RNA–Protein interactions for RNA: ENSMUST00000111438.1

Ddx55-202, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

TSL 2 BASIC

Gene Ddx55, Length 2,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-202ENSMUST00000111438 Rab3gap2Q8BMG7 1366 aa16.53■□□□□ 0.24
Ddx55-202ENSMUST00000111438 Wwc2Q6NXJ0 1187 aa16.53■□□□□ 0.24
Ddx55-202ENSMUST00000111438 Scn7aB1AYL1 1681 aa16.53■□□□□ 0.24
Ddx55-202ENSMUST00000111438 IbtkQ6ZPR6 1352 aaKnown RBP16.52■□□□□ 0.24
Ddx55-202ENSMUST00000111438 Astn2Q80Z10 1352 aa16.52■□□□□ 0.24
Ddx55-202ENSMUST00000111438 Ppp2r1aQ76MZ3 589 aa16.52■□□□□ 0.24
Ddx55-202ENSMUST00000111438 Prdm10Q3UTQ7 1184 aa16.52■□□□□ 0.23
Ddx55-202ENSMUST00000111438 Wdr17E9Q271 1322 aa16.51■□□□□ 0.23
Ddx55-202ENSMUST00000111438 Farp2Q91VS8 1065 aa16.5■□□□□ 0.23
Ddx55-202ENSMUST00000111438 Map2P20357 1828 aa16.49■□□□□ 0.23
Ddx55-202ENSMUST00000111438 PnisrA2AJT4 805 aaKnown RBP16.49■□□□□ 0.23
Ddx55-202ENSMUST00000111438 Anp32bQ9EST5 272 aaKnown RBP16.49■□□□□ 0.23
Ddx55-202ENSMUST00000111438 CemipQ8BI06 1361 aa16.49■□□□□ 0.23
Ddx55-202ENSMUST00000111438 Cdk12Q14AX6 1484 aaKnown RBP16.49■□□□□ 0.23
Ddx55-202ENSMUST00000111438 Frmpd2A0A140LI67 1392 aa16.48■□□□□ 0.23
Ddx55-202ENSMUST00000111438 Slc35g1Q8BY79 368 aa16.48■□□□□ 0.23
Ddx55-202ENSMUST00000111438 Cald1E9QA15 768 aaKnown RBP16.47■□□□□ 0.23
Ddx55-202ENSMUST00000111438 Rpgrip1lQ8CG73 1264 aa16.47■□□□□ 0.23
Ddx55-202ENSMUST00000111438 Mrs2Q5NCE8 434 aa16.45■□□□□ 0.22
Ddx55-202ENSMUST00000111438 Abca15E9PWH4 1668 aa16.45■□□□□ 0.22
Ddx55-202ENSMUST00000111438 Siglec1Q62230 1695 aa16.45■□□□□ 0.22
Ddx55-202ENSMUST00000111438 GnpatP98192 678 aa16.45■□□□□ 0.22
Ddx55-202ENSMUST00000111438 Tet3Q8BG87 1668 aa16.44■□□□□ 0.22
Ddx55-202ENSMUST00000111438 Marf1Q8BJ34 1730 aaKnown RBP16.44■□□□□ 0.22
Ddx55-202ENSMUST00000111438 Hoxb7P09024 217 aa16.44■□□□□ 0.22
Ddx55-202ENSMUST00000111438 Q7TT23 1179 aa16.43■□□□□ 0.22
Ddx55-202ENSMUST00000111438 Robo1O89026 1612 aa16.42■□□□□ 0.22
Ddx55-202ENSMUST00000111438 Atf7ipQ7TT18 1306 aa16.42■□□□□ 0.22
Ddx55-202ENSMUST00000111438 Fyb1O35601 819 aa16.41■□□□□ 0.22
Ddx55-202ENSMUST00000111438 Slc4a2P13808 1237 aaKnown RBP16.41■□□□□ 0.22
Ddx55-202ENSMUST00000111438 TimelessQ9R1X4 1197 aa16.41■□□□□ 0.22
Ddx55-202ENSMUST00000111438 Kif24Q6NWW5 1356 aa16.4■□□□□ 0.22
Ddx55-202ENSMUST00000111438 Ddx17Q501J6 650 aaKnown RBP16.4■□□□□ 0.22
Ddx55-202ENSMUST00000111438 Scaf1Q5U4C3 1256 aaKnown RBP16.4■□□□□ 0.22
Ddx55-202ENSMUST00000111438 PtprvP70289 1705 aa16.4■□□□□ 0.22
Ddx55-202ENSMUST00000111438 Atp7bQ64446 1462 aa16.4■□□□□ 0.22
Ddx55-202ENSMUST00000111438 Ncapd2Q8K2Z4 1392 aa16.4■□□□□ 0.22
Ddx55-202ENSMUST00000111438 Ncoa4Q5U4H9 625 aa16.4■□□□□ 0.22
Ddx55-202ENSMUST00000111438 Nlgn1Q99K10 843 aa16.4■□□□□ 0.22
Ddx55-202ENSMUST00000111438 P2rx7Q9Z1M0 595 aa16.4■□□□□ 0.22
Ddx55-202ENSMUST00000111438 Dennd6aQ8BH65 605 aa16.39■□□□□ 0.22
Ddx55-202ENSMUST00000111438 Nfat5Q9WV30 1534 aa16.39■□□□□ 0.21
Ddx55-202ENSMUST00000111438 Zfp142G5E869 1843 aa16.38■□□□□ 0.21
Ddx55-202ENSMUST00000111438 Gimap6Q8K349 305 aa16.38■□□□□ 0.21
Ddx55-202ENSMUST00000111438 Trim28Q62318 834 aa16.38■□□□□ 0.21
Ddx55-202ENSMUST00000111438 Fam135bQ9DAI6 1403 aa16.37■□□□□ 0.21
Ddx55-202ENSMUST00000111438 Atp10bB1AWN4 1474 aa16.37■□□□□ 0.21
Ddx55-202ENSMUST00000111438 Bcl9lQ67FY2 1494 aa16.37■□□□□ 0.21
Ddx55-202ENSMUST00000111438 Ttll13A4Q9F6 804 aa16.36■□□□□ 0.21
Ddx55-202ENSMUST00000111438 Hspa1lP16627 641 aa16.36■□□□□ 0.21
Ddx55-202ENSMUST00000111438 Zmym3Q9JLM4 1370 aa16.36■□□□□ 0.21
Ddx55-202ENSMUST00000111438 Birc3O08863 600 aa16.36■□□□□ 0.21
Ddx55-202ENSMUST00000111438 Zscan21Q07231 555 aa16.36■□□□□ 0.21
Ddx55-202ENSMUST00000111438 Gimap5Q8BWF2 308 aa16.36■□□□□ 0.21
Ddx55-202ENSMUST00000111438 FancaQ9JL70 1439 aa16.36■□□□□ 0.21
Ddx55-202ENSMUST00000111438 Ano8Q6PB70 1060 aa16.35■□□□□ 0.21
Ddx55-202ENSMUST00000111438 Kiaa1107Q80TK0 1369 aa16.35■□□□□ 0.21
Ddx55-202ENSMUST00000111438 Gm21190A0A0G2JGJ6 266 aa16.35■□□□□ 0.21
Ddx55-202ENSMUST00000111438 Nlrp6Q91WS2 869 aa16.35■□□□□ 0.21
Ddx55-202ENSMUST00000111438 Nckap5lQ6GQX2 1323 aa16.33■□□□□ 0.21
Ddx55-202ENSMUST00000111438 Bcl11bQ99PV8 884 aa16.33■□□□□ 0.21
Ddx55-202ENSMUST00000111438 Dixdc1Q80Y83 711 aa16.32■□□□□ 0.2
Ddx55-202ENSMUST00000111438 NrdcQ8BHG1 1161 aa16.32■□□□□ 0.2
Ddx55-202ENSMUST00000111438 Uhrf1bp1lA2RSJ4 1457 aa16.31■□□□□ 0.2
Ddx55-202ENSMUST00000111438 Ppp1r15aP17564 657 aa16.31■□□□□ 0.2
Ddx55-202ENSMUST00000111438 Spef2Q8C9J3 1734 aa16.31■□□□□ 0.2
Ddx55-202ENSMUST00000111438 PaskQ8CEE6 1383 aa16.31■□□□□ 0.2
Ddx55-202ENSMUST00000111438 Rad17Q6NXW6 688 aa16.31■□□□□ 0.2
Ddx55-202ENSMUST00000111438 Cabp4Q8VHC5 271 aa16.31■□□□□ 0.2
Ddx55-202ENSMUST00000111438 Dzip1Q8BMD2 852 aa16.3■□□□□ 0.2
Ddx55-202ENSMUST00000111438 Cadps2Q8BYR5 1297 aa16.3■□□□□ 0.2
Ddx55-202ENSMUST00000111438 Ptpn23Q6PB44 1692 aa16.29■□□□□ 0.2
Ddx55-202ENSMUST00000111438 Kcnh5Q920E3 988 aa16.29■□□□□ 0.2
Ddx55-202ENSMUST00000111438 Parp14Q2EMV9 1817 aa16.29■□□□□ 0.2
Ddx55-202ENSMUST00000111438 GsdmaQ9EST1 446 aa16.29■□□□□ 0.2
Ddx55-202ENSMUST00000111438 Tnnt3Q9QZ47 272 aa16.29■□□□□ 0.2
Ddx55-202ENSMUST00000111438 Nid2O88322 1403 aa16.28■□□□□ 0.2
Ddx55-202ENSMUST00000111438 Tom1O88746 492 aa16.27■□□□□ 0.2
Ddx55-202ENSMUST00000111438 TnrQ8BYI9 1358 aa16.27■□□□□ 0.19
Ddx55-202ENSMUST00000111438 Slc12a5Q91V14 1138 aa16.26■□□□□ 0.19
Ddx55-202ENSMUST00000111438 Rsph6aQ8CDR2 708 aa16.25■□□□□ 0.19
Ddx55-202ENSMUST00000111438 Ybx3Q9JKB3 361 aaKnown RBP16.25■□□□□ 0.19
Ddx55-202ENSMUST00000111438 Hoxc9P09633 260 aa16.24■□□□□ 0.19
Ddx55-202ENSMUST00000111438 Tsen2Q6P7W5 460 aa16.24■□□□□ 0.19
Ddx55-202ENSMUST00000111438 Znf526Q8BI66 675 aa16.23■□□□□ 0.19
Ddx55-202ENSMUST00000111438 Eif4a2P10630 407 aa16.23■□□□□ 0.19
Ddx55-202ENSMUST00000111438 Stra8P70278 393 aa16.23■□□□□ 0.19
Ddx55-202ENSMUST00000111438 TatQ8QZR1 454 aa16.23■□□□□ 0.19
Ddx55-202ENSMUST00000111438 Dnajc10Q9DC23 793 aa16.23■□□□□ 0.19
Ddx55-202ENSMUST00000111438 Fmnl2A2APV2 1086 aa16.22■□□□□ 0.19
Ddx55-202ENSMUST00000111438 Esx1O88933 382 aa16.22■□□□□ 0.19
Ddx55-202ENSMUST00000111438 FocadA2AKG8 1798 aa16.22■□□□□ 0.19
Ddx55-202ENSMUST00000111438 Znf541Q0GGX2 1363 aa16.22■□□□□ 0.19
Ddx55-202ENSMUST00000111438 Usp19Q3UJD6 1360 aa16.22■□□□□ 0.19
Ddx55-202ENSMUST00000111438 Amer1Q7TS75 1132 aa16.22■□□□□ 0.19
Ddx55-202ENSMUST00000111438 Anp32aO35381 247 aa16.21■□□□□ 0.19
Ddx55-202ENSMUST00000111438 Map4k4P97820 1233 aaKnown RBP16.21■□□□□ 0.19
Ddx55-202ENSMUST00000111438 Mak16Q8BGS0 296 aaKnown RBP16.2■□□□□ 0.18
Ddx55-202ENSMUST00000111438 U2af1Q9D883 239 aaKnown RBP16.2■□□□□ 0.18
Ddx55-202ENSMUST00000111438 Slit2Q9R1B9 1521 aa16.2■□□□□ 0.18
Retrieved 100 of 22,080 RNA–protein pairs in 38.4 ms