RNA–Protein interactions for RNA: ENSMUST00000225438.1

Shroom3-211, Transcript of Protein Shroom3, mousemouse

BASIC

Gene Shroom3, Length 5,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-211ENSMUST00000225438 Gimap6Q8K349 305 aa20.62■□□□□ 0.89
Shroom3-211ENSMUST00000225438 Tmc1Q8R4P5 757 aa20.62■□□□□ 0.89
Shroom3-211ENSMUST00000225438 Gm21698A0A087WQP8 267 aa20.62■□□□□ 0.89
Shroom3-211ENSMUST00000225438 Gm21671G3UY31 267 aa20.62■□□□□ 0.89
Shroom3-211ENSMUST00000225438 Q7TT23 1179 aa20.61■□□□□ 0.89
Shroom3-211ENSMUST00000225438 Arhgap5P97393 1501 aa20.61■□□□□ 0.89
Shroom3-211ENSMUST00000225438 Map3k5O35099 1380 aa20.61■□□□□ 0.89
Shroom3-211ENSMUST00000225438 Nol8Q3UHX0 1147 aaKnown RBP20.61■□□□□ 0.89
Shroom3-211ENSMUST00000225438 Dctn1O08788 1281 aa20.61■□□□□ 0.89
Shroom3-211ENSMUST00000225438 TbcaP48428 108 aaKnown RBP20.61■□□□□ 0.89
Shroom3-211ENSMUST00000225438 Rad54l2Q99NG0 1466 aa20.61■□□□□ 0.89
Shroom3-211ENSMUST00000225438 Ddx54Q8K4L0 874 aaKnown RBP20.61■□□□□ 0.89
Shroom3-211ENSMUST00000225438 Gcc1Q9D4H2 778 aa20.6■□□□□ 0.89
Shroom3-211ENSMUST00000225438 Apaf1O88879 1249 aa20.6■□□□□ 0.89
Shroom3-211ENSMUST00000225438 Tubb6Q922F4 447 aa20.6■□□□□ 0.89
Shroom3-211ENSMUST00000225438 SelenooQ9DBC0 667 aa20.6■□□□□ 0.89
Shroom3-211ENSMUST00000225438 Eif3aP23116 1344 aaKnown RBP20.6■□□□□ 0.89
Shroom3-211ENSMUST00000225438 Zfp644E9QA22 1323 aa20.6■□□□□ 0.89
Shroom3-211ENSMUST00000225438 Dennd6aQ8BH65 605 aa20.6■□□□□ 0.89
Shroom3-211ENSMUST00000225438 IkQ9Z1M8 557 aaKnown RBP20.59■□□□□ 0.89
Shroom3-211ENSMUST00000225438 Stk11ipQ3TAA7 1072 aa20.59■□□□□ 0.89
Shroom3-211ENSMUST00000225438 Plekhd1B2RPU2 505 aa20.58■□□□□ 0.89
Shroom3-211ENSMUST00000225438 Pip4k2aO70172 405 aa20.58■□□□□ 0.89
Shroom3-211ENSMUST00000225438 Cabp2Q9JLK4 216 aa20.58■□□□□ 0.88
Shroom3-211ENSMUST00000225438 Zkscan1Q8BGS3 561 aaKnown RBP20.57■□□□□ 0.88
Shroom3-211ENSMUST00000225438 Tmco3Q8BH01 678 aa20.57■□□□□ 0.88
Shroom3-211ENSMUST00000225438 Erc1Q99MI1 1120 aa20.57■□□□□ 0.88
Shroom3-211ENSMUST00000225438 Cdkn1cP49919 348 aa20.56■□□□□ 0.88
Shroom3-211ENSMUST00000225438 Kiaa0753Q6A000 959 aa20.56■□□□□ 0.88
Shroom3-211ENSMUST00000225438 Tnpo1Q8BFY9 898 aaKnown RBP20.56■□□□□ 0.88
Shroom3-211ENSMUST00000225438 Efcab5A0JP43 1406 aa20.56■□□□□ 0.88
Shroom3-211ENSMUST00000225438 Ccdc96Q9CR92 584 aa20.56■□□□□ 0.88
Shroom3-211ENSMUST00000225438 Babam1Q3UI43 333 aa20.56■□□□□ 0.88
Shroom3-211ENSMUST00000225438 Speer4bQ9D9F7 267 aa20.55■□□□□ 0.88
Shroom3-211ENSMUST00000225438 Trim34bJ3QNR8 485 aa20.55■□□□□ 0.88
Shroom3-211ENSMUST00000225438 Rhot2Q8JZN7 620 aa20.55■□□□□ 0.88
Shroom3-211ENSMUST00000225438 TkfcQ8VC30 578 aa20.55■□□□□ 0.88
Shroom3-211ENSMUST00000225438 Tango6Q8C3S2 1079 aa20.55■□□□□ 0.88
Shroom3-211ENSMUST00000225438 Cdk19Q8BWD8 501 aa20.53■□□□□ 0.88
Shroom3-211ENSMUST00000225438 Cwc27Q3TKY6 469 aa20.53■□□□□ 0.88
Shroom3-211ENSMUST00000225438 Mapk8ip1Q9WVI9 707 aa20.53■□□□□ 0.88
Shroom3-211ENSMUST00000225438 Dhx8A2A4P0 1244 aaKnown RBP20.53■□□□□ 0.88
Shroom3-211ENSMUST00000225438 Myom3A2ABU4 1439 aa20.53■□□□□ 0.88
Shroom3-211ENSMUST00000225438 Gm21663A0A0G2JE01 267 aa20.53■□□□□ 0.88
Shroom3-211ENSMUST00000225438 Gm7361D3Z6R1 267 aa20.53■□□□□ 0.88
Shroom3-211ENSMUST00000225438 5031410I06RikE9Q4E0 267 aa20.53■□□□□ 0.88
Shroom3-211ENSMUST00000225438 Gm1979E9QAN3 267 aa20.53■□□□□ 0.88
Shroom3-211ENSMUST00000225438 Gm5862K7N5V5 267 aa20.53■□□□□ 0.88
Shroom3-211ENSMUST00000225438 Gm10220K7N660 267 aa20.53■□□□□ 0.88
Shroom3-211ENSMUST00000225438 NefhP19246 1090 aa20.53■□□□□ 0.88
Shroom3-211ENSMUST00000225438 Prpf4bQ61136 1007 aaKnown RBP20.52■□□□□ 0.88
Shroom3-211ENSMUST00000225438 Nop14Q8R3N1 860 aaKnown RBP20.52■□□□□ 0.88
Shroom3-211ENSMUST00000225438 Top2aQ01320 1528 aaKnown RBP20.52■□□□□ 0.88
Shroom3-211ENSMUST00000225438 Stim1P70302 685 aa20.52■□□□□ 0.88
Shroom3-211ENSMUST00000225438 Zfp444Q3TDV8 331 aaKnown RBP20.52■□□□□ 0.88
Shroom3-211ENSMUST00000225438 Cwc15Q9JHS9 229 aaKnown RBP20.52■□□□□ 0.88
Shroom3-211ENSMUST00000225438 Ell2Q3UKU1 639 aa20.52■□□□□ 0.88
Shroom3-211ENSMUST00000225438 Trim34aQ99PP6 485 aa20.52■□□□□ 0.88
Shroom3-211ENSMUST00000225438 Rsph6aQ8CDR2 708 aa20.52■□□□□ 0.87
Shroom3-211ENSMUST00000225438 Lrrc45Q8CIM1 670 aa20.51■□□□□ 0.87
Shroom3-211ENSMUST00000225438 Gm21680A0A0G2JGR8 267 aa20.51■□□□□ 0.87
Shroom3-211ENSMUST00000225438 Ncbp1Q3UYV9 790 aaKnown RBP20.51■□□□□ 0.87
Shroom3-211ENSMUST00000225438 Luc7lQ9CYI4 371 aaKnown RBP20.51■□□□□ 0.87
Shroom3-211ENSMUST00000225438 Jakmip1Q8BVL9 626 aa20.5■□□□□ 0.87
Shroom3-211ENSMUST00000225438 Cep112Q5PR68 954 aa20.5■□□□□ 0.87
Shroom3-211ENSMUST00000225438 Ttc19Q8CC21 365 aa20.5■□□□□ 0.87
Shroom3-211ENSMUST00000225438 Ercc6lQ8BHK9 1240 aa20.5■□□□□ 0.87
Shroom3-211ENSMUST00000225438 4930572O03RikQ8C5Y0 211 aa20.49■□□□□ 0.87
Shroom3-211ENSMUST00000225438 Cnnm3Q32NY4 713 aa20.49■□□□□ 0.87
Shroom3-211ENSMUST00000225438 TnmdQ9EP64 317 aa20.49■□□□□ 0.87
Shroom3-211ENSMUST00000225438 Dusp27Q148W8 1138 aa20.49■□□□□ 0.87
Shroom3-211ENSMUST00000225438 Flad1Q8R123 492 aa20.49■□□□□ 0.87
Shroom3-211ENSMUST00000225438 Arhgap31A6X8Z5 1425 aa20.49■□□□□ 0.87
Shroom3-211ENSMUST00000225438 Srgap3Q812A2 1099 aa20.48■□□□□ 0.87
Shroom3-211ENSMUST00000225438 Erlin2Q8BFZ9 340 aa20.48■□□□□ 0.87
Shroom3-211ENSMUST00000225438 Hoxa7P02830 229 aa20.48■□□□□ 0.87
Shroom3-211ENSMUST00000225438 Rapgef4Q9EQZ6 1011 aa20.48■□□□□ 0.87
Shroom3-211ENSMUST00000225438 Urb2E9Q7L1 1524 aaKnown RBP20.47■□□□□ 0.87
Shroom3-211ENSMUST00000225438 Slc13a4Q8BZ82 625 aa20.47■□□□□ 0.87
Shroom3-211ENSMUST00000225438 Erich4Q3UNU4 136 aa20.47■□□□□ 0.87
Shroom3-211ENSMUST00000225438 Krt85Q9Z2T6 507 aa20.47■□□□□ 0.87
Shroom3-211ENSMUST00000225438 Cyp26c1B2RXA7 518 aa20.46■□□□□ 0.87
Shroom3-211ENSMUST00000225438 Afap1Q80YS6 731 aa20.46■□□□□ 0.87
Shroom3-211ENSMUST00000225438 Cdc45Q9Z1X9 566 aa20.46■□□□□ 0.87
Shroom3-211ENSMUST00000225438 Larp1bA0A0A6YXJ7 370 aaKnown RBP20.46■□□□□ 0.87
Shroom3-211ENSMUST00000225438 Cdkl5Q3UTQ8 938 aa20.46■□□□□ 0.87
Shroom3-211ENSMUST00000225438 Zscan20B2KFW1 1030 aa20.46■□□□□ 0.87
Shroom3-211ENSMUST00000225438 Slc4a2P13808 1237 aaKnown RBP20.46■□□□□ 0.87
Shroom3-211ENSMUST00000225438 Krt84Q99M73 603 aa20.46■□□□□ 0.87
Shroom3-211ENSMUST00000225438 Washc2Q6PGL7 1334 aa20.46■□□□□ 0.87
Shroom3-211ENSMUST00000225438 Gsdma2Q32M21 443 aa20.46■□□□□ 0.87
Shroom3-211ENSMUST00000225438 Bag1Q60739 355 aa20.46■□□□□ 0.87
Shroom3-211ENSMUST00000225438 IbspQ61711 324 aa20.46■□□□□ 0.87
Shroom3-211ENSMUST00000225438 Fsd1Q7TPM6 496 aa20.46■□□□□ 0.87
Shroom3-211ENSMUST00000225438 Cog6Q8R3I3 657 aa20.45■□□□□ 0.86
Shroom3-211ENSMUST00000225438 Exoc6bA6H5Z3 810 aa20.45■□□□□ 0.86
Shroom3-211ENSMUST00000225438 Cdc37l1Q9CZP7 335 aa20.45■□□□□ 0.86
Shroom3-211ENSMUST00000225438 Fchsd2Q3USJ8 740 aa20.45■□□□□ 0.86
Shroom3-211ENSMUST00000225438 AcrbpQ3V140 540 aa20.44■□□□□ 0.86
Shroom3-211ENSMUST00000225438 Nat10Q8K224 1024 aaKnown RBP20.44■□□□□ 0.86
Retrieved 100 of 22,080 RNA–protein pairs in 12.5 ms