RNA–Protein interactions for RNA: ENSMUST00000071057.13

Ddx55-201, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx55, Length 2,799 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-201ENSMUST00000071057 Asxl2Q8BZ32 1370 aa14.72□□□□□ -0.05
Ddx55-201ENSMUST00000071057 Plcd3Q8K2J0 785 aa14.72□□□□□ -0.05
Ddx55-201ENSMUST00000071057 Atp2b2Q9R0K7 1198 aa14.71□□□□□ -0.05
Ddx55-201ENSMUST00000071057 P2rx7Q9Z1M0 595 aa14.71□□□□□ -0.05
Ddx55-201ENSMUST00000071057 Arhgap23Q69ZH9 1483 aa14.71□□□□□ -0.05
Ddx55-201ENSMUST00000071057 Ercc6l2Q9JIM3 1537 aa14.71□□□□□ -0.05
Ddx55-201ENSMUST00000071057 Rrp9Q91WM3 475 aaKnown RBP14.71□□□□□ -0.06
Ddx55-201ENSMUST00000071057 Apbb1Q9QXJ1 710 aa14.71□□□□□ -0.06
Ddx55-201ENSMUST00000071057 Scaf11E9PZM7 1456 aaKnown RBP14.69□□□□□ -0.06
Ddx55-201ENSMUST00000071057 Cald1E9QA15 768 aaKnown RBP14.69□□□□□ -0.06
Ddx55-201ENSMUST00000071057 Ccdc30Q8BVF4 654 aa14.69□□□□□ -0.06
Ddx55-201ENSMUST00000071057 Tcerg1Q8CGF7 1100 aaKnown RBP14.69□□□□□ -0.06
Ddx55-201ENSMUST00000071057 Itsn1Q9Z0R4 1714 aa14.69□□□□□ -0.06
Ddx55-201ENSMUST00000071057 IbtkQ6ZPR6 1352 aaKnown RBP14.68□□□□□ -0.06
Ddx55-201ENSMUST00000071057 GsdmaQ9EST1 446 aa14.68□□□□□ -0.06
Ddx55-201ENSMUST00000071057 Gsto1O09131 240 aa14.68□□□□□ -0.06
Ddx55-201ENSMUST00000071057 Cdk19Q8BWD8 501 aa14.68□□□□□ -0.06
Ddx55-201ENSMUST00000071057 Arhgef28P97433 1693 aa14.67□□□□□ -0.06
Ddx55-201ENSMUST00000071057 Txndc2Q6P902 515 aa14.67□□□□□ -0.06
Ddx55-201ENSMUST00000071057 Eif2ak4Q9QZ05 1648 aa14.66□□□□□ -0.06
Ddx55-201ENSMUST00000071057 ChgaP26339 463 aaKnown RBP14.66□□□□□ -0.06
Ddx55-201ENSMUST00000071057 Plekhh1Q80TI1 1356 aa14.66□□□□□ -0.06
Ddx55-201ENSMUST00000071057 Uspl1Q3ULM6 1089 aa14.65□□□□□ -0.06
Ddx55-201ENSMUST00000071057 Liat1Q810M6 228 aa14.65□□□□□ -0.06
Ddx55-201ENSMUST00000071057 Psme1P97371 249 aa14.65□□□□□ -0.06
Ddx55-201ENSMUST00000071057 IbspQ61711 324 aa14.65□□□□□ -0.06
Ddx55-201ENSMUST00000071057 KdrP35918 1367 aa14.64□□□□□ -0.07
Ddx55-201ENSMUST00000071057 Rwdd1Q9CQK7 243 aa14.64□□□□□ -0.07
Ddx55-201ENSMUST00000071057 Gas2l2Q5SSG4 860 aa14.64□□□□□ -0.07
Ddx55-201ENSMUST00000071057 U2af1Q9D883 239 aaKnown RBP14.64□□□□□ -0.07
Ddx55-201ENSMUST00000071057 RictorQ6QI06 1708 aa14.64□□□□□ -0.07
Ddx55-201ENSMUST00000071057 Apaf1O88879 1249 aa14.63□□□□□ -0.07
Ddx55-201ENSMUST00000071057 Sh3bp1P55194 680 aa14.63□□□□□ -0.07
Ddx55-201ENSMUST00000071057 Pak3Q61036 559 aa14.63□□□□□ -0.07
Ddx55-201ENSMUST00000071057 Cers3Q1A3B0 383 aa14.63□□□□□ -0.07
Ddx55-201ENSMUST00000071057 Tsen2Q6P7W5 460 aa14.63□□□□□ -0.07
Ddx55-201ENSMUST00000071057 Atxn3Q9CVD2 355 aa14.63□□□□□ -0.07
Ddx55-201ENSMUST00000071057 Abca14E9Q8F8 1683 aa14.63□□□□□ -0.07
Ddx55-201ENSMUST00000071057 Nrxn1Q9CS84 1514 aa14.62□□□□□ -0.07
Ddx55-201ENSMUST00000071057 NinlQ6ZQ12 1394 aa14.62□□□□□ -0.07
Ddx55-201ENSMUST00000071057 Ecm2Q5FW85 670 aa14.62□□□□□ -0.07
Ddx55-201ENSMUST00000071057 4933416C03RikQ3V063 378 aa14.62□□□□□ -0.07
Ddx55-201ENSMUST00000071057 Prkrip1Q9CWV6 186 aaKnown RBP14.62□□□□□ -0.07
Ddx55-201ENSMUST00000071057 Kcng1A2BDX4 514 aa14.61□□□□□ -0.07
Ddx55-201ENSMUST00000071057 Safb2Q80YR5 991 aaKnown RBP14.61□□□□□ -0.07
Ddx55-201ENSMUST00000071057 Ttc41Q692V3 1318 aa14.6□□□□□ -0.07
Ddx55-201ENSMUST00000071057 Map4k4P97820 1233 aaKnown RBP14.6□□□□□ -0.07
Ddx55-201ENSMUST00000071057 Ralbp1Q62172 648 aa14.6□□□□□ -0.07
Ddx55-201ENSMUST00000071057 Chrm1P12657 460 aa14.6□□□□□ -0.07
Ddx55-201ENSMUST00000071057 Sparcl1P70663 650 aa14.6□□□□□ -0.07
Ddx55-201ENSMUST00000071057 Zc3h13E9Q784 1729 aaKnown RBP14.58□□□□□ -0.08
Ddx55-201ENSMUST00000071057 IghaA0A0A6YXW6 389 aa14.58□□□□□ -0.08
Ddx55-201ENSMUST00000071057 Polr3glQ8R0C0 218 aa14.57□□□□□ -0.08
Ddx55-201ENSMUST00000071057 Plekhg1F6S200 1446 aa14.57□□□□□ -0.08
Ddx55-201ENSMUST00000071057 Trim26Q99PN3 545 aa14.56□□□□□ -0.08
Ddx55-201ENSMUST00000071057 NktrP30415 1453 aa14.56□□□□□ -0.08
Ddx55-201ENSMUST00000071057 FanciQ8K368 1330 aa14.56□□□□□ -0.08
Ddx55-201ENSMUST00000071057 Tmem132aQ922P8 1018 aa14.56□□□□□ -0.08
Ddx55-201ENSMUST00000071057 ErmnQ5EBJ4 281 aa14.55□□□□□ -0.08
Ddx55-201ENSMUST00000071057 Map3k19E9Q3S4 1311 aa14.55□□□□□ -0.08
Ddx55-201ENSMUST00000071057 PplQ9R269 1755 aa14.54□□□□□ -0.08
Ddx55-201ENSMUST00000071057 Birc3O08863 600 aa14.54□□□□□ -0.08
Ddx55-201ENSMUST00000071057 Iqsec2Q5DU25 1478 aa14.54□□□□□ -0.08
Ddx55-201ENSMUST00000071057 Mbd3Q9Z2D8 285 aaKnown RBP14.53□□□□□ -0.08
Ddx55-201ENSMUST00000071057 Med14A2ABV5 1459 aaKnown RBP14.53□□□□□ -0.08
Ddx55-201ENSMUST00000071057 Dip2aQ8BWT5 1523 aa14.53□□□□□ -0.08
Ddx55-201ENSMUST00000071057 Adgrl1Q80TR1 1466 aa14.53□□□□□ -0.08
Ddx55-201ENSMUST00000071057 Nwd1A6H603 1563 aa14.52□□□□□ -0.08
Ddx55-201ENSMUST00000071057 B4galnt3Q6L8S8 986 aa14.52□□□□□ -0.08
Ddx55-201ENSMUST00000071057 HnrnpmQ9D0E1 729 aaKnown RBP14.52□□□□□ -0.08
Ddx55-201ENSMUST00000071057 Adamtsl3G3UXC7 1706 aa14.52□□□□□ -0.08
Ddx55-201ENSMUST00000071057 TnikP83510 1323 aa14.51□□□□□ -0.09
Ddx55-201ENSMUST00000071057 Ksr2Q3UVC0 959 aa14.51□□□□□ -0.09
Ddx55-201ENSMUST00000071057 Dusp27Q148W8 1138 aa14.51□□□□□ -0.09
Ddx55-201ENSMUST00000071057 Mapk8ip3Q9ESN9 1337 aa14.51□□□□□ -0.09
Ddx55-201ENSMUST00000071057 Egfem1Q8C088 590 aa14.51□□□□□ -0.09
Ddx55-201ENSMUST00000071057 Pank1Q8K4K6 548 aa14.51□□□□□ -0.09
Ddx55-201ENSMUST00000071057 Tspyl2Q7TQI8 677 aa14.5□□□□□ -0.09
Ddx55-201ENSMUST00000071057 Dbr1Q923B1 550 aa14.5□□□□□ -0.09
Ddx55-201ENSMUST00000071057 Slc12a5Q91V14 1138 aa14.49□□□□□ -0.09
Ddx55-201ENSMUST00000071057 Ttll13A4Q9F6 804 aa14.47□□□□□ -0.09
Ddx55-201ENSMUST00000071057 PalmQ9Z0P4 383 aa14.47□□□□□ -0.09
Ddx55-201ENSMUST00000071057 Kdm2bQ6P1G2 1309 aa14.47□□□□□ -0.09
Ddx55-201ENSMUST00000071057 Chd2E9PZM4 1827 aaKnown RBP14.46□□□□□ -0.09
Ddx55-201ENSMUST00000071057 Idi2Q8BFZ6 227 aa14.45□□□□□ -0.1
Ddx55-201ENSMUST00000071057 Ripply1Q2WG77 201 aa14.44□□□□□ -0.1
Ddx55-201ENSMUST00000071057 Dip2bQ3UH60 1574 aa14.43□□□□□ -0.1
Ddx55-201ENSMUST00000071057 Cavin4A2AMM0 362 aa14.43□□□□□ -0.1
Ddx55-201ENSMUST00000071057 Trim28Q62318 834 aa14.43□□□□□ -0.1
Ddx55-201ENSMUST00000071057 Chmp5Q9D7S9 219 aa14.43□□□□□ -0.1
Ddx55-201ENSMUST00000071057 Nom1Q3UFM5 854 aaKnown RBP14.42□□□□□ -0.1
Ddx55-201ENSMUST00000071057 Trim58Q5NCC9 485 aa14.42□□□□□ -0.1
Ddx55-201ENSMUST00000071057 PzpQ61838 1495 aa14.42□□□□□ -0.1
Ddx55-201ENSMUST00000071057 Pik3c2bE9QAN8 1632 aa14.42□□□□□ -0.1
Ddx55-201ENSMUST00000071057 Ccar1Q8CH18 1146 aaKnown RBP14.42□□□□□ -0.1
Ddx55-201ENSMUST00000071057 Senp3Q9EP97 568 aaKnown RBP14.42□□□□□ -0.1
Ddx55-201ENSMUST00000071057 Gemin5Q8BX17 1502 aaKnown RBP14.42□□□□□ -0.1
Ddx55-201ENSMUST00000071057 MyclP10166 368 aa14.41□□□□□ -0.1
Ddx55-201ENSMUST00000071057 Plin1Q8CGN5 517 aa14.41□□□□□ -0.1
Ddx55-201ENSMUST00000071057 Dhx30Q99PU8 1217 aaKnown RBP14.41□□□□□ -0.1
Retrieved 100 of 22,080 RNA–protein pairs in 13.9 ms