RNA–Protein interactions for RNA: ENSMUST00000031628.9

Ptcd1-201, Transcript of Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptcd1, Length 3,087 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1-201ENSMUST00000031628 KarsQ99MN1 595 aaKnown RBP13.63□□□□□ -0.23
Ptcd1-201ENSMUST00000031628 Q9D9H8 365 aa13.63□□□□□ -0.23
Ptcd1-201ENSMUST00000031628 Sipa1l1Q8C0T5 1782 aa13.63□□□□□ -0.23
Ptcd1-201ENSMUST00000031628 Uggt1Q6P5E4 1551 aa13.63□□□□□ -0.23
Ptcd1-201ENSMUST00000031628 DnmbpQ6TXD4 1580 aa13.62□□□□□ -0.23
Ptcd1-201ENSMUST00000031628 Pnmal2G3X9N3 661 aa13.62□□□□□ -0.23
Ptcd1-201ENSMUST00000031628 Plin1Q8CGN5 517 aa13.62□□□□□ -0.23
Ptcd1-201ENSMUST00000031628 Nutm1Q8BHP2 1126 aa13.62□□□□□ -0.23
Ptcd1-201ENSMUST00000031628 Hfm1D3Z4R1 1434 aa13.62□□□□□ -0.23
Ptcd1-201ENSMUST00000031628 IbtkQ6ZPR6 1352 aaKnown RBP13.61□□□□□ -0.23
Ptcd1-201ENSMUST00000031628 Ttc41Q692V3 1318 aa13.61□□□□□ -0.23
Ptcd1-201ENSMUST00000031628 Gm6268A2A3U9 297 aa13.61□□□□□ -0.23
Ptcd1-201ENSMUST00000031628 Dusp27Q148W8 1138 aa13.61□□□□□ -0.23
Ptcd1-201ENSMUST00000031628 Trim58Q5NCC9 485 aa13.61□□□□□ -0.23
Ptcd1-201ENSMUST00000031628 Plxnc1Q9QZC2 1574 aa13.61□□□□□ -0.23
Ptcd1-201ENSMUST00000031628 CenpjQ569L8 1344 aa13.61□□□□□ -0.23
Ptcd1-201ENSMUST00000031628 Ipo8Q7TMY7 1010 aa13.6□□□□□ -0.23
Ptcd1-201ENSMUST00000031628 Slc52a2Q9D8F3 450 aa13.6□□□□□ -0.23
Ptcd1-201ENSMUST00000031628 Ccdc183A2AJB1 534 aa13.59□□□□□ -0.23
Ptcd1-201ENSMUST00000031628 Utp14aQ640M1 767 aaKnown RBP13.59□□□□□ -0.23
Ptcd1-201ENSMUST00000031628 Mapk8ip3Q9ESN9 1337 aa13.59□□□□□ -0.23
Ptcd1-201ENSMUST00000031628 NpatQ8BMA5 1420 aa13.59□□□□□ -0.23
Ptcd1-201ENSMUST00000031628 Ahdc1Q6PAL7 1594 aaKnown RBP13.59□□□□□ -0.23
Ptcd1-201ENSMUST00000031628 Scaf11E9PZM7 1456 aaKnown RBP13.58□□□□□ -0.23
Ptcd1-201ENSMUST00000031628 Nectin2P32507 530 aa13.58□□□□□ -0.23
Ptcd1-201ENSMUST00000031628 DekQ7TNV0 380 aaKnown RBP13.58□□□□□ -0.23
Ptcd1-201ENSMUST00000031628 Prrc2bQ7TPM1 1486 aaKnown RBP13.58□□□□□ -0.24
Ptcd1-201ENSMUST00000031628 Map4k4P97820 1233 aaKnown RBP13.58□□□□□ -0.24
Ptcd1-201ENSMUST00000031628 IbspQ61711 324 aa13.58□□□□□ -0.24
Ptcd1-201ENSMUST00000031628 Myom1Q62234 1667 aaKnown RBP13.58□□□□□ -0.24
Ptcd1-201ENSMUST00000031628 Lrrc7Q80TE7 1490 aa13.58□□□□□ -0.24
Ptcd1-201ENSMUST00000031628 Ppm1gQ61074 542 aa13.58□□□□□ -0.24
Ptcd1-201ENSMUST00000031628 Birc3O08863 600 aa13.57□□□□□ -0.24
Ptcd1-201ENSMUST00000031628 Qser1A2BIE1 1698 aa13.57□□□□□ -0.24
Ptcd1-201ENSMUST00000031628 PalldQ9ET54 1408 aa13.56□□□□□ -0.24
Ptcd1-201ENSMUST00000031628 Spryd3E9Q9B3 442 aa13.56□□□□□ -0.24
Ptcd1-201ENSMUST00000031628 Fam43aQ8BUP8 424 aa13.56□□□□□ -0.24
Ptcd1-201ENSMUST00000031628 PtprmP28828 1452 aa13.56□□□□□ -0.24
Ptcd1-201ENSMUST00000031628 Tmco5bQ80X59 307 aa13.56□□□□□ -0.24
Ptcd1-201ENSMUST00000031628 Atp2b2Q9R0K7 1198 aa13.55□□□□□ -0.24
Ptcd1-201ENSMUST00000031628 Arhgap23Q69ZH9 1483 aa13.55□□□□□ -0.24
Ptcd1-201ENSMUST00000031628 Ythdc1E9Q5K9 736 aaKnown RBP13.55□□□□□ -0.24
Ptcd1-201ENSMUST00000031628 Ccdc60Q8C4J0 545 aa13.55□□□□□ -0.24
Ptcd1-201ENSMUST00000031628 Gprasp1Q5U4C1 1347 aa13.55□□□□□ -0.24
Ptcd1-201ENSMUST00000031628 CltcQ68FD5 1675 aaKnown RBP13.55□□□□□ -0.24
Ptcd1-201ENSMUST00000031628 Ccar1Q8CH18 1146 aaKnown RBP13.54□□□□□ -0.24
Ptcd1-201ENSMUST00000031628 Asxl2Q8BZ32 1370 aa13.54□□□□□ -0.24
Ptcd1-201ENSMUST00000031628 Cdk19Q8BWD8 501 aa13.53□□□□□ -0.24
Ptcd1-201ENSMUST00000031628 Ift172Q6VH22 1749 aa13.53□□□□□ -0.24
Ptcd1-201ENSMUST00000031628 Pcdh10E9PXQ7 1057 aa13.53□□□□□ -0.24
Ptcd1-201ENSMUST00000031628 Aplp1Q03157 653 aa13.53□□□□□ -0.24
Ptcd1-201ENSMUST00000031628 Dnajc5gQ8C632 165 aa13.53□□□□□ -0.24
Ptcd1-201ENSMUST00000031628 Mfap1aC0HKD8 439 aaKnown RBP13.51□□□□□ -0.25
Ptcd1-201ENSMUST00000031628 Mfap1bC0HKD9 439 aaKnown RBP13.51□□□□□ -0.25
Ptcd1-201ENSMUST00000031628 Kif13aQ9EQW7 1749 aa13.51□□□□□ -0.25
Ptcd1-201ENSMUST00000031628 InsrP15208 1372 aa13.51□□□□□ -0.25
Ptcd1-201ENSMUST00000031628 Gsto1O09131 240 aa13.51□□□□□ -0.25
Ptcd1-201ENSMUST00000031628 Slc12a5Q91V14 1138 aa13.51□□□□□ -0.25
Ptcd1-201ENSMUST00000031628 Itsn1Q9Z0R4 1714 aa13.51□□□□□ -0.25
Ptcd1-201ENSMUST00000031628 MaddQ80U28 1577 aa13.5□□□□□ -0.25
Ptcd1-201ENSMUST00000031628 NinlQ6ZQ12 1394 aa13.5□□□□□ -0.25
Ptcd1-201ENSMUST00000031628 Rbm25B2RY56 838 aaKnown RBP13.5□□□□□ -0.25
Ptcd1-201ENSMUST00000031628 AU019823E9PUQ3 292 aa13.5□□□□□ -0.25
Ptcd1-201ENSMUST00000031628 Naip7Q9JIB3 1402 aa13.5□□□□□ -0.25
Ptcd1-201ENSMUST00000031628 Mre11Q61216 706 aa13.5□□□□□ -0.25
Ptcd1-201ENSMUST00000031628 PalmQ9Z0P4 383 aa13.5□□□□□ -0.25
Ptcd1-201ENSMUST00000031628 RictorQ6QI06 1708 aa13.49□□□□□ -0.25
Ptcd1-201ENSMUST00000031628 Mcm10Q0VBD2 885 aa13.49□□□□□ -0.25
Ptcd1-201ENSMUST00000031628 Nom1Q3UFM5 854 aaKnown RBP13.49□□□□□ -0.25
Ptcd1-201ENSMUST00000031628 Maco1Q7TQE6 664 aaKnown RBP13.49□□□□□ -0.25
Ptcd1-201ENSMUST00000031628 Ube2q2Q8K2Z8 378 aa13.48□□□□□ -0.25
Ptcd1-201ENSMUST00000031628 Ppp2r3aB2RXC8 1150 aa13.48□□□□□ -0.25
Ptcd1-201ENSMUST00000031628 Tnpo1Q8BFY9 898 aaKnown RBP13.48□□□□□ -0.25
Ptcd1-201ENSMUST00000031628 Ercc6l2Q9JIM3 1537 aa13.48□□□□□ -0.25
Ptcd1-201ENSMUST00000031628 Znf521Q6KAS7 1311 aa13.48□□□□□ -0.25
Ptcd1-201ENSMUST00000031628 1700019A02RikA0A087WPV9 146 aa13.47□□□□□ -0.25
Ptcd1-201ENSMUST00000031628 U2surpQ6NV83 1029 aaKnown RBP13.47□□□□□ -0.25
Ptcd1-201ENSMUST00000031628 Cep170bQ80U49 1574 aa13.47□□□□□ -0.25
Ptcd1-201ENSMUST00000031628 CastP51125 788 aa13.46□□□□□ -0.25
Ptcd1-201ENSMUST00000031628 Chmp4bQ9D8B3 224 aaKnown RBP13.46□□□□□ -0.25
Ptcd1-201ENSMUST00000031628 G3bp1P97855 465 aaKnown RBP13.45□□□□□ -0.26
Ptcd1-201ENSMUST00000031628 Ppp1r9bQ6R891 817 aaKnown RBP13.45□□□□□ -0.26
Ptcd1-201ENSMUST00000031628 Arhgef28P97433 1693 aa13.45□□□□□ -0.26
Ptcd1-201ENSMUST00000031628 Iqsec2Q5DU25 1478 aa13.44□□□□□ -0.26
Ptcd1-201ENSMUST00000031628 Tex2Q6ZPJ0 1128 aaKnown RBP13.44□□□□□ -0.26
Ptcd1-201ENSMUST00000031628 Cavin4A2AMM0 362 aa13.44□□□□□ -0.26
Ptcd1-201ENSMUST00000031628 Sox12Q04890 314 aa13.44□□□□□ -0.26
Ptcd1-201ENSMUST00000031628 Pibf1E9Q6K3 756 aa13.43□□□□□ -0.26
Ptcd1-201ENSMUST00000031628 Adamtsl3G3UXC7 1706 aa13.43□□□□□ -0.26
Ptcd1-201ENSMUST00000031628 Med14A2ABV5 1459 aaKnown RBP13.43□□□□□ -0.26
Ptcd1-201ENSMUST00000031628 Klhdc4Q921I2 584 aa13.42□□□□□ -0.26
Ptcd1-201ENSMUST00000031628 Dhx30Q99PU8 1217 aaKnown RBP13.42□□□□□ -0.26
Ptcd1-201ENSMUST00000031628 Cog6Q8R3I3 657 aa13.41□□□□□ -0.26
Ptcd1-201ENSMUST00000031628 Cabp2Q9JLK4 216 aa13.41□□□□□ -0.26
Ptcd1-201ENSMUST00000031628 Irf5P56477 497 aa13.41□□□□□ -0.26
Ptcd1-201ENSMUST00000031628 Txndc2Q6P902 515 aa13.41□□□□□ -0.26
Ptcd1-201ENSMUST00000031628 KdrP35918 1367 aa13.41□□□□□ -0.26
Ptcd1-201ENSMUST00000031628 Swt1Q9DBQ9 907 aa13.4□□□□□ -0.26
Ptcd1-201ENSMUST00000031628 Fam135bQ9DAI6 1403 aa13.4□□□□□ -0.26
Ptcd1-201ENSMUST00000031628 Zc3h13E9Q784 1729 aaKnown RBP13.4□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 39.9 ms