RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 ArxO35085 564 aa16.42■□□□□ 0.22
Nup88-203ENSMUST00000108531 Ciz1Q8VEH2 845 aa16.41■□□□□ 0.22
Nup88-203ENSMUST00000108531 Hs1bp3Q3TC93 395 aa16.41■□□□□ 0.22
Nup88-203ENSMUST00000108531 Znf541Q0GGX2 1363 aa16.4■□□□□ 0.22
Nup88-203ENSMUST00000108531 Uhrf1bp1B2KF50 1429 aa16.4■□□□□ 0.22
Nup88-203ENSMUST00000108531 Tnpo1Q8BFY9 898 aaKnown RBP16.39■□□□□ 0.21
Nup88-203ENSMUST00000108531 Stk26Q99JT2 416 aa16.39■□□□□ 0.21
Nup88-203ENSMUST00000108531 Ppp1r3fQ9JIG4 799 aa16.39■□□□□ 0.21
Nup88-203ENSMUST00000108531 Ttc21aQ8C0S4 1314 aa16.39■□□□□ 0.21
Nup88-203ENSMUST00000108531 Cluap1Q8R3P7 413 aa16.39■□□□□ 0.21
Nup88-203ENSMUST00000108531 Pnmal2G3X9N3 661 aa16.38■□□□□ 0.21
Nup88-203ENSMUST00000108531 CastP51125 788 aa16.38■□□□□ 0.21
Nup88-203ENSMUST00000108531 CltcQ68FD5 1675 aaKnown RBP16.38■□□□□ 0.21
Nup88-203ENSMUST00000108531 Cavin4A2AMM0 362 aa16.38■□□□□ 0.21
Nup88-203ENSMUST00000108531 Plcd4Q8K3R3 807 aa16.38■□□□□ 0.21
Nup88-203ENSMUST00000108531 Ankrd50F7BE84 1390 aa16.38■□□□□ 0.21
Nup88-203ENSMUST00000108531 PaskQ8CEE6 1383 aa16.38■□□□□ 0.21
Nup88-203ENSMUST00000108531 Prrc2bQ7TPM1 1486 aaKnown RBP16.36■□□□□ 0.21
Nup88-203ENSMUST00000108531 Zranb1Q7M760 708 aa16.36■□□□□ 0.21
Nup88-203ENSMUST00000108531 Usp32F8VPZ3 1604 aa16.35■□□□□ 0.21
Nup88-203ENSMUST00000108531 Cep170bQ80U49 1574 aa16.35■□□□□ 0.21
Nup88-203ENSMUST00000108531 Map7O88735 730 aa16.35■□□□□ 0.21
Nup88-203ENSMUST00000108531 Ccdc171E9Q1U1 1324 aa16.35■□□□□ 0.21
Nup88-203ENSMUST00000108531 AU019823E9PUQ3 292 aa16.35■□□□□ 0.21
Nup88-203ENSMUST00000108531 Ahdc1Q6PAL7 1594 aaKnown RBP16.34■□□□□ 0.21
Nup88-203ENSMUST00000108531 Shq1Q7TMX5 569 aa16.34■□□□□ 0.21
Nup88-203ENSMUST00000108531 Ccdc60Q8C4J0 545 aa16.34■□□□□ 0.21
Nup88-203ENSMUST00000108531 Arhgef28P97433 1693 aa16.33■□□□□ 0.21
Nup88-203ENSMUST00000108531 NinlQ6ZQ12 1394 aa16.33■□□□□ 0.21
Nup88-203ENSMUST00000108531 Rbm25B2RY56 838 aaKnown RBP16.33■□□□□ 0.2
Nup88-203ENSMUST00000108531 Mfap1aC0HKD8 439 aaKnown RBP16.33■□□□□ 0.2
Nup88-203ENSMUST00000108531 Mfap1bC0HKD9 439 aaKnown RBP16.33■□□□□ 0.2
Nup88-203ENSMUST00000108531 Maco1Q7TQE6 664 aaKnown RBP16.33■□□□□ 0.2
Nup88-203ENSMUST00000108531 Qser1A2BIE1 1698 aa16.33■□□□□ 0.2
Nup88-203ENSMUST00000108531 Gsto1O09131 240 aa16.33■□□□□ 0.2
Nup88-203ENSMUST00000108531 Atp1b4Q99ME6 356 aa16.33■□□□□ 0.2
Nup88-203ENSMUST00000108531 Pik3r4Q8VD65 1358 aa16.31■□□□□ 0.2
Nup88-203ENSMUST00000108531 Atp7bQ64446 1462 aa16.31■□□□□ 0.2
Nup88-203ENSMUST00000108531 FanciQ8K368 1330 aa16.3■□□□□ 0.2
Nup88-203ENSMUST00000108531 PtprmP28828 1452 aa16.3■□□□□ 0.2
Nup88-203ENSMUST00000108531 G3bp1P97855 465 aaKnown RBP16.3■□□□□ 0.2
Nup88-203ENSMUST00000108531 Antxr1Q9CZ52 562 aa16.3■□□□□ 0.2
Nup88-203ENSMUST00000108531 Fchsd2Q3USJ8 740 aa16.29■□□□□ 0.2
Nup88-203ENSMUST00000108531 Znf330Q922H9 316 aa16.29■□□□□ 0.2
Nup88-203ENSMUST00000108531 Kif18aQ91WD7 886 aa16.29■□□□□ 0.2
Nup88-203ENSMUST00000108531 Cul9Q80TT8 1865 aa16.29■□□□□ 0.2
Nup88-203ENSMUST00000108531 Abca14E9Q8F8 1683 aa16.29■□□□□ 0.2
Nup88-203ENSMUST00000108531 SkilQ60665 675 aa16.28■□□□□ 0.2
Nup88-203ENSMUST00000108531 Ipo4Q8VI75 1082 aa16.28■□□□□ 0.2
Nup88-203ENSMUST00000108531 Yeats2Q3TUF7 1407 aa16.28■□□□□ 0.2
Nup88-203ENSMUST00000108531 Kif2cQ922S8 721 aa16.28■□□□□ 0.2
Nup88-203ENSMUST00000108531 Swt1Q9DBQ9 907 aa16.28■□□□□ 0.2
Nup88-203ENSMUST00000108531 NktrP30415 1453 aa16.28■□□□□ 0.2
Nup88-203ENSMUST00000108531 Naip7Q9JIB3 1402 aa16.28■□□□□ 0.2
Nup88-203ENSMUST00000108531 Cdk19Q8BWD8 501 aa16.27■□□□□ 0.19
Nup88-203ENSMUST00000108531 Slc12a5Q91V14 1138 aa16.27■□□□□ 0.19
Nup88-203ENSMUST00000108531 Atp2b2Q9R0K7 1198 aa16.27■□□□□ 0.19
Nup88-203ENSMUST00000108531 Q4VA45 678 aa16.26■□□□□ 0.19
Nup88-203ENSMUST00000108531 Amer1Q7TS75 1132 aa16.26■□□□□ 0.19
Nup88-203ENSMUST00000108531 PalmQ9Z0P4 383 aa16.26■□□□□ 0.19
Nup88-203ENSMUST00000108531 Plekhg1F6S200 1446 aa16.26■□□□□ 0.19
Nup88-203ENSMUST00000108531 Catsper2A2ARP9 588 aa16.25■□□□□ 0.19
Nup88-203ENSMUST00000108531 Trim28Q62318 834 aa16.25■□□□□ 0.19
Nup88-203ENSMUST00000108531 Utp14aQ640M1 767 aaKnown RBP16.25■□□□□ 0.19
Nup88-203ENSMUST00000108531 KnstrnQ9D9Z1 312 aaKnown RBP16.25■□□□□ 0.19
Nup88-203ENSMUST00000108531 Brd1E9PZ26 1189 aaKnown RBP16.25■□□□□ 0.19
Nup88-203ENSMUST00000108531 Rangap1P46061 589 aaKnown RBP16.25■□□□□ 0.19
Nup88-203ENSMUST00000108531 4933402E13RikQ9D4D2 429 aa16.25■□□□□ 0.19
Nup88-203ENSMUST00000108531 Nsd3Q6P2L6 1439 aa16.24■□□□□ 0.19
Nup88-203ENSMUST00000108531 Terf2O35144 541 aa16.24■□□□□ 0.19
Nup88-203ENSMUST00000108531 Cog6Q8R3I3 657 aa16.24■□□□□ 0.19
Nup88-203ENSMUST00000108531 Q9D9H8 365 aa16.23■□□□□ 0.19
Nup88-203ENSMUST00000108531 Nutm1Q8BHP2 1126 aa16.22■□□□□ 0.19
Nup88-203ENSMUST00000108531 Aldh1l1Q8R0Y6 902 aa16.22■□□□□ 0.19
Nup88-203ENSMUST00000108531 Wwc1Q5SXA9 1104 aa16.22■□□□□ 0.19
Nup88-203ENSMUST00000108531 Plekhm2Q80TQ5 1018 aa16.22■□□□□ 0.19
Nup88-203ENSMUST00000108531 Cdc37l1Q9CZP7 335 aa16.22■□□□□ 0.19
Nup88-203ENSMUST00000108531 MvpQ9EQK5 861 aa16.21■□□□□ 0.19
Nup88-203ENSMUST00000108531 Q3UPC7 1272 aa16.21■□□□□ 0.18
Nup88-203ENSMUST00000108531 Tmco5bQ80X59 307 aa16.2■□□□□ 0.18
Nup88-203ENSMUST00000108531 PplQ9R269 1755 aa16.2■□□□□ 0.18
Nup88-203ENSMUST00000108531 Kif13aQ9EQW7 1749 aa16.2■□□□□ 0.18
Nup88-203ENSMUST00000108531 Cetn4Q8K4K1 168 aa16.2■□□□□ 0.18
Nup88-203ENSMUST00000108531 Chmp4bQ9D8B3 224 aaKnown RBP16.2■□□□□ 0.18
Nup88-203ENSMUST00000108531 Nectin2P32507 530 aa16.19■□□□□ 0.18
Nup88-203ENSMUST00000108531 Gm10093D3YYI8 482 aa16.19■□□□□ 0.18
Nup88-203ENSMUST00000108531 Spryd3E9Q9B3 442 aa16.19■□□□□ 0.18
Nup88-203ENSMUST00000108531 Hdac1O09106 482 aaKnown RBP16.19■□□□□ 0.18
Nup88-203ENSMUST00000108531 Vamp4O70480 141 aa16.19■□□□□ 0.18
Nup88-203ENSMUST00000108531 Ppp1r15aP17564 657 aa16.19■□□□□ 0.18
Nup88-203ENSMUST00000108531 Ankrd44B2RXR6 993 aa16.18■□□□□ 0.18
Nup88-203ENSMUST00000108531 Nwd1A6H603 1563 aa16.18■□□□□ 0.18
Nup88-203ENSMUST00000108531 Map3k19E9Q3S4 1311 aa16.18■□□□□ 0.18
Nup88-203ENSMUST00000108531 Ncapd2Q8K2Z4 1392 aa16.18■□□□□ 0.18
Nup88-203ENSMUST00000108531 Ssh1Q76I79 1042 aa16.18■□□□□ 0.18
Nup88-203ENSMUST00000108531 Itsn1Q9Z0R4 1714 aa16.17■□□□□ 0.18
Nup88-203ENSMUST00000108531 Gnai1B2RSH2 354 aa16.17■□□□□ 0.18
Nup88-203ENSMUST00000108531 LifrP42703 1092 aa16.17■□□□□ 0.18
Nup88-203ENSMUST00000108531 Mcm4P49717 862 aa16.17■□□□□ 0.18
Nup88-203ENSMUST00000108531 Fgd1P52734 960 aa16.17■□□□□ 0.18
Retrieved 100 of 22,080 RNA–protein pairs in 7.1 ms