RNA–Protein interactions for RNA: ENSMUST00000110301.1

Clcn3-204, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,099 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-204ENSMUST00000110301 KarsQ99MN1 595 aaKnown RBP16.69■□□□□ 0.26
Clcn3-204ENSMUST00000110301 Plcb2A3KGF7 1181 aa16.69■□□□□ 0.26
Clcn3-204ENSMUST00000110301 Kif14L0N7N1 1674 aaKnown RBP16.68■□□□□ 0.26
Clcn3-204ENSMUST00000110301 Cfdp1O88271 295 aaKnown RBP16.68■□□□□ 0.26
Clcn3-204ENSMUST00000110301 Zpr1Q62384 459 aa16.68■□□□□ 0.26
Clcn3-204ENSMUST00000110301 Acsbg1Q99PU5 721 aa16.68■□□□□ 0.26
Clcn3-204ENSMUST00000110301 Nphp4P59240 1425 aa16.68■□□□□ 0.26
Clcn3-204ENSMUST00000110301 NhsB1AV60 1647 aa16.68■□□□□ 0.26
Clcn3-204ENSMUST00000110301 Ccdc171E9Q1U1 1324 aa16.68■□□□□ 0.26
Clcn3-204ENSMUST00000110301 Dot1lQ6XZL8 1540 aa16.67■□□□□ 0.26
Clcn3-204ENSMUST00000110301 Kdm5cP41230 1554 aa16.67■□□□□ 0.26
Clcn3-204ENSMUST00000110301 Spryd3E9Q9B3 442 aa16.67■□□□□ 0.26
Clcn3-204ENSMUST00000110301 Brpf1B2RRD7 1212 aa16.67■□□□□ 0.26
Clcn3-204ENSMUST00000110301 Zfyve16Q80U44 1528 aa16.67■□□□□ 0.26
Clcn3-204ENSMUST00000110301 Ipo9Q91YE6 1041 aa16.66■□□□□ 0.26
Clcn3-204ENSMUST00000110301 Abcc3B2RX12 1523 aa16.66■□□□□ 0.26
Clcn3-204ENSMUST00000110301 Ak7Q9D2H2 614 aa16.66■□□□□ 0.26
Clcn3-204ENSMUST00000110301 Fam50bQ9WTJ8 334 aa16.65■□□□□ 0.26
Clcn3-204ENSMUST00000110301 Map3k19E9Q3S4 1311 aa16.65■□□□□ 0.26
Clcn3-204ENSMUST00000110301 Nol10Q5RJG1 687 aaKnown RBP16.65■□□□□ 0.26
Clcn3-204ENSMUST00000110301 Sbno1Q689Z5 1390 aa16.65■□□□□ 0.26
Clcn3-204ENSMUST00000110301 Fhod3Q76LL6 1578 aa16.64■□□□□ 0.25
Clcn3-204ENSMUST00000110301 Frmpd2A0A140LI67 1392 aa16.64■□□□□ 0.25
Clcn3-204ENSMUST00000110301 Aplp1Q03157 653 aa16.64■□□□□ 0.25
Clcn3-204ENSMUST00000110301 TkfcQ8VC30 578 aa16.64■□□□□ 0.25
Clcn3-204ENSMUST00000110301 Abca8bQ8K440 1620 aa16.63■□□□□ 0.25
Clcn3-204ENSMUST00000110301 Maco1Q7TQE6 664 aaKnown RBP16.63■□□□□ 0.25
Clcn3-204ENSMUST00000110301 Farp2Q91VS8 1065 aa16.63■□□□□ 0.25
Clcn3-204ENSMUST00000110301 Hsp90aa1P07901 733 aaKnown RBP16.63■□□□□ 0.25
Clcn3-204ENSMUST00000110301 Lamc1P02468 1607 aaKnown RBP16.63■□□□□ 0.25
Clcn3-204ENSMUST00000110301 Klhdc4Q921I2 584 aa16.62■□□□□ 0.25
Clcn3-204ENSMUST00000110301 Gas2l2Q5SSG4 860 aa16.62■□□□□ 0.25
Clcn3-204ENSMUST00000110301 Chd1P40201 1711 aa16.61■□□□□ 0.25
Clcn3-204ENSMUST00000110301 Zmym4A2A791 1549 aaKnown RBP16.61■□□□□ 0.25
Clcn3-204ENSMUST00000110301 Speer4bQ9D9F7 267 aa16.61■□□□□ 0.25
Clcn3-204ENSMUST00000110301 Cnnm1Q0GA42 951 aa16.61■□□□□ 0.25
Clcn3-204ENSMUST00000110301 Dnajc5gQ8C632 165 aa16.61■□□□□ 0.25
Clcn3-204ENSMUST00000110301 Gm32742A0A1B0GT42 1604 aa16.61■□□□□ 0.25
Clcn3-204ENSMUST00000110301 Mphosph10Q810V0 681 aaKnown RBP16.6■□□□□ 0.25
Clcn3-204ENSMUST00000110301 Kcnh5Q920E3 988 aa16.6■□□□□ 0.25
Clcn3-204ENSMUST00000110301 Gm21680A0A0G2JGR8 267 aa16.6■□□□□ 0.25
Clcn3-204ENSMUST00000110301 Idi1P58044 227 aa16.6■□□□□ 0.25
Clcn3-204ENSMUST00000110301 Htatsf1Q8BGC0 757 aa16.6■□□□□ 0.25
Clcn3-204ENSMUST00000110301 Eif2s2Q99L45 331 aaKnown RBP16.6■□□□□ 0.25
Clcn3-204ENSMUST00000110301 AppP12023 770 aa16.6■□□□□ 0.25
Clcn3-204ENSMUST00000110301 Plekhm2Q80TQ5 1018 aa16.6■□□□□ 0.25
Clcn3-204ENSMUST00000110301 Tulp4Q9JIL5 1547 aa16.6■□□□□ 0.25
Clcn3-204ENSMUST00000110301 Rassf8Q8CJ96 419 aa16.6■□□□□ 0.25
Clcn3-204ENSMUST00000110301 Cul7Q8VE73 1689 aa16.6■□□□□ 0.25
Clcn3-204ENSMUST00000110301 Sh3bp5Q9Z131 463 aa16.59■□□□□ 0.25
Clcn3-204ENSMUST00000110301 Atp10aO54827 1508 aa16.59■□□□□ 0.25
Clcn3-204ENSMUST00000110301 Gm16486A0A1D5RMD1 1434 aa16.59■□□□□ 0.25
Clcn3-204ENSMUST00000110301 Dixdc1Q80Y83 711 aa16.59■□□□□ 0.25
Clcn3-204ENSMUST00000110301 Eif4a2P10630 407 aa16.59■□□□□ 0.25
Clcn3-204ENSMUST00000110301 MecomP14404 1042 aa16.58■□□□□ 0.25
Clcn3-204ENSMUST00000110301 Atf7ipQ7TT18 1306 aa16.58■□□□□ 0.24
Clcn3-204ENSMUST00000110301 Clstn1Q9EPL2 979 aa16.58■□□□□ 0.24
Clcn3-204ENSMUST00000110301 Pes1Q9EQ61 584 aaKnown RBP16.58■□□□□ 0.24
Clcn3-204ENSMUST00000110301 MccE9PWI3 1003 aa16.58■□□□□ 0.24
Clcn3-204ENSMUST00000110301 Kank1E9Q238 1360 aa16.58■□□□□ 0.24
Clcn3-204ENSMUST00000110301 Rsph6aQ8CDR2 708 aa16.57■□□□□ 0.24
Clcn3-204ENSMUST00000110301 Atl3Q91YH5 541 aa16.57■□□□□ 0.24
Clcn3-204ENSMUST00000110301 Cgnl1Q6AW69 1298 aa16.57■□□□□ 0.24
Clcn3-204ENSMUST00000110301 Dzip1Q8BMD2 852 aa16.57■□□□□ 0.24
Clcn3-204ENSMUST00000110301 Uggt2E9Q4X2 1504 aa16.57■□□□□ 0.24
Clcn3-204ENSMUST00000110301 Amotl2Q8K371 772 aa16.57■□□□□ 0.24
Clcn3-204ENSMUST00000110301 Trpm2Q91YD4 1506 aa16.57■□□□□ 0.24
Clcn3-204ENSMUST00000110301 Pola1P33609 1465 aa16.57■□□□□ 0.24
Clcn3-204ENSMUST00000110301 Pcdh10E9PXQ7 1057 aa16.56■□□□□ 0.24
Clcn3-204ENSMUST00000110301 Myo3aQ8K3H5 1613 aa16.56■□□□□ 0.24
Clcn3-204ENSMUST00000110301 Gm21663A0A0G2JE01 267 aa16.56■□□□□ 0.24
Clcn3-204ENSMUST00000110301 Gm7361D3Z6R1 267 aa16.56■□□□□ 0.24
Clcn3-204ENSMUST00000110301 5031410I06RikE9Q4E0 267 aa16.56■□□□□ 0.24
Clcn3-204ENSMUST00000110301 Gm1979E9QAN3 267 aa16.56■□□□□ 0.24
Clcn3-204ENSMUST00000110301 Gm5862K7N5V5 267 aa16.56■□□□□ 0.24
Clcn3-204ENSMUST00000110301 Gm10220K7N660 267 aa16.56■□□□□ 0.24
Clcn3-204ENSMUST00000110301 CastP51125 788 aa16.56■□□□□ 0.24
Clcn3-204ENSMUST00000110301 Ak9G3UYQ4 1894 aa16.55■□□□□ 0.24
Clcn3-204ENSMUST00000110301 Map3k13Q1HKZ5 959 aa16.55■□□□□ 0.24
Clcn3-204ENSMUST00000110301 Btbd11Q6GQW0 1109 aa16.55■□□□□ 0.24
Clcn3-204ENSMUST00000110301 SkilQ60665 675 aa16.55■□□□□ 0.24
Clcn3-204ENSMUST00000110301 Q3UPC7 1272 aa16.55■□□□□ 0.24
Clcn3-204ENSMUST00000110301 Dnajc10Q9DC23 793 aa16.55■□□□□ 0.24
Clcn3-204ENSMUST00000110301 Ccdc155Q80VJ8 648 aa16.54■□□□□ 0.24
Clcn3-204ENSMUST00000110301 Ccdc183A2AJB1 534 aa16.54■□□□□ 0.24
Clcn3-204ENSMUST00000110301 PsapQ61207 557 aaKnown RBP16.54■□□□□ 0.24
Clcn3-204ENSMUST00000110301 Exoc6bA6H5Z3 810 aa16.53■□□□□ 0.24
Clcn3-204ENSMUST00000110301 Sf3b2Q3UJB0 878 aaKnown RBP16.53■□□□□ 0.24
Clcn3-204ENSMUST00000110301 Q9D2X8 372 aa16.53■□□□□ 0.24
Clcn3-204ENSMUST00000110301 Tceal9Q9DD24 104 aa16.53■□□□□ 0.24
Clcn3-204ENSMUST00000110301 Plch2A2AP18 1501 aa16.53■□□□□ 0.24
Clcn3-204ENSMUST00000110301 Mbd5B1AYB6 1498 aa16.53■□□□□ 0.24
Clcn3-204ENSMUST00000110301 Plcd4Q8K3R3 807 aa16.53■□□□□ 0.24
Clcn3-204ENSMUST00000110301 Slain2Q8CI08 581 aa16.52■□□□□ 0.24
Clcn3-204ENSMUST00000110301 BcanQ61361 883 aa16.52■□□□□ 0.24
Clcn3-204ENSMUST00000110301 Neurod6P48986 337 aa16.52■□□□□ 0.23
Clcn3-204ENSMUST00000110301 TefQ9JLC6 301 aa16.52■□□□□ 0.23
Clcn3-204ENSMUST00000110301 Nek4Q9Z1J2 792 aa16.52■□□□□ 0.23
Clcn3-204ENSMUST00000110301 PzpQ61838 1495 aa16.52■□□□□ 0.23
Clcn3-204ENSMUST00000110301 Setbp1Q9Z180 1582 aa16.52■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 63.2 ms