RNA–Protein interactions for RNA: ENSMUST00000054588.14

Col9a1-201, Transcript of Collagen alpha-1(IX) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col9a1, Length 3,834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-201ENSMUST00000054588 HnrnpmQ9D0E1 729 aaKnown RBP13.59□□□□□ -0.23
Col9a1-201ENSMUST00000054588 Scaf11E9PZM7 1456 aaKnown RBP13.59□□□□□ -0.23
Col9a1-201ENSMUST00000054588 Ppp2r3aB2RXC8 1150 aa13.58□□□□□ -0.24
Col9a1-201ENSMUST00000054588 Cdk5rap2Q8K389 1822 aa13.58□□□□□ -0.24
Col9a1-201ENSMUST00000054588 Gm21190A0A0G2JGJ6 266 aa13.57□□□□□ -0.24
Col9a1-201ENSMUST00000054588 Plxnc1Q9QZC2 1574 aa13.57□□□□□ -0.24
Col9a1-201ENSMUST00000054588 Abca9Q8K449 1623 aa13.57□□□□□ -0.24
Col9a1-201ENSMUST00000054588 Myom1Q62234 1667 aaKnown RBP13.56□□□□□ -0.24
Col9a1-201ENSMUST00000054588 Gas2l2Q5SSG4 860 aa13.56□□□□□ -0.24
Col9a1-201ENSMUST00000054588 Duxf3A0A0N4SV92 674 aa13.56□□□□□ -0.24
Col9a1-201ENSMUST00000054588 Prex1Q69ZK0 1650 aa13.56□□□□□ -0.24
Col9a1-201ENSMUST00000054588 Gli2Q0VGT2 1544 aa13.56□□□□□ -0.24
Col9a1-201ENSMUST00000054588 Topbp1Q6ZQF0 1515 aa13.56□□□□□ -0.24
Col9a1-201ENSMUST00000054588 Lrrc7Q80TE7 1490 aa13.56□□□□□ -0.24
Col9a1-201ENSMUST00000054588 MpripP97434 1024 aa13.56□□□□□ -0.24
Col9a1-201ENSMUST00000054588 Rtf1A2AQ19 715 aaKnown RBP13.55□□□□□ -0.24
Col9a1-201ENSMUST00000054588 Map7O88735 730 aa13.55□□□□□ -0.24
Col9a1-201ENSMUST00000054588 Ehbp1l1Q99MS7 1716 aa13.55□□□□□ -0.24
Col9a1-201ENSMUST00000054588 Q3TQI7 289 aaKnown RBP13.55□□□□□ -0.24
Col9a1-201ENSMUST00000054588 KarsQ99MN1 595 aaKnown RBP13.55□□□□□ -0.24
Col9a1-201ENSMUST00000054588 Tecpr2Q3UH45 1423 aa13.54□□□□□ -0.24
Col9a1-201ENSMUST00000054588 Ccdc146E9Q9F7 977 aa13.54□□□□□ -0.24
Col9a1-201ENSMUST00000054588 Dusp27Q148W8 1138 aa13.54□□□□□ -0.24
Col9a1-201ENSMUST00000054588 Adgrl3Q80TS3 1537 aa13.54□□□□□ -0.24
Col9a1-201ENSMUST00000054588 MaddQ80U28 1577 aa13.54□□□□□ -0.24
Col9a1-201ENSMUST00000054588 Iqsec2Q5DU25 1478 aa13.53□□□□□ -0.24
Col9a1-201ENSMUST00000054588 Rabep1O35551 862 aa13.53□□□□□ -0.24
Col9a1-201ENSMUST00000054588 Trpm1Q2TV84 1622 aa13.53□□□□□ -0.24
Col9a1-201ENSMUST00000054588 Mcm10Q0VBD2 885 aa13.53□□□□□ -0.24
Col9a1-201ENSMUST00000054588 Plcb2A3KGF7 1181 aa13.52□□□□□ -0.24
Col9a1-201ENSMUST00000054588 G3bp1P97855 465 aaKnown RBP13.52□□□□□ -0.25
Col9a1-201ENSMUST00000054588 Hs1bp3Q3TC93 395 aa13.52□□□□□ -0.25
Col9a1-201ENSMUST00000054588 Rlbp1Q9Z275 317 aa13.52□□□□□ -0.25
Col9a1-201ENSMUST00000054588 Atp10aO54827 1508 aa13.51□□□□□ -0.25
Col9a1-201ENSMUST00000054588 Chmp4cQ9D7F7 232 aa13.51□□□□□ -0.25
Col9a1-201ENSMUST00000054588 Rbm25B2RY56 838 aaKnown RBP13.51□□□□□ -0.25
Col9a1-201ENSMUST00000054588 Sptbn5F6UCX4 1208 aa13.51□□□□□ -0.25
Col9a1-201ENSMUST00000054588 Pip4k2bQ80XI4 416 aa13.51□□□□□ -0.25
Col9a1-201ENSMUST00000054588 Usp16Q99LG0 825 aa13.51□□□□□ -0.25
Col9a1-201ENSMUST00000054588 Cabp2Q9JLK4 216 aa13.51□□□□□ -0.25
Col9a1-201ENSMUST00000054588 Ap3b2Q9JME5 1082 aa13.5□□□□□ -0.25
Col9a1-201ENSMUST00000054588 Akap12Q9WTQ5 1684 aa13.5□□□□□ -0.25
Col9a1-201ENSMUST00000054588 Stk31Q99MW1 1018 aa13.5□□□□□ -0.25
Col9a1-201ENSMUST00000054588 AU022751B1B0V2 589 aa13.5□□□□□ -0.25
Col9a1-201ENSMUST00000054588 Bcl2l13P59017 434 aa13.5□□□□□ -0.25
Col9a1-201ENSMUST00000054588 Aplp1Q03157 653 aa13.5□□□□□ -0.25
Col9a1-201ENSMUST00000054588 Stk11ipQ3TAA7 1072 aa13.5□□□□□ -0.25
Col9a1-201ENSMUST00000054588 P2rx7Q9Z1M0 595 aa13.5□□□□□ -0.25
Col9a1-201ENSMUST00000054588 Larp1bA0A0A6YXJ7 370 aaKnown RBP13.49□□□□□ -0.25
Col9a1-201ENSMUST00000054588 Sipa1l1Q8C0T5 1782 aa13.49□□□□□ -0.25
Col9a1-201ENSMUST00000054588 Cavin4A2AMM0 362 aa13.49□□□□□ -0.25
Col9a1-201ENSMUST00000054588 PalmQ9Z0P4 383 aa13.49□□□□□ -0.25
Col9a1-201ENSMUST00000054588 PtprtQ99M80 1454 aa13.48□□□□□ -0.25
Col9a1-201ENSMUST00000054588 Ccdc171E9Q1U1 1324 aa13.48□□□□□ -0.25
Col9a1-201ENSMUST00000054588 Chmp4bQ9D8B3 224 aaKnown RBP13.48□□□□□ -0.25
Col9a1-201ENSMUST00000054588 Phlpp2Q8BXA7 1320 aa13.47□□□□□ -0.25
Col9a1-201ENSMUST00000054588 Tbc1d32Q3URV1 1296 aa13.47□□□□□ -0.25
Col9a1-201ENSMUST00000054588 Triml2E9PW10 424 aa13.47□□□□□ -0.25
Col9a1-201ENSMUST00000054588 KnstrnQ9D9Z1 312 aaKnown RBP13.47□□□□□ -0.25
Col9a1-201ENSMUST00000054588 Ptch1Q61115 1434 aa13.47□□□□□ -0.25
Col9a1-201ENSMUST00000054588 4933402E13RikQ9D4D2 429 aa13.46□□□□□ -0.25
Col9a1-201ENSMUST00000054588 Med14A2ABV5 1459 aaKnown RBP13.46□□□□□ -0.25
Col9a1-201ENSMUST00000054588 Ggnbp2Q5SV77 696 aa13.46□□□□□ -0.25
Col9a1-201ENSMUST00000054588 Tnpo1Q8BFY9 898 aaKnown RBP13.46□□□□□ -0.25
Col9a1-201ENSMUST00000054588 Pdlim2Q8R1G6 349 aa13.46□□□□□ -0.25
Col9a1-201ENSMUST00000054588 Cdc42bpgQ80UW5 1551 aa13.46□□□□□ -0.25
Col9a1-201ENSMUST00000054588 PaskQ8CEE6 1383 aa13.46□□□□□ -0.26
Col9a1-201ENSMUST00000054588 Adgrl1Q80TR1 1466 aa13.46□□□□□ -0.26
Col9a1-201ENSMUST00000054588 Ino80Q6ZPV2 1559 aa13.45□□□□□ -0.26
Col9a1-201ENSMUST00000054588 Hsp90b1P08113 802 aaKnown RBP13.45□□□□□ -0.26
Col9a1-201ENSMUST00000054588 CastP51125 788 aa13.44□□□□□ -0.26
Col9a1-201ENSMUST00000054588 Slc12a5Q91V14 1138 aa13.43□□□□□ -0.26
Col9a1-201ENSMUST00000054588 Fchsd2Q3USJ8 740 aa13.43□□□□□ -0.26
Col9a1-201ENSMUST00000054588 Mroh1E0CZ22 1640 aa13.43□□□□□ -0.26
Col9a1-201ENSMUST00000054588 Nrxn1Q9CS84 1514 aa13.43□□□□□ -0.26
Col9a1-201ENSMUST00000054588 FanciQ8K368 1330 aa13.43□□□□□ -0.26
Col9a1-201ENSMUST00000054588 Ythdc1E9Q5K9 736 aaKnown RBP13.43□□□□□ -0.26
Col9a1-201ENSMUST00000054588 Swt1Q9DBQ9 907 aa13.43□□□□□ -0.26
Col9a1-201ENSMUST00000054588 Ttc37F8VPK0 1563 aa13.42□□□□□ -0.26
Col9a1-201ENSMUST00000054588 Q4VA45 678 aa13.42□□□□□ -0.26
Col9a1-201ENSMUST00000054588 Cfap65Q3V0B4 1847 aa13.42□□□□□ -0.26
Col9a1-201ENSMUST00000054588 SkilQ60665 675 aa13.42□□□□□ -0.26
Col9a1-201ENSMUST00000054588 Rsph4aQ8BYM7 716 aa13.42□□□□□ -0.26
Col9a1-201ENSMUST00000054588 Ttc21aQ8C0S4 1314 aa13.41□□□□□ -0.26
Col9a1-201ENSMUST00000054588 Rfx1P48377 963 aa13.41□□□□□ -0.26
Col9a1-201ENSMUST00000054588 Ankrd50F7BE84 1390 aa13.41□□□□□ -0.26
Col9a1-201ENSMUST00000054588 Klhdc4Q921I2 584 aa13.41□□□□□ -0.26
Col9a1-201ENSMUST00000054588 Arhgap23Q69ZH9 1483 aa13.4□□□□□ -0.26
Col9a1-201ENSMUST00000054588 Hecw2Q6I6G8 1578 aa13.4□□□□□ -0.26
Col9a1-201ENSMUST00000054588 AglF8VPN4 1532 aa13.4□□□□□ -0.26
Col9a1-201ENSMUST00000054588 Knl1Q66JQ7 1612 aa13.4□□□□□ -0.26
Col9a1-201ENSMUST00000054588 Evi5lH3BKQ3 813 aa13.4□□□□□ -0.26
Col9a1-201ENSMUST00000054588 Maco1Q7TQE6 664 aaKnown RBP13.4□□□□□ -0.26
Col9a1-201ENSMUST00000054588 Ric3Q8BPM6 367 aa13.4□□□□□ -0.26
Col9a1-201ENSMUST00000054588 Ift172Q6VH22 1749 aa13.39□□□□□ -0.27
Col9a1-201ENSMUST00000054588 Prrc2bQ7TPM1 1486 aaKnown RBP13.39□□□□□ -0.27
Col9a1-201ENSMUST00000054588 Znf541Q0GGX2 1363 aa13.38□□□□□ -0.27
Col9a1-201ENSMUST00000054588 Plcd4Q8K3R3 807 aa13.38□□□□□ -0.27
Col9a1-201ENSMUST00000054588 Kif18aQ91WD7 886 aa13.38□□□□□ -0.27
Col9a1-201ENSMUST00000054588 Uhrf1bp1B2KF50 1429 aa13.38□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 15.6 ms