HU1 749 aa8.3□□□□□ -1.08
STAG1-201ENST00000236698 PDCL3Q9H2J4 239 aa8.3□□□□□ -1.08
STAG1-201ENST00000236698 HDGFL2Q7Z4V5 671 aaPredicted RBP8.3□□□□□ -1.08
STAG1-201ENST00000236698 IRF5Q13568 498 aa8.3□□□□□ -1.08
STAG1-201ENST00000236698 FOXD1Q16676 465 aa8.3□□□□□ -1.08
STAG1-201ENST00000236698 MORC1Q86VD1 984 aa8.3□□□□□ -1.08
STAG1-201ENST00000236698 TSPYL1Q9H0U9 437 aa8.3□□□□□ -1.08
STAG1-201ENST00000236698 COMMD10Q9Y6G5 202 aa8.3□□□□□ -1.08
STAG1-201ENST00000236698 PTPN23Q9H3S7 1636 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms