RNA–Protein interactions for RNA: ENSMUST00000085096.9

Ccdc88c-202, Transcript of Protein Daple, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ccdc88c, Length 6,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88c-202ENSMUST00000085096 Rapgef4Q9EQZ6 1011 aa18.1■□□□□ 0.49
Ccdc88c-202ENSMUST00000085096 Dixdc1Q80Y83 711 aa18.1■□□□□ 0.49
Ccdc88c-202ENSMUST00000085096 Dzip1Q8BMD2 852 aa18.1■□□□□ 0.49
Ccdc88c-202ENSMUST00000085096 Kdm5bQ80Y84 1544 aa18.1■□□□□ 0.49
Ccdc88c-202ENSMUST00000085096 Cavin4A2AMM0 362 aa18.09■□□□□ 0.49
Ccdc88c-202ENSMUST00000085096 Znf704Q9ERQ3 566 aa18.09■□□□□ 0.49
Ccdc88c-202ENSMUST00000085096 Tom1O88746 492 aa18.08■□□□□ 0.49
Ccdc88c-202ENSMUST00000085096 TmpoQ61033 693 aaKnown RBP18.08■□□□□ 0.49
Ccdc88c-202ENSMUST00000085096 Klc3Q91W40 508 aa18.08■□□□□ 0.49
Ccdc88c-202ENSMUST00000085096 Krt82Q99M74 516 aa18.08■□□□□ 0.49
Ccdc88c-202ENSMUST00000085096 Trim58Q5NCC9 485 aa18.08■□□□□ 0.49
Ccdc88c-202ENSMUST00000085096 Eif4g3Q80XI3 1579 aaKnown RBP18.08■□□□□ 0.48
Ccdc88c-202ENSMUST00000085096 Zfp444Q3TDV8 331 aaKnown RBP18.07■□□□□ 0.48
Ccdc88c-202ENSMUST00000085096 Washc4Q3UMB9 1173 aa18.07■□□□□ 0.48
Ccdc88c-202ENSMUST00000085096 Kri1Q8VDQ9 704 aaKnown RBP18.07■□□□□ 0.48
Ccdc88c-202ENSMUST00000085096 NgdnQ9DB96 315 aaKnown RBP18.07■□□□□ 0.48
Ccdc88c-202ENSMUST00000085096 Cwc27Q3TKY6 469 aa18.07■□□□□ 0.48
Ccdc88c-202ENSMUST00000085096 Slc5a1Q8C3K6 665 aa18.07■□□□□ 0.48
Ccdc88c-202ENSMUST00000085096 Polr3gQ6NXY9 223 aa18.06■□□□□ 0.48
Ccdc88c-202ENSMUST00000085096 Elp1Q7TT37 1333 aaKnown RBP18.06■□□□□ 0.48
Ccdc88c-202ENSMUST00000085096 Adcy10Q8C0T9 1614 aa18.06■□□□□ 0.48
Ccdc88c-202ENSMUST00000085096 KarsQ99MN1 595 aaKnown RBP18.06■□□□□ 0.48
Ccdc88c-202ENSMUST00000085096 Cyp46a1Q9WVK8 500 aa18.05■□□□□ 0.48
Ccdc88c-202ENSMUST00000085096 Shroom2A2ALU4 1481 aa18.05■□□□□ 0.48
Ccdc88c-202ENSMUST00000085096 Rbm26Q6NZN0 1012 aaKnown RBP18.05■□□□□ 0.48
Ccdc88c-202ENSMUST00000085096 Atp7aQ64430 1491 aa18.05■□□□□ 0.48
Ccdc88c-202ENSMUST00000085096 Tpm3-rs7D3Z2H9 248 aa18.05■□□□□ 0.48
Ccdc88c-202ENSMUST00000085096 Eno4Q8C042 619 aa18.05■□□□□ 0.48
Ccdc88c-202ENSMUST00000085096 Smarce1O54941 411 aaKnown RBP18.04■□□□□ 0.48
Ccdc88c-202ENSMUST00000085096 IkQ9Z1M8 557 aaKnown RBP18.04■□□□□ 0.48
Ccdc88c-202ENSMUST00000085096 Klhdc4Q921I2 584 aa18.04■□□□□ 0.48
Ccdc88c-202ENSMUST00000085096 Nek4Q9Z1J2 792 aa18.04■□□□□ 0.48
Ccdc88c-202ENSMUST00000085096 Adgrb2Q8CGM1 1561 aa18.04■□□□□ 0.48
Ccdc88c-202ENSMUST00000085096 Ppip5k1A2ARP1 1436 aa18.03■□□□□ 0.48
Ccdc88c-202ENSMUST00000085096 Gnl3lQ6PGG6 577 aaKnown RBP18.03■□□□□ 0.48
Ccdc88c-202ENSMUST00000085096 Flad1Q8R123 492 aa18.03■□□□□ 0.48
Ccdc88c-202ENSMUST00000085096 Ncbp3Q8BZR9 615 aaKnown RBP18.03■□□□□ 0.48
Ccdc88c-202ENSMUST00000085096 Ptch1Q61115 1434 aa18.03■□□□□ 0.48
Ccdc88c-202ENSMUST00000085096 Hdgfl1Q2VPR5 283 aa18.03■□□□□ 0.48
Ccdc88c-202ENSMUST00000085096 Rrs1Q9CYH6 365 aaKnown RBP18.03■□□□□ 0.48
Ccdc88c-202ENSMUST00000085096 Gtf2f1Q3THK3 508 aaKnown RBP18.02■□□□□ 0.48
Ccdc88c-202ENSMUST00000085096 Cgnl1Q6AW69 1298 aa18.02■□□□□ 0.48
Ccdc88c-202ENSMUST00000085096 Slc52a2Q9D8F3 450 aa18.02■□□□□ 0.48
Ccdc88c-202ENSMUST00000085096 Ak7Q9D2H2 614 aa18.02■□□□□ 0.48
Ccdc88c-202ENSMUST00000085096 Frmpd2A0A140LI67 1392 aa18.02■□□□□ 0.48
Ccdc88c-202ENSMUST00000085096 Dnttip2Q8R2M2 758 aaKnown RBP18.02■□□□□ 0.47
Ccdc88c-202ENSMUST00000085096 R3hcc1Q8BSI6 488 aa18.01■□□□□ 0.47
Ccdc88c-202ENSMUST00000085096 Q4VA45 678 aa18.01■□□□□ 0.47
Ccdc88c-202ENSMUST00000085096 ZgpatQ8VDM1 511 aa18.01■□□□□ 0.47
Ccdc88c-202ENSMUST00000085096 Igflr1Q3U4N7 345 aa18.01■□□□□ 0.47
Ccdc88c-202ENSMUST00000085096 Trim34aQ99PP6 485 aa18.01■□□□□ 0.47
Ccdc88c-202ENSMUST00000085096 Nsfl1cQ9CZ44 370 aaKnown RBP18.01■□□□□ 0.47
Ccdc88c-202ENSMUST00000085096 Babam1Q3UI43 333 aa18.01■□□□□ 0.47
Ccdc88c-202ENSMUST00000085096 TnnQ80Z71 1560 aa18■□□□□ 0.47
Ccdc88c-202ENSMUST00000085096 Stard3nlQ9DCI3 235 aa18■□□□□ 0.47
Ccdc88c-202ENSMUST00000085096 Slc12a5Q91V14 1138 aa18■□□□□ 0.47
Ccdc88c-202ENSMUST00000085096 Zeb2Q9R0G7 1215 aa18■□□□□ 0.47
Ccdc88c-202ENSMUST00000085096 Ltv1Q6NSQ7 470 aaKnown RBP18■□□□□ 0.47
Ccdc88c-202ENSMUST00000085096 Gm21969J3QJZ1 289 aa18■□□□□ 0.47
Ccdc88c-202ENSMUST00000085096 Nol11Q8BJW5 723 aaKnown RBP18■□□□□ 0.47
Ccdc88c-202ENSMUST00000085096 Srgap3Q812A2 1099 aa17.99■□□□□ 0.47
Ccdc88c-202ENSMUST00000085096 Ccdc96Q9CR92 584 aa17.99■□□□□ 0.47
Ccdc88c-202ENSMUST00000085096 Agtpbp1Q641K1 1218 aa17.99■□□□□ 0.47
Ccdc88c-202ENSMUST00000085096 Msl1Q6PDM1 616 aa17.99■□□□□ 0.47
Ccdc88c-202ENSMUST00000085096 Znf518aB2RRF6 1478 aaKnown RBP17.99■□□□□ 0.47
Ccdc88c-202ENSMUST00000085096 Smarca5Q91ZW3 1051 aaKnown RBP17.99■□□□□ 0.47
Ccdc88c-202ENSMUST00000085096 Gigyf1Q99MR1 1044 aaKnown RBP17.99■□□□□ 0.47
Ccdc88c-202ENSMUST00000085096 Kcnh5Q920E3 988 aa17.99■□□□□ 0.47
Ccdc88c-202ENSMUST00000085096 Fkbp5Q64378 456 aa17.98■□□□□ 0.47
Ccdc88c-202ENSMUST00000085096 IbtkQ6ZPR6 1352 aaKnown RBP17.98■□□□□ 0.47
Ccdc88c-202ENSMUST00000085096 Rusc2Q80U22 1514 aa17.97■□□□□ 0.47
Ccdc88c-202ENSMUST00000085096 Nlrp3Q8R4B8 1033 aa17.97■□□□□ 0.47
Ccdc88c-202ENSMUST00000085096 Gnai2P08752 355 aaKnown RBP17.97■□□□□ 0.47
Ccdc88c-202ENSMUST00000085096 Paf1Q8K2T8 535 aa17.97■□□□□ 0.47
Ccdc88c-202ENSMUST00000085096 Amotl2Q8K371 772 aa17.97■□□□□ 0.47
Ccdc88c-202ENSMUST00000085096 Ipo9Q91YE6 1041 aa17.97■□□□□ 0.47
Ccdc88c-202ENSMUST00000085096 Mad1l1Q9WTX8 717 aaKnown RBP17.97■□□□□ 0.47
Ccdc88c-202ENSMUST00000085096 Asxl1P59598 1514 aa17.97■□□□□ 0.47
Ccdc88c-202ENSMUST00000085096 MpndQ3TV65 487 aa17.97■□□□□ 0.47
Ccdc88c-202ENSMUST00000085096 Exoc5Q3TPX4 708 aa17.96■□□□□ 0.47
Ccdc88c-202ENSMUST00000085096 Tmc1Q8R4P5 757 aa17.96■□□□□ 0.47
Ccdc88c-202ENSMUST00000085096 NinlQ6ZQ12 1394 aa17.96■□□□□ 0.47
Ccdc88c-202ENSMUST00000085096 Gpatch11Q3UFS4 262 aa17.96■□□□□ 0.47
Ccdc88c-202ENSMUST00000085096 SfswapQ3USH5 945 aaKnown RBP17.96■□□□□ 0.47
Ccdc88c-202ENSMUST00000085096 Unc13aQ4KUS2 1712 aa17.96■□□□□ 0.47
Ccdc88c-202ENSMUST00000085096 Trim34bJ3QNR8 485 aa17.95■□□□□ 0.46
Ccdc88c-202ENSMUST00000085096 Usp48Q3V0C5 1052 aa17.95■□□□□ 0.46
Ccdc88c-202ENSMUST00000085096 Erc2Q6PH08 957 aa17.95■□□□□ 0.46
Ccdc88c-202ENSMUST00000085096 Adgrl3Q80TS3 1537 aa17.95■□□□□ 0.46
Ccdc88c-202ENSMUST00000085096 Kif20aP97329 887 aa17.95■□□□□ 0.46
Ccdc88c-202ENSMUST00000085096 Filip1lQ6P6L0 1131 aa17.95■□□□□ 0.46
Ccdc88c-202ENSMUST00000085096 GptQ8QZR5 496 aa17.95■□□□□ 0.46
Ccdc88c-202ENSMUST00000085096 Me1P06801 572 aa17.95■□□□□ 0.46
Ccdc88c-202ENSMUST00000085096 Eif3bQ8JZQ9 803 aaKnown RBP17.95■□□□□ 0.46
Ccdc88c-202ENSMUST00000085096 Arhgef12Q8R4H2 1543 aaKnown RBP17.95■□□□□ 0.46
Ccdc88c-202ENSMUST00000085096 Ssh2Q5SW75 1423 aa17.94■□□□□ 0.46
Ccdc88c-202ENSMUST00000085096 Arhgef40Q3UPH7 1517 aa17.94■□□□□ 0.46
Ccdc88c-202ENSMUST00000085096 SlkO54988 1233 aa17.94■□□□□ 0.46
Ccdc88c-202ENSMUST00000085096 Tut1Q8R3F9 869 aa17.94■□□□□ 0.46
Ccdc88c-202ENSMUST00000085096 Naip7Q9JIB3 1402 aa17.94■□□□□ 0.46
Retrieved 100 of 22,080 RNA–protein pairs in 10.6 ms