RNA–Protein interactions for RNA: ENSMUST00000168203.1

Ebf3-203, Transcript of Transcription factor COE3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ebf3, Length 3,724 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-203ENSMUST00000168203 Ak9G3UYQ4 1894 aa15.44■□□□□ 0.06
Ebf3-203ENSMUST00000168203 Tmco5bQ80X59 307 aa15.43■□□□□ 0.06
Ebf3-203ENSMUST00000168203 Clasp1Q80TV8 1535 aaKnown RBP15.43■□□□□ 0.06
Ebf3-203ENSMUST00000168203 Ehbp1l1Q99MS7 1716 aa15.43■□□□□ 0.06
Ebf3-203ENSMUST00000168203 Map4k4P97820 1233 aaKnown RBP15.43■□□□□ 0.06
Ebf3-203ENSMUST00000168203 Tsen2Q6P7W5 460 aa15.43■□□□□ 0.06
Ebf3-203ENSMUST00000168203 TimelessQ9R1X4 1197 aa15.43■□□□□ 0.06
Ebf3-203ENSMUST00000168203 Q9D9H8 365 aa15.42■□□□□ 0.06
Ebf3-203ENSMUST00000168203 Yeats2Q3TUF7 1407 aa15.42■□□□□ 0.06
Ebf3-203ENSMUST00000168203 Adgrl3Q80TS3 1537 aa15.42■□□□□ 0.06
Ebf3-203ENSMUST00000168203 Ubap1lG3UW59 384 aa15.42■□□□□ 0.06
Ebf3-203ENSMUST00000168203 RereQ80TZ9 1558 aa15.42■□□□□ 0.06
Ebf3-203ENSMUST00000168203 Gsto1O09131 240 aa15.42■□□□□ 0.06
Ebf3-203ENSMUST00000168203 Uspl1Q3ULM6 1089 aa15.42■□□□□ 0.06
Ebf3-203ENSMUST00000168203 Ush1cQ9ES64 910 aa15.42■□□□□ 0.06
Ebf3-203ENSMUST00000168203 Rabep1O35551 862 aa15.41■□□□□ 0.06
Ebf3-203ENSMUST00000168203 Prrc2bQ7TPM1 1486 aaKnown RBP15.41■□□□□ 0.06
Ebf3-203ENSMUST00000168203 Synj2Q9D2G5 1434 aa15.4■□□□□ 0.06
Ebf3-203ENSMUST00000168203 TnikP83510 1323 aa15.4■□□□□ 0.06
Ebf3-203ENSMUST00000168203 Akap12Q9WTQ5 1684 aa15.4■□□□□ 0.06
Ebf3-203ENSMUST00000168203 Chrna2Q91X60 512 aa15.4■□□□□ 0.06
Ebf3-203ENSMUST00000168203 Becn1O88597 448 aa15.39■□□□□ 0.05
Ebf3-203ENSMUST00000168203 Atp2b2Q9R0K7 1198 aa15.39■□□□□ 0.05
Ebf3-203ENSMUST00000168203 DnmbpQ6TXD4 1580 aa15.39■□□□□ 0.05
Ebf3-203ENSMUST00000168203 Knl1Q66JQ7 1612 aa15.39■□□□□ 0.05
Ebf3-203ENSMUST00000168203 Cdk5rap2Q8K389 1822 aa15.39■□□□□ 0.05
Ebf3-203ENSMUST00000168203 Usp19Q3UJD6 1360 aa15.39■□□□□ 0.05
Ebf3-203ENSMUST00000168203 Hfm1D3Z4R1 1434 aa15.38■□□□□ 0.05
Ebf3-203ENSMUST00000168203 Chmp4cQ9D7F7 232 aa15.38■□□□□ 0.05
Ebf3-203ENSMUST00000168203 KnstrnQ9D9Z1 312 aaKnown RBP15.38■□□□□ 0.05
Ebf3-203ENSMUST00000168203 Mcm4P49717 862 aa15.38■□□□□ 0.05
Ebf3-203ENSMUST00000168203 Rnf214Q8BFU3 668 aaKnown RBP15.38■□□□□ 0.05
Ebf3-203ENSMUST00000168203 Ino80Q6ZPV2 1559 aa15.38■□□□□ 0.05
Ebf3-203ENSMUST00000168203 Plxnc1Q9QZC2 1574 aa15.38■□□□□ 0.05
Ebf3-203ENSMUST00000168203 Pcmtd1P59913 357 aa15.38■□□□□ 0.05
Ebf3-203ENSMUST00000168203 IbtkQ6ZPR6 1352 aaKnown RBP15.37■□□□□ 0.05
Ebf3-203ENSMUST00000168203 Rsph3aQ3UFY4 516 aa15.37■□□□□ 0.05
Ebf3-203ENSMUST00000168203 Kiaa1107Q80TK0 1369 aa15.37■□□□□ 0.05
Ebf3-203ENSMUST00000168203 Cfap65Q3V0B4 1847 aa15.37■□□□□ 0.05
Ebf3-203ENSMUST00000168203 Ppp1r9bQ6R891 817 aaKnown RBP15.37■□□□□ 0.05
Ebf3-203ENSMUST00000168203 Sptbn5F6UCX4 1208 aa15.36■□□□□ 0.05
Ebf3-203ENSMUST00000168203 Eif2ak4Q9QZ05 1648 aa15.36■□□□□ 0.05
Ebf3-203ENSMUST00000168203 Mroh1E0CZ22 1640 aa15.36■□□□□ 0.05
Ebf3-203ENSMUST00000168203 Trpm1Q2TV84 1622 aa15.36■□□□□ 0.05
Ebf3-203ENSMUST00000168203 FanciQ8K368 1330 aa15.36■□□□□ 0.05
Ebf3-203ENSMUST00000168203 1700019A02RikA0A087WPV9 146 aa15.35■□□□□ 0.05
Ebf3-203ENSMUST00000168203 Casc1Q6TDU8 730 aa15.35■□□□□ 0.05
Ebf3-203ENSMUST00000168203 NgefQ8CHT1 710 aa15.35■□□□□ 0.05
Ebf3-203ENSMUST00000168203 Scaf11E9PZM7 1456 aaKnown RBP15.35■□□□□ 0.05
Ebf3-203ENSMUST00000168203 KdrP35918 1367 aa15.35■□□□□ 0.05
Ebf3-203ENSMUST00000168203 Kiaa0556Q8C753 1610 aa15.34■□□□□ 0.05
Ebf3-203ENSMUST00000168203 Cdk19Q8BWD8 501 aa15.34■□□□□ 0.05
Ebf3-203ENSMUST00000168203 Ccdc146E9Q9F7 977 aa15.34■□□□□ 0.05
Ebf3-203ENSMUST00000168203 Apaf1O88879 1249 aa15.34■□□□□ 0.05
Ebf3-203ENSMUST00000168203 Fam13bQ8K2H3 851 aa15.34■□□□□ 0.05
Ebf3-203ENSMUST00000168203 Trim58Q5NCC9 485 aa15.33■□□□□ 0.05
Ebf3-203ENSMUST00000168203 Smc5Q8CG46 1101 aaKnown RBP15.33■□□□□ 0.05
Ebf3-203ENSMUST00000168203 Psme1P97371 249 aa15.33■□□□□ 0.04
Ebf3-203ENSMUST00000168203 Ccar1Q8CH18 1146 aaKnown RBP15.33■□□□□ 0.04
Ebf3-203ENSMUST00000168203 MaddQ80U28 1577 aa15.33■□□□□ 0.04
Ebf3-203ENSMUST00000168203 Vgll3P85442 326 aa15.33■□□□□ 0.04
Ebf3-203ENSMUST00000168203 Txndc2Q6P902 515 aa15.32■□□□□ 0.04
Ebf3-203ENSMUST00000168203 Adamts7Q68SA9 1657 aa15.32■□□□□ 0.04
Ebf3-203ENSMUST00000168203 Il4rP16382 810 aa15.32■□□□□ 0.04
Ebf3-203ENSMUST00000168203 Dusp27Q148W8 1138 aa15.32■□□□□ 0.04
Ebf3-203ENSMUST00000168203 PogkQ80TC5 607 aa15.32■□□□□ 0.04
Ebf3-203ENSMUST00000168203 Nectin2P32507 530 aa15.32■□□□□ 0.04
Ebf3-203ENSMUST00000168203 Kiaa0754Q69ZZ9 979 aa15.32■□□□□ 0.04
Ebf3-203ENSMUST00000168203 Q4VA45 678 aa15.31■□□□□ 0.04
Ebf3-203ENSMUST00000168203 AdgbG3UZ78 1657 aa15.31■□□□□ 0.04
Ebf3-203ENSMUST00000168203 Zranb1Q7M760 708 aa15.31■□□□□ 0.04
Ebf3-203ENSMUST00000168203 Ciz1Q8VEH2 845 aa15.31■□□□□ 0.04
Ebf3-203ENSMUST00000168203 Ttc37F8VPK0 1563 aa15.3■□□□□ 0.04
Ebf3-203ENSMUST00000168203 Tpm2P58774 284 aa15.3■□□□□ 0.04
Ebf3-203ENSMUST00000168203 Nutm1Q8BHP2 1126 aa15.3■□□□□ 0.04
Ebf3-203ENSMUST00000168203 Ppp2r3aB2RXC8 1150 aa15.3■□□□□ 0.04
Ebf3-203ENSMUST00000168203 Plin1Q8CGN5 517 aa15.3■□□□□ 0.04
Ebf3-203ENSMUST00000168203 Arhgap23Q69ZH9 1483 aa15.3■□□□□ 0.04
Ebf3-203ENSMUST00000168203 Ahdc1Q6PAL7 1594 aaKnown RBP15.3■□□□□ 0.04
Ebf3-203ENSMUST00000168203 Atxn3Q9CVD2 355 aa15.29■□□□□ 0.04
Ebf3-203ENSMUST00000168203 Kif20aP97329 887 aa15.29■□□□□ 0.04
Ebf3-203ENSMUST00000168203 Safb2Q80YR5 991 aaKnown RBP15.29■□□□□ 0.04
Ebf3-203ENSMUST00000168203 Irx6Q9ER75 438 aa15.28■□□□□ 0.04
Ebf3-203ENSMUST00000168203 Zfp91Q62511 572 aa15.28■□□□□ 0.04
Ebf3-203ENSMUST00000168203 NpatQ8BMA5 1420 aa15.28■□□□□ 0.04
Ebf3-203ENSMUST00000168203 Kcnn1Q9EQR3 537 aa15.27■□□□□ 0.04
Ebf3-203ENSMUST00000168203 Kdm2bQ6P1G2 1309 aa15.27■□□□□ 0.03
Ebf3-203ENSMUST00000168203 Birc3O08863 600 aa15.27■□□□□ 0.03
Ebf3-203ENSMUST00000168203 P2rx7Q9Z1M0 595 aa15.26■□□□□ 0.03
Ebf3-203ENSMUST00000168203 Plppr3Q7TPB0 716 aa15.26■□□□□ 0.03
Ebf3-203ENSMUST00000168203 NinlQ6ZQ12 1394 aa15.25■□□□□ 0.03
Ebf3-203ENSMUST00000168203 Cavin4A2AMM0 362 aa15.25■□□□□ 0.03
Ebf3-203ENSMUST00000168203 Sipa1l1Q8C0T5 1782 aa15.25■□□□□ 0.03
Ebf3-203ENSMUST00000168203 Hecw2Q6I6G8 1578 aa15.25■□□□□ 0.03
Ebf3-203ENSMUST00000168203 Gas2l2Q5SSG4 860 aa15.25■□□□□ 0.03
Ebf3-203ENSMUST00000168203 Myom1Q62234 1667 aaKnown RBP15.24■□□□□ 0.03
Ebf3-203ENSMUST00000168203 Nol12Q8BG17 217 aa15.24■□□□□ 0.03
Ebf3-203ENSMUST00000168203 Naip7Q9JIB3 1402 aa15.24■□□□□ 0.03
Ebf3-203ENSMUST00000168203 Ncbp3Q8BZR9 615 aaKnown RBP15.24■□□□□ 0.03
Ebf3-203ENSMUST00000168203 Catsper2A2ARP9 588 aa15.23■□□□□ 0.03
Retrieved 100 of 22,080 RNA–protein pairs in 79 ms