RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Cavin4A2AMM0 362 aa12.12□□□□□ -0.47
Ldlr-201ENSMUST00000034713 Rfx1P48377 963 aa12.12□□□□□ -0.47
Ldlr-201ENSMUST00000034713 Nol10Q5RJG1 687 aaKnown RBP12.12□□□□□ -0.47
Ldlr-201ENSMUST00000034713 RalgapbQ8BQZ4 1484 aa12.11□□□□□ -0.47
Ldlr-201ENSMUST00000034713 Cpsf1Q9EPU4 1441 aaKnown RBP12.11□□□□□ -0.47
Ldlr-201ENSMUST00000034713 Kcnh8P59111 1102 aa12.11□□□□□ -0.47
Ldlr-201ENSMUST00000034713 Abcc6Q9R1S7 1498 aa12.11□□□□□ -0.47
Ldlr-201ENSMUST00000034713 Hfm1D3Z4R1 1434 aa12.11□□□□□ -0.47
Ldlr-201ENSMUST00000034713 1700010I14RikQ7TPG0 532 aa12.11□□□□□ -0.47
Ldlr-201ENSMUST00000034713 Tpm3-rs7D3Z2H9 248 aa12.1□□□□□ -0.47
Ldlr-201ENSMUST00000034713 Gm10471E9Q1C7 252 aa12.1□□□□□ -0.47
Ldlr-201ENSMUST00000034713 Zpr1Q62384 459 aa12.1□□□□□ -0.47
Ldlr-201ENSMUST00000034713 Idi2Q8BFZ6 227 aa12.1□□□□□ -0.47
Ldlr-201ENSMUST00000034713 SkilQ60665 675 aa12.1□□□□□ -0.47
Ldlr-201ENSMUST00000034713 ZgpatQ8VDM1 511 aa12.1□□□□□ -0.47
Ldlr-201ENSMUST00000034713 Gm21698A0A087WQP8 267 aa12.09□□□□□ -0.47
Ldlr-201ENSMUST00000034713 Gm21671G3UY31 267 aa12.09□□□□□ -0.47
Ldlr-201ENSMUST00000034713 Nap1l3Q794H2 544 aa12.09□□□□□ -0.47
Ldlr-201ENSMUST00000034713 Pank1Q8K4K6 548 aa12.09□□□□□ -0.47
Ldlr-201ENSMUST00000034713 Hoxa7P02830 229 aa12.09□□□□□ -0.47
Ldlr-201ENSMUST00000034713 Uggt2E9Q4X2 1504 aa12.09□□□□□ -0.47
Ldlr-201ENSMUST00000034713 Prrc2bQ7TPM1 1486 aaKnown RBP12.09□□□□□ -0.47
Ldlr-201ENSMUST00000034713 Ppip5k1A2ARP1 1436 aa12.08□□□□□ -0.48
Ldlr-201ENSMUST00000034713 Kif3aP28741 701 aa12.08□□□□□ -0.48
Ldlr-201ENSMUST00000034713 Fchsd2Q3USJ8 740 aa12.08□□□□□ -0.48
Ldlr-201ENSMUST00000034713 Naip6Q9JIB6 1403 aa12.08□□□□□ -0.48
Ldlr-201ENSMUST00000034713 EzrP26040 586 aaKnown RBP12.08□□□□□ -0.48
Ldlr-201ENSMUST00000034713 Kif20aP97329 887 aa12.08□□□□□ -0.48
Ldlr-201ENSMUST00000034713 Depdc5P61460 1591 aa12.08□□□□□ -0.48
Ldlr-201ENSMUST00000034713 Zranb3Q6NZP1 1069 aa12.08□□□□□ -0.48
Ldlr-201ENSMUST00000034713 TkfcQ8VC30 578 aa12.08□□□□□ -0.48
Ldlr-201ENSMUST00000034713 Usp16Q99LG0 825 aa12.08□□□□□ -0.48
Ldlr-201ENSMUST00000034713 Mroh2aD3Z750 1679 aa12.08□□□□□ -0.48
Ldlr-201ENSMUST00000034713 Tpm3P21107 285 aaKnown RBP12.07□□□□□ -0.48
Ldlr-201ENSMUST00000034713 Fbxo2Q80UW2 297 aa12.07□□□□□ -0.48
Ldlr-201ENSMUST00000034713 Kcnh5Q920E3 988 aa12.07□□□□□ -0.48
Ldlr-201ENSMUST00000034713 AlkP97793 1621 aa12.07□□□□□ -0.48
Ldlr-201ENSMUST00000034713 Efcab6Q6P1E8 1516 aa12.07□□□□□ -0.48
Ldlr-201ENSMUST00000034713 Anapc15P60007 132 aa12.07□□□□□ -0.48
Ldlr-201ENSMUST00000034713 Tnpo1Q8BFY9 898 aaKnown RBP12.07□□□□□ -0.48
Ldlr-201ENSMUST00000034713 Brpf1B2RRD7 1212 aa12.06□□□□□ -0.48
Ldlr-201ENSMUST00000034713 InsrP15208 1372 aa12.06□□□□□ -0.48
Ldlr-201ENSMUST00000034713 MpripP97434 1024 aa12.06□□□□□ -0.48
Ldlr-201ENSMUST00000034713 Plch2A2AP18 1501 aa12.06□□□□□ -0.48
Ldlr-201ENSMUST00000034713 Rbm25B2RY56 838 aaKnown RBP12.06□□□□□ -0.48
Ldlr-201ENSMUST00000034713 Plekhd1B2RPU2 505 aa12.06□□□□□ -0.48
Ldlr-201ENSMUST00000034713 Sh3bgrQ9WUZ7 214 aa12.06□□□□□ -0.48
Ldlr-201ENSMUST00000034713 Apaf1O88879 1249 aa12.05□□□□□ -0.48
Ldlr-201ENSMUST00000034713 Mug2P28666 1451 aa12.05□□□□□ -0.48
Ldlr-201ENSMUST00000034713 Hmgn5Q9JL35 406 aa12.05□□□□□ -0.48
Ldlr-201ENSMUST00000034713 Rnf17Q99MV7 1640 aa12.05□□□□□ -0.48
Ldlr-201ENSMUST00000034713 Sptbn5F6UCX4 1208 aa12.04□□□□□ -0.48
Ldlr-201ENSMUST00000034713 Fez1Q8K0X8 392 aa12.04□□□□□ -0.48
Ldlr-201ENSMUST00000034713 AatkQ80YE4 1365 aa12.04□□□□□ -0.48
Ldlr-201ENSMUST00000034713 Ppp1r15aP17564 657 aa12.04□□□□□ -0.48
Ldlr-201ENSMUST00000034713 Gpatch11Q3UFS4 262 aa12.04□□□□□ -0.48
Ldlr-201ENSMUST00000034713 Taf3Q5HZG4 932 aa12.04□□□□□ -0.48
Ldlr-201ENSMUST00000034713 Ddx54Q8K4L0 874 aaKnown RBP12.04□□□□□ -0.48
Ldlr-201ENSMUST00000034713 Ccer1Q9CQL2 403 aa12.04□□□□□ -0.48
Ldlr-201ENSMUST00000034713 L3mbtl2P59178 703 aa12.03□□□□□ -0.48
Ldlr-201ENSMUST00000034713 Tmem94Q7TSH8 1360 aa12.03□□□□□ -0.48
Ldlr-201ENSMUST00000034713 Atp10aO54827 1508 aa12.03□□□□□ -0.48
Ldlr-201ENSMUST00000034713 Kcna4Q61423 654 aa12.02□□□□□ -0.48
Ldlr-201ENSMUST00000034713 CrebrfQ8CDG5 640 aaKnown RBP12.02□□□□□ -0.48
Ldlr-201ENSMUST00000034713 Utp3Q9JI13 469 aaKnown RBP12.02□□□□□ -0.48
Ldlr-201ENSMUST00000034713 Zfyve16Q80U44 1528 aa12.02□□□□□ -0.48
Ldlr-201ENSMUST00000034713 Zkscan1Q8BGS3 561 aaKnown RBP12.02□□□□□ -0.49
Ldlr-201ENSMUST00000034713 Cchcr1Q8K2I2 770 aa12.02□□□□□ -0.49
Ldlr-201ENSMUST00000034713 Srek1Q8BZX4 494 aaKnown RBP12.02□□□□□ -0.49
Ldlr-201ENSMUST00000034713 Kdm6bQ5NCY0 1641 aa12.02□□□□□ -0.49
Ldlr-201ENSMUST00000034713 PalldQ9ET54 1408 aa12.01□□□□□ -0.49
Ldlr-201ENSMUST00000034713 GnpatP98192 678 aa12.01□□□□□ -0.49
Ldlr-201ENSMUST00000034713 Farp2Q91VS8 1065 aa12.01□□□□□ -0.49
Ldlr-201ENSMUST00000034713 TimelessQ9R1X4 1197 aa12.01□□□□□ -0.49
Ldlr-201ENSMUST00000034713 PalmQ9Z0P4 383 aa12.01□□□□□ -0.49
Ldlr-201ENSMUST00000034713 Sf3b2Q3UJB0 878 aaKnown RBP12.01□□□□□ -0.49
Ldlr-201ENSMUST00000034713 Usp54Q8BL06 1588 aaKnown RBP12.01□□□□□ -0.49
Ldlr-201ENSMUST00000034713 Triml2E9PW10 424 aa12.01□□□□□ -0.49
Ldlr-201ENSMUST00000034713 Hs1bp3Q3TC93 395 aa12.01□□□□□ -0.49
Ldlr-201ENSMUST00000034713 Ric3Q8BPM6 367 aa12.01□□□□□ -0.49
Ldlr-201ENSMUST00000034713 Cc2d1aQ8K1A6 943 aa12.01□□□□□ -0.49
Ldlr-201ENSMUST00000034713 Gcc1Q9D4H2 778 aa12.01□□□□□ -0.49
Ldlr-201ENSMUST00000034713 Nek4Q9Z1J2 792 aa12.01□□□□□ -0.49
Ldlr-201ENSMUST00000034713 Dusp27Q148W8 1138 aa12.01□□□□□ -0.49
Ldlr-201ENSMUST00000034713 Rnf20Q5DTM8 973 aa12.01□□□□□ -0.49
Ldlr-201ENSMUST00000034713 Smc4Q8CG47 1286 aa12.01□□□□□ -0.49
Ldlr-201ENSMUST00000034713 Q9D2X8 372 aa12.01□□□□□ -0.49
Ldlr-201ENSMUST00000034713 Edc4Q3UJB9 1406 aaKnown RBP12□□□□□ -0.49
Ldlr-201ENSMUST00000034713 Naip7Q9JIB3 1402 aa12□□□□□ -0.49
Ldlr-201ENSMUST00000034713 BccipQ9CWI3 316 aa12□□□□□ -0.49
Ldlr-201ENSMUST00000034713 SetQ9EQU5 289 aaKnown RBP12□□□□□ -0.49
Ldlr-201ENSMUST00000034713 Zeb2Q9R0G7 1215 aa12□□□□□ -0.49
Ldlr-201ENSMUST00000034713 Kank1E9Q238 1360 aa12□□□□□ -0.49
Ldlr-201ENSMUST00000034713 Dnai2A2AC93 623 aa12□□□□□ -0.49
Ldlr-201ENSMUST00000034713 Hoxb7P09024 217 aa12□□□□□ -0.49
Ldlr-201ENSMUST00000034713 Smc3Q9CW03 1217 aaKnown RBP12□□□□□ -0.49
Ldlr-201ENSMUST00000034713 Cdc42bpaQ3UU96 1719 aa12□□□□□ -0.49
Ldlr-201ENSMUST00000034713 Nos1Q9Z0J4 1429 aa11.99□□□□□ -0.49
Ldlr-201ENSMUST00000034713 NhsB1AV60 1647 aa11.99□□□□□ -0.49
Ldlr-201ENSMUST00000034713 Smc5Q8CG46 1101 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 12.3 ms