RNA–Protein interactions for RNA: ENSMUST00000039021.10

Ssx2ip-201, Transcript of Afadin- and alpha-actinin-binding protein, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ssx2ip, Length 3,410 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx2ip-201ENSMUST00000039021 Gsto1O09131 240 aa23.25■■□□□ 1.31
Ssx2ip-201ENSMUST00000039021 Dmrtc1Q9D9R7 182 aa23.25■■□□□ 1.31
Ssx2ip-201ENSMUST00000039021 Abca17E9PX95 1733 aa23.25■■□□□ 1.31
Ssx2ip-201ENSMUST00000039021 NinlQ6ZQ12 1394 aa23.24■■□□□ 1.31
Ssx2ip-201ENSMUST00000039021 PalldQ9ET54 1408 aa23.24■■□□□ 1.31
Ssx2ip-201ENSMUST00000039021 Myom1Q62234 1667 aaKnown RBP23.24■■□□□ 1.31
Ssx2ip-201ENSMUST00000039021 Q4VA45 678 aa23.24■■□□□ 1.31
Ssx2ip-201ENSMUST00000039021 Phlpp2Q8BXA7 1320 aa23.23■■□□□ 1.31
Ssx2ip-201ENSMUST00000039021 Tmc1Q8R4P5 757 aa23.23■■□□□ 1.31
Ssx2ip-201ENSMUST00000039021 SkilQ60665 675 aa23.23■■□□□ 1.31
Ssx2ip-201ENSMUST00000039021 InsrP15208 1372 aa23.23■■□□□ 1.31
Ssx2ip-201ENSMUST00000039021 Zmym3Q9JLM4 1370 aa23.23■■□□□ 1.31
Ssx2ip-201ENSMUST00000039021 Talpid3E9PV87 1520 aa23.22■■□□□ 1.31
Ssx2ip-201ENSMUST00000039021 Efcab6Q6P1E8 1516 aa23.22■■□□□ 1.31
Ssx2ip-201ENSMUST00000039021 Cdk5rap2Q8K389 1822 aa23.22■■□□□ 1.31
Ssx2ip-201ENSMUST00000039021 Klhdc4Q921I2 584 aa23.21■■□□□ 1.31
Ssx2ip-201ENSMUST00000039021 Terf2O35144 541 aa23.21■■□□□ 1.31
Ssx2ip-201ENSMUST00000039021 Pdlim2Q8R1G6 349 aa23.21■■□□□ 1.31
Ssx2ip-201ENSMUST00000039021 Fgd1P52734 960 aa23.2■■□□□ 1.3
Ssx2ip-201ENSMUST00000039021 Q3UPC7 1272 aa23.2■■□□□ 1.3
Ssx2ip-201ENSMUST00000039021 Kiaa1210E9Q0C6 1637 aa23.2■■□□□ 1.3
Ssx2ip-201ENSMUST00000039021 SlkO54988 1233 aa23.2■■□□□ 1.3
Ssx2ip-201ENSMUST00000039021 Abca9Q8K449 1623 aa23.2■■□□□ 1.3
Ssx2ip-201ENSMUST00000039021 Kif2cQ922S8 721 aa23.2■■□□□ 1.3
Ssx2ip-201ENSMUST00000039021 Swt1Q9DBQ9 907 aa23.2■■□□□ 1.3
Ssx2ip-201ENSMUST00000039021 Nek4Q9Z1J2 792 aa23.2■■□□□ 1.3
Ssx2ip-201ENSMUST00000039021 Plekhm2Q80TQ5 1018 aa23.19■■□□□ 1.3
Ssx2ip-201ENSMUST00000039021 NgefQ8CHT1 710 aa23.19■■□□□ 1.3
Ssx2ip-201ENSMUST00000039021 Cabp2Q9JLK4 216 aa23.19■■□□□ 1.3
Ssx2ip-201ENSMUST00000039021 OvosQ3UU35 1456 aa23.18■■□□□ 1.3
Ssx2ip-201ENSMUST00000039021 Iqsec2Q5DU25 1478 aa23.18■■□□□ 1.3
Ssx2ip-201ENSMUST00000039021 Asxl2Q8BZ32 1370 aa23.18■■□□□ 1.3
Ssx2ip-201ENSMUST00000039021 Gli2Q0VGT2 1544 aa23.18■■□□□ 1.3
Ssx2ip-201ENSMUST00000039021 KnstrnQ9D9Z1 312 aaKnown RBP23.18■■□□□ 1.3
Ssx2ip-201ENSMUST00000039021 AU015836B2RUM3 263 aa23.17■■□□□ 1.3
Ssx2ip-201ENSMUST00000039021 Plppr3Q7TPB0 716 aa23.17■■□□□ 1.3
Ssx2ip-201ENSMUST00000039021 Prex1Q69ZK0 1650 aa23.17■■□□□ 1.3
Ssx2ip-201ENSMUST00000039021 Ankrd50F7BE84 1390 aa23.17■■□□□ 1.3
Ssx2ip-201ENSMUST00000039021 Il4rP16382 810 aa23.17■■□□□ 1.3
Ssx2ip-201ENSMUST00000039021 Cdc37l1Q9CZP7 335 aa23.17■■□□□ 1.3
Ssx2ip-201ENSMUST00000039021 Usp16Q99LG0 825 aa23.16■■□□□ 1.3
Ssx2ip-201ENSMUST00000039021 Antxr1Q9CZ52 562 aa23.16■■□□□ 1.3
Ssx2ip-201ENSMUST00000039021 Fndc1E9Q043 1732 aa23.16■■□□□ 1.3
Ssx2ip-201ENSMUST00000039021 Mcm4P49717 862 aa23.16■■□□□ 1.3
Ssx2ip-201ENSMUST00000039021 Slc52a2Q9D8F3 450 aa23.16■■□□□ 1.3
Ssx2ip-201ENSMUST00000039021 Chmp4cQ9D7F7 232 aa23.15■■□□□ 1.3
Ssx2ip-201ENSMUST00000039021 Cc2d1aQ8K1A6 943 aa23.14■■□□□ 1.29
Ssx2ip-201ENSMUST00000039021 Adgrb3Q80ZF8 1522 aa23.14■■□□□ 1.29
Ssx2ip-201ENSMUST00000039021 Triml2E9PW10 424 aa23.13■■□□□ 1.29
Ssx2ip-201ENSMUST00000039021 Skint5A7XUY5 1461 aa23.12■■□□□ 1.29
Ssx2ip-201ENSMUST00000039021 Afap1Q80YS6 731 aa23.11■■□□□ 1.29
Ssx2ip-201ENSMUST00000039021 Irx6Q9ER75 438 aa23.11■■□□□ 1.29
Ssx2ip-201ENSMUST00000039021 Brd1E9PZ26 1189 aaKnown RBP23.11■■□□□ 1.29
Ssx2ip-201ENSMUST00000039021 Ttc21aQ8C0S4 1314 aa23.1■■□□□ 1.29
Ssx2ip-201ENSMUST00000039021 Abca8aQ8K442 1620 aa23.1■■□□□ 1.29
Ssx2ip-201ENSMUST00000039021 Uggt1Q6P5E4 1551 aa23.1■■□□□ 1.29
Ssx2ip-201ENSMUST00000039021 Tbc1d9Q3UYK3 1264 aa23.08■■□□□ 1.29
Ssx2ip-201ENSMUST00000039021 Smarca5Q91ZW3 1051 aaKnown RBP23.08■■□□□ 1.29
Ssx2ip-201ENSMUST00000039021 Vamp4O70480 141 aa23.08■■□□□ 1.28
Ssx2ip-201ENSMUST00000039021 Ric3Q8BPM6 367 aa23.07■■□□□ 1.28
Ssx2ip-201ENSMUST00000039021 Nsd3Q6P2L6 1439 aa23.07■■□□□ 1.28
Ssx2ip-201ENSMUST00000039021 Prrc2bQ7TPM1 1486 aaKnown RBP23.06■■□□□ 1.28
Ssx2ip-201ENSMUST00000039021 MpripP97434 1024 aa23.06■■□□□ 1.28
Ssx2ip-201ENSMUST00000039021 Aldh1l1Q8R0Y6 902 aa23.06■■□□□ 1.28
Ssx2ip-201ENSMUST00000039021 Aifm3Q3TY86 605 aa23.06■■□□□ 1.28
Ssx2ip-201ENSMUST00000039021 Paxip1Q6NZQ4 1056 aa23.05■■□□□ 1.28
Ssx2ip-201ENSMUST00000039021 CarsQ9ER72 831 aaKnown RBP23.05■■□□□ 1.28
Ssx2ip-201ENSMUST00000039021 Ccdc171E9Q1U1 1324 aa23.05■■□□□ 1.28
Ssx2ip-201ENSMUST00000039021 MvpQ9EQK5 861 aa23.05■■□□□ 1.28
Ssx2ip-201ENSMUST00000039021 Wdr63B2RY71 923 aa23.04■■□□□ 1.28
Ssx2ip-201ENSMUST00000039021 CalcaP70160 136 aa23.04■■□□□ 1.28
Ssx2ip-201ENSMUST00000039021 Kcnn1Q9EQR3 537 aa23.03■■□□□ 1.28
Ssx2ip-201ENSMUST00000039021 Tmem131lQ3U3D7 1597 aa23.03■■□□□ 1.28
Ssx2ip-201ENSMUST00000039021 Cep170bQ80U49 1574 aa23.03■■□□□ 1.28
Ssx2ip-201ENSMUST00000039021 AampJ3QN89 436 aa23.02■■□□□ 1.28
Ssx2ip-201ENSMUST00000039021 Ehbp1l1Q99MS7 1716 aa23.01■■□□□ 1.27
Ssx2ip-201ENSMUST00000039021 FanclQ9CR14 375 aa23.01■■□□□ 1.27
Ssx2ip-201ENSMUST00000039021 Rsph3aQ3UFY4 516 aa23■■□□□ 1.27
Ssx2ip-201ENSMUST00000039021 KdrP35918 1367 aa22.99■■□□□ 1.27
Ssx2ip-201ENSMUST00000039021 DnmbpQ6TXD4 1580 aa22.99■■□□□ 1.27
Ssx2ip-201ENSMUST00000039021 Gnai1B2RSH2 354 aa22.99■■□□□ 1.27
Ssx2ip-201ENSMUST00000039021 Pabpn1Q8CCS6 302 aaKnown RBP22.99■■□□□ 1.27
Ssx2ip-201ENSMUST00000039021 Gnai3Q9DC51 354 aa22.99■■□□□ 1.27
Ssx2ip-201ENSMUST00000039021 Trim44Q9QXA7 346 aa22.99■■□□□ 1.27
Ssx2ip-201ENSMUST00000039021 Ankrd44B2RXR6 993 aa22.98■■□□□ 1.27
Ssx2ip-201ENSMUST00000039021 Yeats2Q3TUF7 1407 aa22.98■■□□□ 1.27
Ssx2ip-201ENSMUST00000039021 Ggnbp2Q5SV77 696 aa22.98■■□□□ 1.27
Ssx2ip-201ENSMUST00000039021 Trim27Q62158 513 aa22.98■■□□□ 1.27
Ssx2ip-201ENSMUST00000039021 FanciQ8K368 1330 aa22.98■■□□□ 1.27
Ssx2ip-201ENSMUST00000039021 Txndc2Q6P902 515 aa22.97■■□□□ 1.27
Ssx2ip-201ENSMUST00000039021 Sox12Q04890 314 aa22.96■■□□□ 1.27
Ssx2ip-201ENSMUST00000039021 Rtn4Q99P72 1162 aaKnown RBP22.96■■□□□ 1.27
Ssx2ip-201ENSMUST00000039021 Pdcl3Q8BVF2 240 aa22.96■■□□□ 1.27
Ssx2ip-201ENSMUST00000039021 Ddit3P35639 168 aa22.95■■□□□ 1.26
Ssx2ip-201ENSMUST00000039021 Eif4g2Q62448 906 aaKnown RBP22.95■■□□□ 1.26
Ssx2ip-201ENSMUST00000039021 Ppp1r18Q8BQ30 594 aa22.95■■□□□ 1.26
Ssx2ip-201ENSMUST00000039021 Map3k19E9Q3S4 1311 aa22.95■■□□□ 1.26
Ssx2ip-201ENSMUST00000039021 Psme1P97371 249 aa22.95■■□□□ 1.26
Ssx2ip-201ENSMUST00000039021 Ciz1Q8VEH2 845 aa22.95■■□□□ 1.26
Ssx2ip-201ENSMUST00000039021 Gm10093D3YYI8 482 aa22.94■■□□□ 1.26
Retrieved 100 of 22,080 RNA–protein pairs in 16.3 ms