RNA–Protein interactions for RNA: ENSMUST00000111180.8

Trim50-202, Transcript of E3 ubiquitin-protein ligase TRIM50, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim50, Length 1,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50-202ENSMUST00000111180 Kif1aP33173 1695 aa16.97■□□□□ 0.31
Trim50-202ENSMUST00000111180 Wdr17E9Q271 1322 aa16.97■□□□□ 0.31
Trim50-202ENSMUST00000111180 Fyb1O35601 819 aa16.96■□□□□ 0.31
Trim50-202ENSMUST00000111180 Cdk19Q8BWD8 501 aa16.96■□□□□ 0.31
Trim50-202ENSMUST00000111180 PrxO55103 1391 aa16.95■□□□□ 0.3
Trim50-202ENSMUST00000111180 Tmf1B9EKI3 1091 aa16.95■□□□□ 0.3
Trim50-202ENSMUST00000111180 Dixdc1Q80Y83 711 aa16.95■□□□□ 0.3
Trim50-202ENSMUST00000111180 Psrc1Q9D0P7 329 aa16.95■□□□□ 0.3
Trim50-202ENSMUST00000111180 Fam135bQ9DAI6 1403 aa16.92■□□□□ 0.3
Trim50-202ENSMUST00000111180 Camta1A2A891 1682 aa16.92■□□□□ 0.3
Trim50-202ENSMUST00000111180 Atp7bQ64446 1462 aa16.92■□□□□ 0.3
Trim50-202ENSMUST00000111180 Slc35g1Q8BY79 368 aa16.92■□□□□ 0.3
Trim50-202ENSMUST00000111180 Rgs17Q9QZB0 210 aa16.92■□□□□ 0.3
Trim50-202ENSMUST00000111180 Atp10bB1AWN4 1474 aa16.9■□□□□ 0.3
Trim50-202ENSMUST00000111180 NktrP30415 1453 aa16.9■□□□□ 0.3
Trim50-202ENSMUST00000111180 Slc4a1apE9PX68 744 aa16.9■□□□□ 0.3
Trim50-202ENSMUST00000111180 Fam184bQ0KK56 942 aa16.9■□□□□ 0.3
Trim50-202ENSMUST00000111180 Sf3b2Q3UJB0 878 aaKnown RBP16.9■□□□□ 0.3
Trim50-202ENSMUST00000111180 Pank3Q8R2W9 370 aa16.89■□□□□ 0.29
Trim50-202ENSMUST00000111180 PtpruB1AUH1 1446 aa16.88■□□□□ 0.29
Trim50-202ENSMUST00000111180 Sgsm1Q8BPQ7 1093 aa16.88■□□□□ 0.29
Trim50-202ENSMUST00000111180 FanciQ8K368 1330 aa16.87■□□□□ 0.29
Trim50-202ENSMUST00000111180 Ildr2B5TVM2 661 aa16.86■□□□□ 0.29
Trim50-202ENSMUST00000111180 HdgfP51859 237 aaKnown RBP16.86■□□□□ 0.29
Trim50-202ENSMUST00000111180 Zscan10Q3URR7 782 aa16.86■□□□□ 0.29
Trim50-202ENSMUST00000111180 Exosc9Q9JHI7 438 aaKnown RBP16.86■□□□□ 0.29
Trim50-202ENSMUST00000111180 Txnrd1Q9JMH6 613 aa16.86■□□□□ 0.29
Trim50-202ENSMUST00000111180 Gsto1O09131 240 aa16.86■□□□□ 0.29
Trim50-202ENSMUST00000111180 Rtl5Q5DTT4 599 aa16.86■□□□□ 0.29
Trim50-202ENSMUST00000111180 ZgpatQ8VDM1 511 aa16.86■□□□□ 0.29
Trim50-202ENSMUST00000111180 Cdhr2E9Q7P9 1308 aa16.85■□□□□ 0.29
Trim50-202ENSMUST00000111180 Col22a1E9Q7P1 1613 aa16.85■□□□□ 0.29
Trim50-202ENSMUST00000111180 Tnrc6bQ8BKI2 1810 aaKnown RBP16.84■□□□□ 0.29
Trim50-202ENSMUST00000111180 Inpp5dQ9ES52 1191 aa16.84■□□□□ 0.29
Trim50-202ENSMUST00000111180 TimelessQ9R1X4 1197 aa16.84■□□□□ 0.29
Trim50-202ENSMUST00000111180 Nrxn1Q9CS84 1514 aa16.83■□□□□ 0.29
Trim50-202ENSMUST00000111180 Abca15E9PWH4 1668 aa16.83■□□□□ 0.28
Trim50-202ENSMUST00000111180 Sugp2Q8CH09 1067 aa16.83■□□□□ 0.28
Trim50-202ENSMUST00000111180 Anp32bQ9EST5 272 aaKnown RBP16.83■□□□□ 0.28
Trim50-202ENSMUST00000111180 Dzip1Q8BMD2 852 aa16.81■□□□□ 0.28
Trim50-202ENSMUST00000111180 PaskQ8CEE6 1383 aa16.81■□□□□ 0.28
Trim50-202ENSMUST00000111180 Nop58Q6DFW4 536 aaKnown RBP16.8■□□□□ 0.28
Trim50-202ENSMUST00000111180 Idi2Q8BFZ6 227 aa16.8■□□□□ 0.28
Trim50-202ENSMUST00000111180 Kdm2bQ6P1G2 1309 aa16.79■□□□□ 0.28
Trim50-202ENSMUST00000111180 Ubap1lG3UW59 384 aa16.79■□□□□ 0.28
Trim50-202ENSMUST00000111180 Gprasp1Q5U4C1 1347 aa16.78■□□□□ 0.28
Trim50-202ENSMUST00000111180 Cnga1P29974 684 aa16.77■□□□□ 0.28
Trim50-202ENSMUST00000111180 Zmym3Q9JLM4 1370 aa16.77■□□□□ 0.27
Trim50-202ENSMUST00000111180 Tnrc6cQ3UHC0 1690 aaKnown RBP16.77■□□□□ 0.27
Trim50-202ENSMUST00000111180 Mon2Q80TL7 1715 aa16.77■□□□□ 0.27
Trim50-202ENSMUST00000111180 Gm21698A0A087WQP8 267 aa16.75■□□□□ 0.27
Trim50-202ENSMUST00000111180 Gm21671G3UY31 267 aa16.75■□□□□ 0.27
Trim50-202ENSMUST00000111180 Exoc6Q8R313 802 aa16.75■□□□□ 0.27
Trim50-202ENSMUST00000111180 CatipB9EKE5 520 aa16.74■□□□□ 0.27
Trim50-202ENSMUST00000111180 Stra8P70278 393 aa16.74■□□□□ 0.27
Trim50-202ENSMUST00000111180 Gimap6Q8K349 305 aa16.74■□□□□ 0.27
Trim50-202ENSMUST00000111180 Frmpd2A0A140LI67 1392 aa16.74■□□□□ 0.27
Trim50-202ENSMUST00000111180 Map3k19E9Q3S4 1311 aa16.73■□□□□ 0.27
Trim50-202ENSMUST00000111180 Ccdc129Q14B48 1034 aa16.73■□□□□ 0.27
Trim50-202ENSMUST00000111180 Col16a1Q8BLX7 1580 aa16.72■□□□□ 0.27
Trim50-202ENSMUST00000111180 Rab3gap2Q8BMG7 1366 aa16.72■□□□□ 0.27
Trim50-202ENSMUST00000111180 Ccdc6D3YZP9 469 aa16.72■□□□□ 0.27
Trim50-202ENSMUST00000111180 Mrs2Q5NCE8 434 aa16.71■□□□□ 0.27
Trim50-202ENSMUST00000111180 Kiaa0319Q5SZV5 1081 aa16.71■□□□□ 0.27
Trim50-202ENSMUST00000111180 Dcaf11Q91VU6 549 aa16.71■□□□□ 0.27
Trim50-202ENSMUST00000111180 Robo1O89026 1612 aa16.7■□□□□ 0.26
Trim50-202ENSMUST00000111180 Nfat5Q9WV30 1534 aa16.7■□□□□ 0.26
Trim50-202ENSMUST00000111180 Wwc2Q6NXJ0 1187 aa16.69■□□□□ 0.26
Trim50-202ENSMUST00000111180 Tnks1bp1P58871 1720 aa16.69■□□□□ 0.26
Trim50-202ENSMUST00000111180 PnisrA2AJT4 805 aaKnown RBP16.68■□□□□ 0.26
Trim50-202ENSMUST00000111180 Nid2O88322 1403 aa16.68■□□□□ 0.26
Trim50-202ENSMUST00000111180 Ltbp1Q8CG19 1712 aa16.68■□□□□ 0.26
Trim50-202ENSMUST00000111180 Shank2Q80Z38 1476 aa16.68■□□□□ 0.26
Trim50-202ENSMUST00000111180 NrdcQ8BHG1 1161 aa16.67■□□□□ 0.26
Trim50-202ENSMUST00000111180 Tet3Q8BG87 1668 aa16.67■□□□□ 0.26
Trim50-202ENSMUST00000111180 Gm21190A0A0G2JGJ6 266 aa16.67■□□□□ 0.26
Trim50-202ENSMUST00000111180 Zeb2Q9R0G7 1215 aa16.67■□□□□ 0.26
Trim50-202ENSMUST00000111180 Znf335A2A5K6 1337 aa16.66■□□□□ 0.26
Trim50-202ENSMUST00000111180 Ncoa4Q5U4H9 625 aa16.65■□□□□ 0.26
Trim50-202ENSMUST00000111180 Ppp2r1aQ76MZ3 589 aa16.65■□□□□ 0.26
Trim50-202ENSMUST00000111180 Pm20d1Q8C165 503 aa16.65■□□□□ 0.26
Trim50-202ENSMUST00000111180 IbtkQ6ZPR6 1352 aaKnown RBP16.64■□□□□ 0.25
Trim50-202ENSMUST00000111180 Pard3Q99NH2 1333 aa16.64■□□□□ 0.25
Trim50-202ENSMUST00000111180 Ncapd2Q8K2Z4 1392 aa16.63■□□□□ 0.25
Trim50-202ENSMUST00000111180 Dennd6aQ8BH65 605 aa16.63■□□□□ 0.25
Trim50-202ENSMUST00000111180 OscarQ8VBT3 265 aa16.63■□□□□ 0.25
Trim50-202ENSMUST00000111180 Kif16bB1AVY7 1312 aa16.63■□□□□ 0.25
Trim50-202ENSMUST00000111180 Bcl9lQ67FY2 1494 aa16.63■□□□□ 0.25
Trim50-202ENSMUST00000111180 Mdc1Q5PSV9 1707 aa16.62■□□□□ 0.25
Trim50-202ENSMUST00000111180 Cacna1sQ02789 1880 aa16.62■□□□□ 0.25
Trim50-202ENSMUST00000111180 Taok3Q8BYC6 898 aa16.62■□□□□ 0.25
Trim50-202ENSMUST00000111180 Card10P58660 1021 aa16.61■□□□□ 0.25
Trim50-202ENSMUST00000111180 Rpgrip1lQ8CG73 1264 aa16.61■□□□□ 0.25
Trim50-202ENSMUST00000111180 Amotl2Q8K371 772 aa16.61■□□□□ 0.25
Trim50-202ENSMUST00000111180 Cabp4Q8VHC5 271 aa16.61■□□□□ 0.25
Trim50-202ENSMUST00000111180 Astn2Q80Z10 1352 aa16.6■□□□□ 0.25
Trim50-202ENSMUST00000111180 Slx1bQ8BX32 270 aa16.6■□□□□ 0.25
Trim50-202ENSMUST00000111180 Kcnh5Q920E3 988 aa16.6■□□□□ 0.25
Trim50-202ENSMUST00000111180 Atf7ipQ7TT18 1306 aa16.59■□□□□ 0.25
Trim50-202ENSMUST00000111180 Zscan21Q07231 555 aa16.59■□□□□ 0.25
Retrieved 100 of 22,080 RNA–protein pairs in 35.8 ms