RNA–Protein interactions for RNA: ENSMUST00000022225.11

Trim23-201, Transcript of E3 ubiquitin-protein ligase TRIM23, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim23, Length 3,416 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23-201ENSMUST00000022225 Tbc1d31Q6NXY1 996 aa15.24■□□□□ 0.03
Trim23-201ENSMUST00000022225 GsdmaQ9EST1 446 aa15.24■□□□□ 0.03
Trim23-201ENSMUST00000022225 Cbx1P83917 185 aaKnown RBP15.24■□□□□ 0.03
Trim23-201ENSMUST00000022225 Zkscan1Q8BGS3 561 aaKnown RBP15.24■□□□□ 0.03
Trim23-201ENSMUST00000022225 GorabQ8BRM2 368 aa15.24■□□□□ 0.03
Trim23-201ENSMUST00000022225 Wdr63B2RY71 923 aa15.24■□□□□ 0.03
Trim23-201ENSMUST00000022225 Rbm27Q5SFM8 1060 aaKnown RBP15.23■□□□□ 0.03
Trim23-201ENSMUST00000022225 Maco1Q7TQE6 664 aaKnown RBP15.23■□□□□ 0.03
Trim23-201ENSMUST00000022225 Atp2b3Q0VF55 1220 aa15.23■□□□□ 0.03
Trim23-201ENSMUST00000022225 Ncbp1Q3UYV9 790 aaKnown RBP15.23■□□□□ 0.03
Trim23-201ENSMUST00000022225 Ncbp3Q8BZR9 615 aaKnown RBP15.23■□□□□ 0.03
Trim23-201ENSMUST00000022225 Zfyve16Q80U44 1528 aa15.23■□□□□ 0.03
Trim23-201ENSMUST00000022225 AI481877A2ALV5 1481 aa15.23■□□□□ 0.03
Trim23-201ENSMUST00000022225 Gm45140A0A0N4SUM8 220 aa15.22■□□□□ 0.03
Trim23-201ENSMUST00000022225 Tmem132aQ922P8 1018 aa15.22■□□□□ 0.03
Trim23-201ENSMUST00000022225 Mast1Q9R1L5 1570 aa15.22■□□□□ 0.03
Trim23-201ENSMUST00000022225 Robo2Q7TPD3 1470 aa15.22■□□□□ 0.03
Trim23-201ENSMUST00000022225 Adgrl3Q80TS3 1537 aa15.22■□□□□ 0.03
Trim23-201ENSMUST00000022225 Syce3B5KM66 88 aa15.21■□□□□ 0.03
Trim23-201ENSMUST00000022225 FanciQ8K368 1330 aa15.21■□□□□ 0.03
Trim23-201ENSMUST00000022225 Kdm2aP59997 1161 aa15.21■□□□□ 0.03
Trim23-201ENSMUST00000022225 Setd1bQ8CFT2 1985 aa15.21■□□□□ 0.03
Trim23-201ENSMUST00000022225 Zhx1P70121 873 aa15.21■□□□□ 0.02
Trim23-201ENSMUST00000022225 Abcc2Q8VI47 1543 aa15.2■□□□□ 0.02
Trim23-201ENSMUST00000022225 Wwc1Q5SXA9 1104 aa15.2■□□□□ 0.02
Trim23-201ENSMUST00000022225 Plppr3Q7TPB0 716 aa15.2■□□□□ 0.02
Trim23-201ENSMUST00000022225 Apaf1O88879 1249 aa15.2■□□□□ 0.02
Trim23-201ENSMUST00000022225 Fam208aQ69ZR9 1610 aaKnown RBP15.2■□□□□ 0.02
Trim23-201ENSMUST00000022225 Zdhhc9P59268 364 aa15.2■□□□□ 0.02
Trim23-201ENSMUST00000022225 Cetn4Q8K4K1 168 aa15.2■□□□□ 0.02
Trim23-201ENSMUST00000022225 Nek4Q9Z1J2 792 aa15.2■□□□□ 0.02
Trim23-201ENSMUST00000022225 Zfp251Q6PCX8 632 aa15.19■□□□□ 0.02
Trim23-201ENSMUST00000022225 Ptgs1P22437 602 aa15.18■□□□□ 0.02
Trim23-201ENSMUST00000022225 LifrP42703 1092 aa15.18■□□□□ 0.02
Trim23-201ENSMUST00000022225 Rnf214Q8BFU3 668 aaKnown RBP15.18■□□□□ 0.02
Trim23-201ENSMUST00000022225 Scaf11E9PZM7 1456 aaKnown RBP15.18■□□□□ 0.02
Trim23-201ENSMUST00000022225 Abcc6Q9R1S7 1498 aa15.18■□□□□ 0.02
Trim23-201ENSMUST00000022225 CastP51125 788 aa15.17■□□□□ 0.02
Trim23-201ENSMUST00000022225 Znf330Q922H9 316 aa15.17■□□□□ 0.02
Trim23-201ENSMUST00000022225 Neurl4Q5NCX5 1563 aa15.16■□□□□ 0.02
Trim23-201ENSMUST00000022225 Glipr1l2Q9CQ35 332 aa15.16■□□□□ 0.02
Trim23-201ENSMUST00000022225 Gtf2e1Q9D0D5 440 aa15.16■□□□□ 0.02
Trim23-201ENSMUST00000022225 Bach2P97303 839 aa15.16■□□□□ 0.02
Trim23-201ENSMUST00000022225 Gripap1Q8VD04 806 aa15.16■□□□□ 0.02
Trim23-201ENSMUST00000022225 Rbm42Q91V81 474 aaKnown RBP15.16■□□□□ 0.02
Trim23-201ENSMUST00000022225 Abca9Q8K449 1623 aa15.16■□□□□ 0.02
Trim23-201ENSMUST00000022225 Hecw1Q8K4P8 1604 aa15.16■□□□□ 0.02
Trim23-201ENSMUST00000022225 Adgrl1Q80TR1 1466 aa15.16■□□□□ 0.02
Trim23-201ENSMUST00000022225 Chd1lQ9CXF7 900 aa15.15■□□□□ 0.02
Trim23-201ENSMUST00000022225 Talpid3E9PV87 1520 aa15.15■□□□□ 0.02
Trim23-201ENSMUST00000022225 Naip7Q9JIB3 1402 aa15.15■□□□□ 0.02
Trim23-201ENSMUST00000022225 Uggt2E9Q4X2 1504 aa15.15■□□□□ 0.02
Trim23-201ENSMUST00000022225 Hfm1D3Z4R1 1434 aa15.15■□□□□ 0.02
Trim23-201ENSMUST00000022225 PtmsQ9D0J8 101 aaKnown RBP15.15■□□□□ 0.02
Trim23-201ENSMUST00000022225 Tshz2Q68FE9 1030 aa15.14■□□□□ 0.01
Trim23-201ENSMUST00000022225 Cep152A2AUM9 1736 aaKnown RBP15.14■□□□□ 0.01
Trim23-201ENSMUST00000022225 Kif4P33174 1231 aa15.14■□□□□ 0.01
Trim23-201ENSMUST00000022225 Prdm10Q3UTQ7 1184 aa15.14■□□□□ 0.01
Trim23-201ENSMUST00000022225 Fam114a1Q9D281 569 aa15.14■□□□□ 0.01
Trim23-201ENSMUST00000022225 Ttc37F8VPK0 1563 aa15.14■□□□□ 0.01
Trim23-201ENSMUST00000022225 Ccdc173A0JLY1 547 aa15.14■□□□□ 0.01
Trim23-201ENSMUST00000022225 Nfatc2ipO09130 412 aa15.13■□□□□ 0.01
Trim23-201ENSMUST00000022225 Cavin1O54724 392 aa15.13■□□□□ 0.01
Trim23-201ENSMUST00000022225 Stk11ipQ3TAA7 1072 aa15.13■□□□□ 0.01
Trim23-201ENSMUST00000022225 MpndQ3TV65 487 aa15.13■□□□□ 0.01
Trim23-201ENSMUST00000022225 Irx4Q9QY61 515 aa15.13■□□□□ 0.01
Trim23-201ENSMUST00000022225 Abcc1O35379 1528 aa15.13■□□□□ 0.01
Trim23-201ENSMUST00000022225 Gm32742A0A1B0GT42 1604 aa15.13■□□□□ 0.01
Trim23-201ENSMUST00000022225 Lmod3E9QA62 571 aa15.13■□□□□ 0.01
Trim23-201ENSMUST00000022225 Gtpbp6Q3U6U5 514 aa15.13■□□□□ 0.01
Trim23-201ENSMUST00000022225 Cald1E9QA15 768 aaKnown RBP15.13■□□□□ 0.01
Trim23-201ENSMUST00000022225 Gadd45bP22339 160 aa15.13■□□□□ 0.01
Trim23-201ENSMUST00000022225 CenppQ9CZ92 286 aa15.13■□□□□ 0.01
Trim23-201ENSMUST00000022225 Anapc15-psA0A140T8L6 141 aa15.12■□□□□ 0.01
Trim23-201ENSMUST00000022225 Ppip5k2Q6ZQB6 1129 aa15.12■□□□□ 0.01
Trim23-201ENSMUST00000022225 Hecw2Q6I6G8 1578 aa15.12■□□□□ 0.01
Trim23-201ENSMUST00000022225 Gm20521D3Z5F7 333 aa15.12■□□□□ 0.01
Trim23-201ENSMUST00000022225 Cyp27a1Q9DBG1 533 aa15.12■□□□□ 0.01
Trim23-201ENSMUST00000022225 Ccdc60Q8C4J0 545 aa15.11■□□□□ 0.01
Trim23-201ENSMUST00000022225 Ttc21aQ8C0S4 1314 aa15.11■□□□□ 0.01
Trim23-201ENSMUST00000022225 Ccdc146E9Q9F7 977 aa15.11■□□□□ 0.01
Trim23-201ENSMUST00000022225 Pde4cQ3UEI1 686 aa15.11■□□□□ 0.01
Trim23-201ENSMUST00000022225 Tbc1d30Q69ZT9 766 aa15.11■□□□□ 0.01
Trim23-201ENSMUST00000022225 Hvcn1Q3U2S8 269 aa15.11■□□□□ 0.01
Trim23-201ENSMUST00000022225 Gdpd2Q9ESM6 539 aa15.11■□□□□ 0.01
Trim23-201ENSMUST00000022225 Nutm1Q8BHP2 1126 aa15.1■□□□□ 0.01
Trim23-201ENSMUST00000022225 Usp40Q8BWR4 1235 aa15.1■□□□□ 0.01
Trim23-201ENSMUST00000022225 U2af1Q9D883 239 aaKnown RBP15.1■□□□□ 0.01
Trim23-201ENSMUST00000022225 Olfml1Q8BSH2 233 aa15.1■□□□□ 0.01
Trim23-201ENSMUST00000022225 Serpina10Q8R121 448 aa15.1■□□□□ 0.01
Trim23-201ENSMUST00000022225 Sox12Q04890 314 aa15.1■□□□□ 0.01
Trim23-201ENSMUST00000022225 CarsQ9ER72 831 aaKnown RBP15.1■□□□□ 0.01
Trim23-201ENSMUST00000022225 Zcchc11B2RX14 1644 aaKnown RBP15.09■□□□□ 0.01
Trim23-201ENSMUST00000022225 ErbinQ80TH2 1402 aa15.09■□□□□ 0.01
Trim23-201ENSMUST00000022225 Ankrd50F7BE84 1390 aa15.09■□□□□ 0.01
Trim23-201ENSMUST00000022225 Ccdc171E9Q1U1 1324 aa15.09■□□□□ 0.01
Trim23-201ENSMUST00000022225 Dync1i1O88485 628 aa15.09■□□□□ 0.01
Trim23-201ENSMUST00000022225 Ercc6lQ8BHK9 1240 aa15.09■□□□□ 0.01
Trim23-201ENSMUST00000022225 Abca8bQ8K440 1620 aa15.09■□□□□ 0.01
Trim23-201ENSMUST00000022225 Sall3Q62255 1320 aa15.09■□□□□ 0.01
Retrieved 100 of 22,080 RNA–protein pairs in 15.2 ms