RNA–Protein interactions for RNA: ENSMUST00000031817.9

Herc6-201, Transcript of E3 ISG15--protein ligase Herc6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Herc6, Length 4,767 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Herc6-201ENSMUST00000031817 Gm21680A0A0G2JGR8 267 aa12.96□□□□□ -0.33
Herc6-201ENSMUST00000031817 Eva1cP58659 440 aa12.96□□□□□ -0.34
Herc6-201ENSMUST00000031817 Zkscan2G3X952 960 aa12.96□□□□□ -0.34
Herc6-201ENSMUST00000031817 Ccer1Q9CQL2 403 aa12.96□□□□□ -0.34
Herc6-201ENSMUST00000031817 ChgaP26339 463 aaKnown RBP12.95□□□□□ -0.34
Herc6-201ENSMUST00000031817 Ppm1fQ8CGA0 452 aa12.95□□□□□ -0.34
Herc6-201ENSMUST00000031817 Gm21663A0A0G2JE01 267 aa12.95□□□□□ -0.34
Herc6-201ENSMUST00000031817 Gm7361D3Z6R1 267 aa12.95□□□□□ -0.34
Herc6-201ENSMUST00000031817 5031410I06RikE9Q4E0 267 aa12.95□□□□□ -0.34
Herc6-201ENSMUST00000031817 Gm1979E9QAN3 267 aa12.95□□□□□ -0.34
Herc6-201ENSMUST00000031817 Gm5862K7N5V5 267 aa12.95□□□□□ -0.34
Herc6-201ENSMUST00000031817 Gm10220K7N660 267 aa12.95□□□□□ -0.34
Herc6-201ENSMUST00000031817 Glipr1l2Q9CQ35 332 aa12.95□□□□□ -0.34
Herc6-201ENSMUST00000031817 Evc2Q8K1G2 1220 aa12.95□□□□□ -0.34
Herc6-201ENSMUST00000031817 Larp1bA0A0A6YXJ7 370 aaKnown RBP12.94□□□□□ -0.34
Herc6-201ENSMUST00000031817 Hoxb7P09024 217 aa12.94□□□□□ -0.34
Herc6-201ENSMUST00000031817 Supt6hQ62383 1726 aaKnown RBP12.94□□□□□ -0.34
Herc6-201ENSMUST00000031817 Hmox1P14901 289 aa12.94□□□□□ -0.34
Herc6-201ENSMUST00000031817 Mre11Q61216 706 aa12.94□□□□□ -0.34
Herc6-201ENSMUST00000031817 Gcc1Q9D4H2 778 aa12.94□□□□□ -0.34
Herc6-201ENSMUST00000031817 Abcc2Q8VI47 1543 aa12.94□□□□□ -0.34
Herc6-201ENSMUST00000031817 Flad1Q8R123 492 aa12.94□□□□□ -0.34
Herc6-201ENSMUST00000031817 InsrP15208 1372 aa12.94□□□□□ -0.34
Herc6-201ENSMUST00000031817 PtprgQ05909 1442 aa12.94□□□□□ -0.34
Herc6-201ENSMUST00000031817 CrebrfQ8CDG5 640 aaKnown RBP12.94□□□□□ -0.34
Herc6-201ENSMUST00000031817 Adamts12Q811B3 1600 aa12.93□□□□□ -0.34
Herc6-201ENSMUST00000031817 Dhx16G3X8X0 1044 aaKnown RBP12.93□□□□□ -0.34
Herc6-201ENSMUST00000031817 Hap1O35668 628 aa12.93□□□□□ -0.34
Herc6-201ENSMUST00000031817 Dnttip2Q8R2M2 758 aaKnown RBP12.93□□□□□ -0.34
Herc6-201ENSMUST00000031817 Arhgef40Q3UPH7 1517 aa12.93□□□□□ -0.34
Herc6-201ENSMUST00000031817 TimelessQ9R1X4 1197 aa12.93□□□□□ -0.34
Herc6-201ENSMUST00000031817 CrcpO35427 148 aa12.93□□□□□ -0.34
Herc6-201ENSMUST00000031817 Srek1Q8BZX4 494 aaKnown RBP12.93□□□□□ -0.34
Herc6-201ENSMUST00000031817 Nphp1Q9QY53 687 aa12.93□□□□□ -0.34
Herc6-201ENSMUST00000031817 Ccdc183A2AJB1 534 aa12.93□□□□□ -0.34
Herc6-201ENSMUST00000031817 Ppp2r3aB2RXC8 1150 aa12.93□□□□□ -0.34
Herc6-201ENSMUST00000031817 Adgrb2Q8CGM1 1561 aa12.93□□□□□ -0.34
Herc6-201ENSMUST00000031817 Nap1l3Q794H2 544 aa12.92□□□□□ -0.34
Herc6-201ENSMUST00000031817 Erich6bQ9D4S6 220 aa12.92□□□□□ -0.34
Herc6-201ENSMUST00000031817 TnikP83510 1323 aa12.92□□□□□ -0.34
Herc6-201ENSMUST00000031817 Ggnbp2Q5SV77 696 aa12.92□□□□□ -0.34
Herc6-201ENSMUST00000031817 BcanQ61361 883 aa12.92□□□□□ -0.34
Herc6-201ENSMUST00000031817 Lrrc9Q8CDN9 1456 aa12.92□□□□□ -0.34
Herc6-201ENSMUST00000031817 KarsQ99MN1 595 aaKnown RBP12.92□□□□□ -0.34
Herc6-201ENSMUST00000031817 Naip6Q9JIB6 1403 aa12.92□□□□□ -0.34
Herc6-201ENSMUST00000031817 Gli2Q0VGT2 1544 aa12.91□□□□□ -0.34
Herc6-201ENSMUST00000031817 Btbd11Q6GQW0 1109 aa12.91□□□□□ -0.34
Herc6-201ENSMUST00000031817 Cchcr1Q8K2I2 770 aa12.91□□□□□ -0.34
Herc6-201ENSMUST00000031817 UvssaQ9D479 717 aa12.91□□□□□ -0.34
Herc6-201ENSMUST00000031817 Eif4g3Q80XI3 1579 aaKnown RBP12.91□□□□□ -0.34
Herc6-201ENSMUST00000031817 Cpsf1Q9EPU4 1441 aaKnown RBP12.91□□□□□ -0.34
Herc6-201ENSMUST00000031817 Ttll13A4Q9F6 804 aa12.91□□□□□ -0.34
Herc6-201ENSMUST00000031817 OptnQ8K3K8 584 aa12.91□□□□□ -0.34
Herc6-201ENSMUST00000031817 Nek4Q9Z1J2 792 aa12.91□□□□□ -0.34
Herc6-201ENSMUST00000031817 Lrriq1Q0P5X1 1673 aa12.91□□□□□ -0.34
Herc6-201ENSMUST00000031817 Znf518aB2RRF6 1478 aaKnown RBP12.9□□□□□ -0.34
Herc6-201ENSMUST00000031817 Tpd52l1O54818 204 aa12.9□□□□□ -0.34
Herc6-201ENSMUST00000031817 Nol11Q8BJW5 723 aaKnown RBP12.9□□□□□ -0.34
Herc6-201ENSMUST00000031817 Farp2Q91VS8 1065 aa12.9□□□□□ -0.34
Herc6-201ENSMUST00000031817 4933402E13RikQ9D4D2 429 aa12.9□□□□□ -0.34
Herc6-201ENSMUST00000031817 Zmym3Q9JLM4 1370 aa12.89□□□□□ -0.35
Herc6-201ENSMUST00000031817 Lmo7E9PYF4 1699 aaKnown RBP12.89□□□□□ -0.35
Herc6-201ENSMUST00000031817 GnpatP98192 678 aa12.89□□□□□ -0.35
Herc6-201ENSMUST00000031817 Hmgb2P30681 210 aaKnown RBP12.89□□□□□ -0.35
Herc6-201ENSMUST00000031817 AU015836B2RUM3 263 aa12.88□□□□□ -0.35
Herc6-201ENSMUST00000031817 Noc3lQ8VI84 807 aaKnown RBP12.88□□□□□ -0.35
Herc6-201ENSMUST00000031817 MvpQ9EQK5 861 aa12.88□□□□□ -0.35
Herc6-201ENSMUST00000031817 Abcc6Q9R1S7 1498 aa12.88□□□□□ -0.35
Herc6-201ENSMUST00000031817 Fmn2Q9JL04 1578 aa12.88□□□□□ -0.35
Herc6-201ENSMUST00000031817 Gm21969J3QJZ1 289 aa12.88□□□□□ -0.35
Herc6-201ENSMUST00000031817 Slc12a5Q91V14 1138 aa12.88□□□□□ -0.35
Herc6-201ENSMUST00000031817 Psma5Q9Z2U1 241 aaKnown RBP12.88□□□□□ -0.35
Herc6-201ENSMUST00000031817 NpatQ8BMA5 1420 aa12.88□□□□□ -0.35
Herc6-201ENSMUST00000031817 Arhgef11Q68FM7 1552 aa12.88□□□□□ -0.35
Herc6-201ENSMUST00000031817 Phactr2B1AVP0 632 aa12.88□□□□□ -0.35
Herc6-201ENSMUST00000031817 Cspp1B2RX88 1205 aa12.87□□□□□ -0.35
Herc6-201ENSMUST00000031817 Lmod3E9QA62 571 aa12.87□□□□□ -0.35
Herc6-201ENSMUST00000031817 Plcd4Q8K3R3 807 aa12.87□□□□□ -0.35
Herc6-201ENSMUST00000031817 Gcc2Q8CHG3 1679 aa12.87□□□□□ -0.35
Herc6-201ENSMUST00000031817 Naip7Q9JIB3 1402 aa12.87□□□□□ -0.35
Herc6-201ENSMUST00000031817 Elp1Q7TT37 1333 aaKnown RBP12.87□□□□□ -0.35
Herc6-201ENSMUST00000031817 Chrna2Q91X60 512 aa12.87□□□□□ -0.35
Herc6-201ENSMUST00000031817 Prl7d1P04769 244 aa12.86□□□□□ -0.35
Herc6-201ENSMUST00000031817 Aldh1l1Q8R0Y6 902 aa12.86□□□□□ -0.35
Herc6-201ENSMUST00000031817 Tomm22Q9CPQ3 142 aa12.86□□□□□ -0.35
Herc6-201ENSMUST00000031817 Rfx1P48377 963 aa12.86□□□□□ -0.35
Herc6-201ENSMUST00000031817 Sf3a1Q8K4Z5 791 aaKnown RBP12.86□□□□□ -0.35
Herc6-201ENSMUST00000031817 Smc3Q9CW03 1217 aaKnown RBP12.86□□□□□ -0.35
Herc6-201ENSMUST00000031817 Rapgef4Q9EQZ6 1011 aa12.86□□□□□ -0.35
Herc6-201ENSMUST00000031817 ApobrQ8VBT6 942 aa12.86□□□□□ -0.35
Herc6-201ENSMUST00000031817 Trim34aQ99PP6 485 aa12.86□□□□□ -0.35
Herc6-201ENSMUST00000031817 Frmpd2A0A140LI67 1392 aa12.86□□□□□ -0.35
Herc6-201ENSMUST00000031817 Irx3P81067 507 aa12.86□□□□□ -0.35
Herc6-201ENSMUST00000031817 Ccne1Q61457 408 aa12.86□□□□□ -0.35
Herc6-201ENSMUST00000031817 1700010I14RikQ7TPG0 532 aa12.86□□□□□ -0.35
Herc6-201ENSMUST00000031817 Rhot2Q8JZN7 620 aa12.86□□□□□ -0.35
Herc6-201ENSMUST00000031817 Trim34bJ3QNR8 485 aa12.85□□□□□ -0.35
Herc6-201ENSMUST00000031817 Ints3Q7TPD0 1041 aaKnown RBP12.85□□□□□ -0.35
Herc6-201ENSMUST00000031817 Adgrl3Q80TS3 1537 aa12.85□□□□□ -0.35
Herc6-201ENSMUST00000031817 Cwc27Q3TKY6 469 aa12.85□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 50.8 ms