RNA–Protein interactions for RNA: ENSMUST00000030586.14

Ccdc28b-201, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28b, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-201ENSMUST00000030586 Ddx54Q8K4L0 874 aaKnown RBP15.93■□□□□ 0.14
Ccdc28b-201ENSMUST00000030586 TimelessQ9R1X4 1197 aa15.93■□□□□ 0.14
Ccdc28b-201ENSMUST00000030586 Tex14Q7M6U3 1450 aa15.92■□□□□ 0.14
Ccdc28b-201ENSMUST00000030586 Frmpd2A0A140LI67 1392 aa15.92■□□□□ 0.14
Ccdc28b-201ENSMUST00000030586 Marf1Q8BJ34 1730 aaKnown RBP15.92■□□□□ 0.14
Ccdc28b-201ENSMUST00000030586 Lrrc59Q922Q8 307 aaKnown RBP15.92■□□□□ 0.14
Ccdc28b-201ENSMUST00000030586 PaskQ8CEE6 1383 aa15.91■□□□□ 0.14
Ccdc28b-201ENSMUST00000030586 Abca15E9PWH4 1668 aa15.91■□□□□ 0.14
Ccdc28b-201ENSMUST00000030586 Znf335A2A5K6 1337 aa15.91■□□□□ 0.14
Ccdc28b-201ENSMUST00000030586 PtprvP70289 1705 aa15.9■□□□□ 0.14
Ccdc28b-201ENSMUST00000030586 Kif16bB1AVY7 1312 aa15.9■□□□□ 0.14
Ccdc28b-201ENSMUST00000030586 NinlQ6ZQ12 1394 aa15.89■□□□□ 0.13
Ccdc28b-201ENSMUST00000030586 Dzip1Q8BMD2 852 aa15.89■□□□□ 0.13
Ccdc28b-201ENSMUST00000030586 Cwc22Q8C5N3 908 aaKnown RBP15.89■□□□□ 0.13
Ccdc28b-201ENSMUST00000030586 Txnrd1Q9JMH6 613 aa15.89■□□□□ 0.13
Ccdc28b-201ENSMUST00000030586 Eno4Q8C042 619 aa15.88■□□□□ 0.13
Ccdc28b-201ENSMUST00000030586 Cdhr2E9Q7P9 1308 aa15.88■□□□□ 0.13
Ccdc28b-201ENSMUST00000030586 Slc4a1apE9PX68 744 aa15.87■□□□□ 0.13
Ccdc28b-201ENSMUST00000030586 Dmrt2Q8BG36 561 aa15.87■□□□□ 0.13
Ccdc28b-201ENSMUST00000030586 Emilin2Q8K482 1074 aa15.86■□□□□ 0.13
Ccdc28b-201ENSMUST00000030586 Zmym3Q9JLM4 1370 aa15.86■□□□□ 0.13
Ccdc28b-201ENSMUST00000030586 Bcl9lQ67FY2 1494 aa15.85■□□□□ 0.13
Ccdc28b-201ENSMUST00000030586 Ncoa4Q5U4H9 625 aa15.85■□□□□ 0.13
Ccdc28b-201ENSMUST00000030586 Nckap5lQ6GQX2 1323 aa15.85■□□□□ 0.13
Ccdc28b-201ENSMUST00000030586 Slc24a1Q91WD8 1130 aa15.83■□□□□ 0.12
Ccdc28b-201ENSMUST00000030586 Nlgn1Q99K10 843 aa15.83■□□□□ 0.12
Ccdc28b-201ENSMUST00000030586 Psrc1Q9D0P7 329 aa15.83■□□□□ 0.12
Ccdc28b-201ENSMUST00000030586 Kif7B7ZNG0 1348 aa15.82■□□□□ 0.12
Ccdc28b-201ENSMUST00000030586 Ncapd2Q8K2Z4 1392 aa15.82■□□□□ 0.12
Ccdc28b-201ENSMUST00000030586 Nid2O88322 1403 aa15.81■□□□□ 0.12
Ccdc28b-201ENSMUST00000030586 Gimap6Q8K349 305 aa15.81■□□□□ 0.12
Ccdc28b-201ENSMUST00000030586 Nfat5Q9WV30 1534 aa15.81■□□□□ 0.12
Ccdc28b-201ENSMUST00000030586 Tet3Q8BG87 1668 aa15.8■□□□□ 0.12
Ccdc28b-201ENSMUST00000030586 PrxO55103 1391 aa15.8■□□□□ 0.12
Ccdc28b-201ENSMUST00000030586 Fam184bQ0KK56 942 aa15.8■□□□□ 0.12
Ccdc28b-201ENSMUST00000030586 Prdm10Q3UTQ7 1184 aa15.8■□□□□ 0.12
Ccdc28b-201ENSMUST00000030586 Dennd6aQ8BH65 605 aa15.8■□□□□ 0.12
Ccdc28b-201ENSMUST00000030586 Gm21190A0A0G2JGJ6 266 aa15.79■□□□□ 0.12
Ccdc28b-201ENSMUST00000030586 InhbeO08717 350 aa15.79■□□□□ 0.12
Ccdc28b-201ENSMUST00000030586 Gm21698A0A087WQP8 267 aa15.78■□□□□ 0.12
Ccdc28b-201ENSMUST00000030586 Gm21671G3UY31 267 aa15.78■□□□□ 0.12
Ccdc28b-201ENSMUST00000030586 Pank3Q8R2W9 370 aa15.78■□□□□ 0.12
Ccdc28b-201ENSMUST00000030586 ZgpatQ8VDM1 511 aa15.78■□□□□ 0.12
Ccdc28b-201ENSMUST00000030586 Pard3Q99NH2 1333 aa15.77■□□□□ 0.12
Ccdc28b-201ENSMUST00000030586 Rtl5Q5DTT4 599 aa15.77■□□□□ 0.12
Ccdc28b-201ENSMUST00000030586 Astn2Q80Z10 1352 aa15.76■□□□□ 0.11
Ccdc28b-201ENSMUST00000030586 Las1lA2BE28 776 aaKnown RBP15.76■□□□□ 0.11
Ccdc28b-201ENSMUST00000030586 Sgsm1Q8BPQ7 1093 aa15.76■□□□□ 0.11
Ccdc28b-201ENSMUST00000030586 Dnajc10Q9DC23 793 aa15.76■□□□□ 0.11
Ccdc28b-201ENSMUST00000030586 Shank2Q80Z38 1476 aa15.76■□□□□ 0.11
Ccdc28b-201ENSMUST00000030586 Inpp5dQ9ES52 1191 aa15.75■□□□□ 0.11
Ccdc28b-201ENSMUST00000030586 Cdk12Q14AX6 1484 aaKnown RBP15.75■□□□□ 0.11
Ccdc28b-201ENSMUST00000030586 CemipQ8BI06 1361 aa15.75■□□□□ 0.11
Ccdc28b-201ENSMUST00000030586 Card10P58660 1021 aa15.73■□□□□ 0.11
Ccdc28b-201ENSMUST00000030586 Ccdc129Q14B48 1034 aa15.73■□□□□ 0.11
Ccdc28b-201ENSMUST00000030586 Plekhg5Q66T02 1073 aa15.73■□□□□ 0.11
Ccdc28b-201ENSMUST00000030586 Slx1bQ8BX32 270 aa15.73■□□□□ 0.11
Ccdc28b-201ENSMUST00000030586 Cabp4Q8VHC5 271 aa15.73■□□□□ 0.11
Ccdc28b-201ENSMUST00000030586 TnrQ8BYI9 1358 aa15.73■□□□□ 0.11
Ccdc28b-201ENSMUST00000030586 Tmf1B9EKI3 1091 aa15.72■□□□□ 0.11
Ccdc28b-201ENSMUST00000030586 Ano8Q6PB70 1060 aa15.72■□□□□ 0.11
Ccdc28b-201ENSMUST00000030586 Kcnh5Q920E3 988 aa15.72■□□□□ 0.11
Ccdc28b-201ENSMUST00000030586 HdgfP51859 237 aaKnown RBP15.71■□□□□ 0.11
Ccdc28b-201ENSMUST00000030586 Amotl2Q8K371 772 aa15.71■□□□□ 0.11
Ccdc28b-201ENSMUST00000030586 Rgs17Q9QZB0 210 aa15.71■□□□□ 0.11
Ccdc28b-201ENSMUST00000030586 MpndQ3TV65 487 aa15.7■□□□□ 0.1
Ccdc28b-201ENSMUST00000030586 FancaQ9JL70 1439 aa15.69■□□□□ 0.1
Ccdc28b-201ENSMUST00000030586 Tmem132eQ6IEE6 982 aa15.69■□□□□ 0.1
Ccdc28b-201ENSMUST00000030586 RgmbQ7TQ33 436 aa15.68■□□□□ 0.1
Ccdc28b-201ENSMUST00000030586 Dcaf11Q91VU6 549 aa15.68■□□□□ 0.1
Ccdc28b-201ENSMUST00000030586 Fmnl2A2APV2 1086 aa15.67■□□□□ 0.1
Ccdc28b-201ENSMUST00000030586 Sf3b2Q3UJB0 878 aaKnown RBP15.67■□□□□ 0.1
Ccdc28b-201ENSMUST00000030586 Zscan10Q3URR7 782 aa15.67■□□□□ 0.1
Ccdc28b-201ENSMUST00000030586 TatQ8QZR1 454 aa15.67■□□□□ 0.1
Ccdc28b-201ENSMUST00000030586 Smg6P61406 1418 aaKnown RBP15.67■□□□□ 0.1
Ccdc28b-201ENSMUST00000030586 Ubr1O70481 1757 aa15.67■□□□□ 0.1
Ccdc28b-201ENSMUST00000030586 Robo1O89026 1612 aa15.66■□□□□ 0.1
Ccdc28b-201ENSMUST00000030586 Aebp2Q9Z248 504 aaKnown RBP15.66■□□□□ 0.1
Ccdc28b-201ENSMUST00000030586 Tnrc6cQ3UHC0 1690 aaKnown RBP15.66■□□□□ 0.1
Ccdc28b-201ENSMUST00000030586 Gprasp1Q5U4C1 1347 aa15.66■□□□□ 0.1
Ccdc28b-201ENSMUST00000030586 Ltbp1Q8CG19 1712 aa15.65■□□□□ 0.1
Ccdc28b-201ENSMUST00000030586 Birc3O08863 600 aa15.65■□□□□ 0.1
Ccdc28b-201ENSMUST00000030586 Scaf1Q5U4C3 1256 aaKnown RBP15.63■□□□□ 0.09
Ccdc28b-201ENSMUST00000030586 Nol11Q8BJW5 723 aaKnown RBP15.63■□□□□ 0.09
Ccdc28b-201ENSMUST00000030586 Mdc1Q5PSV9 1707 aa15.63■□□□□ 0.09
Ccdc28b-201ENSMUST00000030586 IbtkQ6ZPR6 1352 aaKnown RBP15.62■□□□□ 0.09
Ccdc28b-201ENSMUST00000030586 Hoxc9P09633 260 aa15.62■□□□□ 0.09
Ccdc28b-201ENSMUST00000030586 Chd4Q6PDQ2 1915 aaKnown RBP15.62■□□□□ 0.09
Ccdc28b-201ENSMUST00000030586 Scn7aB1AYL1 1681 aa15.61■□□□□ 0.09
Ccdc28b-201ENSMUST00000030586 CrklP47941 303 aa15.61■□□□□ 0.09
Ccdc28b-201ENSMUST00000030586 ClspnQ80YR7 1315 aa15.61■□□□□ 0.09
Ccdc28b-201ENSMUST00000030586 Hoxb7P09024 217 aa15.6■□□□□ 0.09
Ccdc28b-201ENSMUST00000030586 OptnQ8K3K8 584 aa15.6■□□□□ 0.09
Ccdc28b-201ENSMUST00000030586 Pm20d1Q8C165 503 aa15.59■□□□□ 0.09
Ccdc28b-201ENSMUST00000030586 Nup153E9Q3G8 1462 aaKnown RBP15.59■□□□□ 0.09
Ccdc28b-201ENSMUST00000030586 Zeb2Q9R0G7 1215 aa15.58■□□□□ 0.08
Ccdc28b-201ENSMUST00000030586 Col15a1O35206 1367 aa15.57■□□□□ 0.08
Ccdc28b-201ENSMUST00000030586 Slit1Q80TR4 1531 aa15.57■□□□□ 0.08
Ccdc28b-201ENSMUST00000030586 Fer1l6E0CZ42 1862 aa15.56■□□□□ 0.08
Ccdc28b-201ENSMUST00000030586 Map2P20357 1828 aa15.55■□□□□ 0.08
Retrieved 100 of 22,080 RNA–protein pairs in 39.1 ms