RNA–Protein interactions for RNA: ENSMUST00000005503.3

Msh6-201, Transcript of DNA mismatch repair protein Msh6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Msh6, Length 4,254 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6-201ENSMUST00000005503 Fez1Q8K0X8 392 aa15.38■□□□□ 0.05
Msh6-201ENSMUST00000005503 Pde3bQ61409 1100 aa15.37■□□□□ 0.05
Msh6-201ENSMUST00000005503 Fam13bQ8K2H3 851 aa15.37■□□□□ 0.05
Msh6-201ENSMUST00000005503 Mical1Q8VDP3 1048 aa15.37■□□□□ 0.05
Msh6-201ENSMUST00000005503 Il4rP16382 810 aa15.37■□□□□ 0.05
Msh6-201ENSMUST00000005503 Anapc15P60007 132 aa15.37■□□□□ 0.05
Msh6-201ENSMUST00000005503 R3hcc1Q8BSI6 488 aa15.37■□□□□ 0.05
Msh6-201ENSMUST00000005503 Rab11fip3Q8CHD8 1047 aa15.37■□□□□ 0.05
Msh6-201ENSMUST00000005503 Mlh3A0A1Y7VMP7 1443 aa15.37■□□□□ 0.05
Msh6-201ENSMUST00000005503 AU019823E9PUQ3 292 aa15.37■□□□□ 0.05
Msh6-201ENSMUST00000005503 Aldh1l1Q8R0Y6 902 aa15.37■□□□□ 0.05
Msh6-201ENSMUST00000005503 Gprasp1Q5U4C1 1347 aa15.37■□□□□ 0.05
Msh6-201ENSMUST00000005503 Lmtk2Q3TYD6 1471 aa15.37■□□□□ 0.05
Msh6-201ENSMUST00000005503 Mcm2P97310 904 aa15.37■□□□□ 0.05
Msh6-201ENSMUST00000005503 Erc2Q6PH08 957 aa15.36■□□□□ 0.05
Msh6-201ENSMUST00000005503 Ccer1Q9CQL2 403 aa15.36■□□□□ 0.05
Msh6-201ENSMUST00000005503 Pla2r1Q62028 1487 aa15.36■□□□□ 0.05
Msh6-201ENSMUST00000005503 Zkscan2G3X952 960 aa15.36■□□□□ 0.05
Msh6-201ENSMUST00000005503 Gcc1Q9D4H2 778 aa15.36■□□□□ 0.05
Msh6-201ENSMUST00000005503 Cfdp1O88271 295 aaKnown RBP15.36■□□□□ 0.05
Msh6-201ENSMUST00000005503 CastP51125 788 aa15.36■□□□□ 0.05
Msh6-201ENSMUST00000005503 Bcl2l13P59017 434 aa15.36■□□□□ 0.05
Msh6-201ENSMUST00000005503 Arhgef12Q8R4H2 1543 aaKnown RBP15.36■□□□□ 0.05
Msh6-201ENSMUST00000005503 NexnQ7TPW1 607 aa15.35■□□□□ 0.05
Msh6-201ENSMUST00000005503 Slc12a5Q91V14 1138 aa15.35■□□□□ 0.05
Msh6-201ENSMUST00000005503 Bicd2Q921C5 820 aa15.35■□□□□ 0.05
Msh6-201ENSMUST00000005503 DroshaQ5HZJ0 1373 aaKnown RBP15.35■□□□□ 0.05
Msh6-201ENSMUST00000005503 Dixdc1Q80Y83 711 aa15.35■□□□□ 0.05
Msh6-201ENSMUST00000005503 Lmo7E9PYF4 1699 aaKnown RBP15.35■□□□□ 0.05
Msh6-201ENSMUST00000005503 Chmp3Q9CQ10 224 aa15.34■□□□□ 0.05
Msh6-201ENSMUST00000005503 Ppp1r3fQ9JIG4 799 aa15.34■□□□□ 0.05
Msh6-201ENSMUST00000005503 Bag4Q8CI61 457 aa15.34■□□□□ 0.05
Msh6-201ENSMUST00000005503 Tmc1Q8R4P5 757 aa15.34■□□□□ 0.05
Msh6-201ENSMUST00000005503 Trappc8E9PWG2 1437 aa15.34■□□□□ 0.05
Msh6-201ENSMUST00000005503 Rasa1E9PYG6 1038 aa15.34■□□□□ 0.05
Msh6-201ENSMUST00000005503 Cwc27Q3TKY6 469 aa15.33■□□□□ 0.04
Msh6-201ENSMUST00000005503 Mcm10Q0VBD2 885 aa15.32■□□□□ 0.04
Msh6-201ENSMUST00000005503 Nphp1Q9QY53 687 aa15.32■□□□□ 0.04
Msh6-201ENSMUST00000005503 Cpsf1Q9EPU4 1441 aaKnown RBP15.32■□□□□ 0.04
Msh6-201ENSMUST00000005503 FanciQ8K368 1330 aa15.32■□□□□ 0.04
Msh6-201ENSMUST00000005503 Fgd6Q69ZL1 1399 aa15.32■□□□□ 0.04
Msh6-201ENSMUST00000005503 Fmnl2A2APV2 1086 aa15.32■□□□□ 0.04
Msh6-201ENSMUST00000005503 Wdr63B2RY71 923 aa15.32■□□□□ 0.04
Msh6-201ENSMUST00000005503 Atf7ipQ7TT18 1306 aa15.32■□□□□ 0.04
Msh6-201ENSMUST00000005503 Srgap3Q812A2 1099 aa15.32■□□□□ 0.04
Msh6-201ENSMUST00000005503 Gm14025A2AP89 1413 aa15.31■□□□□ 0.04
Msh6-201ENSMUST00000005503 Sytl4Q9R0Q1 673 aa15.31■□□□□ 0.04
Msh6-201ENSMUST00000005503 WizO88286 1684 aaKnown RBP15.31■□□□□ 0.04
Msh6-201ENSMUST00000005503 Kdm3bQ6ZPY7 1562 aa15.31■□□□□ 0.04
Msh6-201ENSMUST00000005503 Ccdc173A0JLY1 547 aa15.31■□□□□ 0.04
Msh6-201ENSMUST00000005503 Wwc1Q5SXA9 1104 aa15.3■□□□□ 0.04
Msh6-201ENSMUST00000005503 Ssh2Q5SW75 1423 aa15.3■□□□□ 0.04
Msh6-201ENSMUST00000005503 Znf326O88291 580 aa15.3■□□□□ 0.04
Msh6-201ENSMUST00000005503 Rbm27Q5SFM8 1060 aaKnown RBP15.3■□□□□ 0.04
Msh6-201ENSMUST00000005503 Ap3b2Q9JME5 1082 aa15.3■□□□□ 0.04
Msh6-201ENSMUST00000005503 Peg3Q3URU2 1571 aa15.3■□□□□ 0.04
Msh6-201ENSMUST00000005503 Gnai2P08752 355 aaKnown RBP15.3■□□□□ 0.04
Msh6-201ENSMUST00000005503 Prkar2bP31324 416 aa15.3■□□□□ 0.04
Msh6-201ENSMUST00000005503 Caskin1Q6P9K8 1431 aa15.29■□□□□ 0.04
Msh6-201ENSMUST00000005503 Larp1bA0A0A6YXJ7 370 aaKnown RBP15.29■□□□□ 0.04
Msh6-201ENSMUST00000005503 Ints3Q7TPD0 1041 aaKnown RBP15.29■□□□□ 0.04
Msh6-201ENSMUST00000005503 TnikP83510 1323 aa15.29■□□□□ 0.04
Msh6-201ENSMUST00000005503 AppP12023 770 aa15.29■□□□□ 0.04
Msh6-201ENSMUST00000005503 Klhdc4Q921I2 584 aa15.28■□□□□ 0.04
Msh6-201ENSMUST00000005503 Neurod6P48986 337 aa15.28■□□□□ 0.04
Msh6-201ENSMUST00000005503 AnlnQ8K298 1121 aaKnown RBP15.28■□□□□ 0.04
Msh6-201ENSMUST00000005503 Hs1bp3Q3TC93 395 aa15.27■□□□□ 0.04
Msh6-201ENSMUST00000005503 Samm50Q8BGH2 469 aa15.27■□□□□ 0.04
Msh6-201ENSMUST00000005503 FanclQ9CR14 375 aa15.27■□□□□ 0.04
Msh6-201ENSMUST00000005503 Tshz3Q8CGV9 1081 aa15.27■□□□□ 0.03
Msh6-201ENSMUST00000005503 4931400O07RikQ9D4M5 137 aa15.27■□□□□ 0.03
Msh6-201ENSMUST00000005503 Rcan3Q9JKK0 239 aa15.27■□□□□ 0.03
Msh6-201ENSMUST00000005503 Cnnm3Q32NY4 713 aa15.26■□□□□ 0.03
Msh6-201ENSMUST00000005503 Fchsd2Q3USJ8 740 aa15.26■□□□□ 0.03
Msh6-201ENSMUST00000005503 Prex2Q3LAC4 1598 aa15.26■□□□□ 0.03
Msh6-201ENSMUST00000005503 Bcar3Q9QZK2 820 aa15.26■□□□□ 0.03
Msh6-201ENSMUST00000005503 Brd1E9PZ26 1189 aaKnown RBP15.26■□□□□ 0.03
Msh6-201ENSMUST00000005503 Ptpdc1Q6NZK8 747 aa15.26■□□□□ 0.03
Msh6-201ENSMUST00000005503 Frmd3Q8BHD4 595 aa15.26■□□□□ 0.03
Msh6-201ENSMUST00000005503 Pof1bQ8K4L4 587 aa15.26■□□□□ 0.03
Msh6-201ENSMUST00000005503 Pprc1Q6NZN1 1644 aa15.26■□□□□ 0.03
Msh6-201ENSMUST00000005503 KdrP35918 1367 aa15.25■□□□□ 0.03
Msh6-201ENSMUST00000005503 Mphosph10Q810V0 681 aaKnown RBP15.25■□□□□ 0.03
Msh6-201ENSMUST00000005503 Hnrnpul1Q8VDM6 859 aaKnown RBP15.25■□□□□ 0.03
Msh6-201ENSMUST00000005503 Ankrd44B2RXR6 993 aa15.25■□□□□ 0.03
Msh6-201ENSMUST00000005503 Kif3aP28741 701 aa15.25■□□□□ 0.03
Msh6-201ENSMUST00000005503 Bloc1s4Q8VED2 215 aa15.25■□□□□ 0.03
Msh6-201ENSMUST00000005503 Gm10093D3YYI8 482 aa15.25■□□□□ 0.03
Msh6-201ENSMUST00000005503 Hdac1O09106 482 aaKnown RBP15.25■□□□□ 0.03
Msh6-201ENSMUST00000005503 Map3k13Q1HKZ5 959 aa15.25■□□□□ 0.03
Msh6-201ENSMUST00000005503 Disp1Q3TDN0 1521 aa15.25■□□□□ 0.03
Msh6-201ENSMUST00000005503 EzrP26040 586 aaKnown RBP15.24■□□□□ 0.03
Msh6-201ENSMUST00000005503 CalcaP70160 136 aa15.24■□□□□ 0.03
Msh6-201ENSMUST00000005503 Adcy10Q8C0T9 1614 aa15.24■□□□□ 0.03
Msh6-201ENSMUST00000005503 Mcm3P25206 812 aaKnown RBP15.24■□□□□ 0.03
Msh6-201ENSMUST00000005503 Taf3Q5HZG4 932 aa15.24■□□□□ 0.03
Msh6-201ENSMUST00000005503 TmpoQ61033 693 aaKnown RBP15.24■□□□□ 0.03
Msh6-201ENSMUST00000005503 Zbtb22Q9Z0G7 638 aa15.24■□□□□ 0.03
Msh6-201ENSMUST00000005503 Calcoco2A2A6M5 331 aa15.24■□□□□ 0.03
Msh6-201ENSMUST00000005503 Ddx11Q6AXC6 880 aa15.24■□□□□ 0.03
Retrieved 100 of 22,080 RNA–protein pairs in 13.3 ms