RNA–Protein interactions for RNA: ENSMUST00000159337.7

Vcan-205, Transcript of Versican core protein, mousemouse

TSL 1 (best) BASIC

Gene Vcan, Length 2,273 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-205ENSMUST00000159337 Prex1Q69ZK0 1650 aa18.44■□□□□ 0.54
Vcan-205ENSMUST00000159337 PalldQ9ET54 1408 aa18.43■□□□□ 0.54
Vcan-205ENSMUST00000159337 Gm10093D3YYI8 482 aa18.43■□□□□ 0.54
Vcan-205ENSMUST00000159337 Hdac1O09106 482 aaKnown RBP18.43■□□□□ 0.54
Vcan-205ENSMUST00000159337 U2af1Q9D883 239 aaKnown RBP18.43■□□□□ 0.54
Vcan-205ENSMUST00000159337 Chd1P40201 1711 aa18.43■□□□□ 0.54
Vcan-205ENSMUST00000159337 Cdc42bpgQ80UW5 1551 aa18.43■□□□□ 0.54
Vcan-205ENSMUST00000159337 Tsen2Q6P7W5 460 aa18.43■□□□□ 0.54
Vcan-205ENSMUST00000159337 DmtnQ9WV69 405 aa18.43■□□□□ 0.54
Vcan-205ENSMUST00000159337 Prdm2A2A7B5 1709 aaKnown RBP18.43■□□□□ 0.54
Vcan-205ENSMUST00000159337 Nrxn1Q9CS84 1514 aa18.41■□□□□ 0.54
Vcan-205ENSMUST00000159337 Plcb2A3KGF7 1181 aa18.41■□□□□ 0.54
Vcan-205ENSMUST00000159337 Dusp27Q148W8 1138 aa18.41■□□□□ 0.54
Vcan-205ENSMUST00000159337 Dnajc5bQ9CQ94 199 aa18.41■□□□□ 0.54
Vcan-205ENSMUST00000159337 Znf692Q3U381 531 aa18.4■□□□□ 0.54
Vcan-205ENSMUST00000159337 SkilQ60665 675 aa18.4■□□□□ 0.54
Vcan-205ENSMUST00000159337 Nsfl1cQ9CZ44 370 aaKnown RBP18.4■□□□□ 0.54
Vcan-205ENSMUST00000159337 CastP51125 788 aa18.4■□□□□ 0.54
Vcan-205ENSMUST00000159337 Rsph3aQ3UFY4 516 aa18.4■□□□□ 0.54
Vcan-205ENSMUST00000159337 Ttc21aQ8C0S4 1314 aa18.4■□□□□ 0.54
Vcan-205ENSMUST00000159337 Brd1E9PZ26 1189 aaKnown RBP18.39■□□□□ 0.54
Vcan-205ENSMUST00000159337 Cog6Q8R3I3 657 aa18.39■□□□□ 0.54
Vcan-205ENSMUST00000159337 Znf541Q0GGX2 1363 aa18.39■□□□□ 0.53
Vcan-205ENSMUST00000159337 Topbp1Q6ZQF0 1515 aa18.39■□□□□ 0.53
Vcan-205ENSMUST00000159337 FanciQ8K368 1330 aa18.39■□□□□ 0.53
Vcan-205ENSMUST00000159337 Uhrf1bp1B2KF50 1429 aa18.39■□□□□ 0.53
Vcan-205ENSMUST00000159337 Rrp12Q6P5B0 1295 aaKnown RBP18.39■□□□□ 0.53
Vcan-205ENSMUST00000159337 Maco1Q7TQE6 664 aaKnown RBP18.39■□□□□ 0.53
Vcan-205ENSMUST00000159337 KnstrnQ9D9Z1 312 aaKnown RBP18.38■□□□□ 0.53
Vcan-205ENSMUST00000159337 Ankrd50F7BE84 1390 aa18.38■□□□□ 0.53
Vcan-205ENSMUST00000159337 Lrrc7Q80TE7 1490 aa18.38■□□□□ 0.53
Vcan-205ENSMUST00000159337 Ciz1Q8VEH2 845 aa18.37■□□□□ 0.53
Vcan-205ENSMUST00000159337 Tecpr2Q3UH45 1423 aa18.36■□□□□ 0.53
Vcan-205ENSMUST00000159337 Depdc5P61460 1591 aa18.36■□□□□ 0.53
Vcan-205ENSMUST00000159337 Stag3O70576 1240 aa18.35■□□□□ 0.53
Vcan-205ENSMUST00000159337 Ccdc171E9Q1U1 1324 aa18.35■□□□□ 0.53
Vcan-205ENSMUST00000159337 Akap12Q9WTQ5 1684 aa18.35■□□□□ 0.53
Vcan-205ENSMUST00000159337 Rtn4Q99P72 1162 aaKnown RBP18.34■□□□□ 0.53
Vcan-205ENSMUST00000159337 Naip7Q9JIB3 1402 aa18.34■□□□□ 0.53
Vcan-205ENSMUST00000159337 PaskQ8CEE6 1383 aa18.34■□□□□ 0.53
Vcan-205ENSMUST00000159337 PogkQ80TC5 607 aa18.34■□□□□ 0.53
Vcan-205ENSMUST00000159337 Rfx1P48377 963 aa18.33■□□□□ 0.53
Vcan-205ENSMUST00000159337 Kdm4cQ8VCD7 1054 aa18.33■□□□□ 0.53
Vcan-205ENSMUST00000159337 Wwc1Q5SXA9 1104 aa18.33■□□□□ 0.52
Vcan-205ENSMUST00000159337 Trim44Q9QXA7 346 aa18.33■□□□□ 0.52
Vcan-205ENSMUST00000159337 CenpjQ569L8 1344 aa18.33■□□□□ 0.52
Vcan-205ENSMUST00000159337 Usp32F8VPZ3 1604 aa18.32■□□□□ 0.52
Vcan-205ENSMUST00000159337 Ccdc60Q8C4J0 545 aa18.32■□□□□ 0.52
Vcan-205ENSMUST00000159337 Cavin4A2AMM0 362 aa18.32■□□□□ 0.52
Vcan-205ENSMUST00000159337 SlkO54988 1233 aa18.32■□□□□ 0.52
Vcan-205ENSMUST00000159337 Ddrgk1Q80WW9 315 aa18.32■□□□□ 0.52
Vcan-205ENSMUST00000159337 Pik3r4Q8VD65 1358 aa18.31■□□□□ 0.52
Vcan-205ENSMUST00000159337 AU022751B1B0V2 589 aa18.3■□□□□ 0.52
Vcan-205ENSMUST00000159337 Cetn4Q8K4K1 168 aa18.29■□□□□ 0.52
Vcan-205ENSMUST00000159337 Znf330Q922H9 316 aa18.29■□□□□ 0.52
Vcan-205ENSMUST00000159337 Clcn1Q64347 994 aa18.29■□□□□ 0.52
Vcan-205ENSMUST00000159337 Wdr63B2RY71 923 aa18.28■□□□□ 0.52
Vcan-205ENSMUST00000159337 G3bp1P97855 465 aaKnown RBP18.28■□□□□ 0.52
Vcan-205ENSMUST00000159337 Atp7bQ64446 1462 aa18.28■□□□□ 0.52
Vcan-205ENSMUST00000159337 LifrP42703 1092 aa18.28■□□□□ 0.52
Vcan-205ENSMUST00000159337 IqubQ8CDK3 788 aa18.28■□□□□ 0.52
Vcan-205ENSMUST00000159337 Igf1rQ60751 1373 aa18.27■□□□□ 0.52
Vcan-205ENSMUST00000159337 Tpm2P58774 284 aa18.26■□□□□ 0.51
Vcan-205ENSMUST00000159337 Tbc1d9Q3UYK3 1264 aa18.26■□□□□ 0.51
Vcan-205ENSMUST00000159337 Slc52a2Q9D8F3 450 aa18.25■□□□□ 0.51
Vcan-205ENSMUST00000159337 Tex2Q6ZPJ0 1128 aaKnown RBP18.25■□□□□ 0.51
Vcan-205ENSMUST00000159337 Tfip11Q9ERA6 838 aaKnown RBP18.25■□□□□ 0.51
Vcan-205ENSMUST00000159337 Nsd3Q6P2L6 1439 aa18.24■□□□□ 0.51
Vcan-205ENSMUST00000159337 Aplp1Q03157 653 aa18.24■□□□□ 0.51
Vcan-205ENSMUST00000159337 DekQ7TNV0 380 aaKnown RBP18.24■□□□□ 0.51
Vcan-205ENSMUST00000159337 Lemd3Q9WU40 921 aa18.24■□□□□ 0.51
Vcan-205ENSMUST00000159337 Tmx3Q8BXZ1 456 aa18.24■□□□□ 0.51
Vcan-205ENSMUST00000159337 Aldh1l1Q8R0Y6 902 aa18.24■□□□□ 0.51
Vcan-205ENSMUST00000159337 MvpQ9EQK5 861 aa18.24■□□□□ 0.51
Vcan-205ENSMUST00000159337 Mroh1E0CZ22 1640 aa18.23■□□□□ 0.51
Vcan-205ENSMUST00000159337 Dhx16G3X8X0 1044 aaKnown RBP18.23■□□□□ 0.51
Vcan-205ENSMUST00000159337 Nutm1Q8BHP2 1126 aa18.23■□□□□ 0.51
Vcan-205ENSMUST00000159337 Q3UPC7 1272 aa18.22■□□□□ 0.51
Vcan-205ENSMUST00000159337 1700010I14RikQ7TPG0 532 aa18.21■□□□□ 0.51
Vcan-205ENSMUST00000159337 ScaperF8VQ70 1398 aaKnown RBP18.21■□□□□ 0.51
Vcan-205ENSMUST00000159337 Bag4Q8CI61 457 aa18.21■□□□□ 0.51
Vcan-205ENSMUST00000159337 Exosc9Q9JHI7 438 aaKnown RBP18.21■□□□□ 0.51
Vcan-205ENSMUST00000159337 Casq1O09165 405 aa18.2■□□□□ 0.5
Vcan-205ENSMUST00000159337 Chmp4bQ9D8B3 224 aaKnown RBP18.2■□□□□ 0.5
Vcan-205ENSMUST00000159337 CltcQ68FD5 1675 aaKnown RBP18.2■□□□□ 0.5
Vcan-205ENSMUST00000159337 Ankrd44B2RXR6 993 aa18.2■□□□□ 0.5
Vcan-205ENSMUST00000159337 Plekhm2Q80TQ5 1018 aa18.2■□□□□ 0.5
Vcan-205ENSMUST00000159337 Bloc1s4Q8VED2 215 aa18.2■□□□□ 0.5
Vcan-205ENSMUST00000159337 Dmrtc1Q9D9R7 182 aa18.2■□□□□ 0.5
Vcan-205ENSMUST00000159337 Swt1Q9DBQ9 907 aa18.19■□□□□ 0.5
Vcan-205ENSMUST00000159337 Nek4Q9Z1J2 792 aa18.19■□□□□ 0.5
Vcan-205ENSMUST00000159337 Gli2Q0VGT2 1544 aa18.19■□□□□ 0.5
Vcan-205ENSMUST00000159337 Q4VA45 678 aa18.19■□□□□ 0.5
Vcan-205ENSMUST00000159337 GorabQ8BRM2 368 aa18.19■□□□□ 0.5
Vcan-205ENSMUST00000159337 EngaseQ8BX80 734 aa18.19■□□□□ 0.5
Vcan-205ENSMUST00000159337 NgefQ8CHT1 710 aa18.19■□□□□ 0.5
Vcan-205ENSMUST00000159337 Rangap1P46061 589 aaKnown RBP18.18■□□□□ 0.5
Vcan-205ENSMUST00000159337 Fchsd2Q3USJ8 740 aa18.18■□□□□ 0.5
Vcan-205ENSMUST00000159337 Taok2Q6ZQ29 1240 aa18.18■□□□□ 0.5
Vcan-205ENSMUST00000159337 CarsQ9ER72 831 aaKnown RBP18.18■□□□□ 0.5
Retrieved 100 of 22,080 RNA–protein pairs in 12.1 ms