RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 TMEM115Q12893 351 aaPredicted RBP4.66□□□□□ -1.66
CD44-213ENST00000525209 GPS1Q13098 491 aa4.66□□□□□ -1.66
CD44-213ENST00000525209 FRG1Q14331 258 aaKnown RBP4.66□□□□□ -1.66
CD44-213ENST00000525209 SLC29A2Q14542 456 aa4.66□□□□□ -1.66
CD44-213ENST00000525209 RSPO4Q2I0M5 234 aaPredicted RBP4.66□□□□□ -1.66
CD44-213ENST00000525209 PLAG1Q6DJT9 500 aa4.66□□□□□ -1.66
CD44-213ENST00000525209 RBPMS2Q6ZRY4 209 aaKnown RBP4.66□□□□□ -1.66
CD44-213ENST00000525209 TAF8Q7Z7C8 310 aa4.66□□□□□ -1.66
CD44-213ENST00000525209 DMRTC2Q8IXT2 367 aaPredicted RBP4.66□□□□□ -1.66
CD44-213ENST00000525209 Q8N3U1 123 aa4.66□□□□□ -1.66
CD44-213ENST00000525209 DNAJC5GQ8N7S2 189 aa4.66□□□□□ -1.66
CD44-213ENST00000525209 SLC4A11Q8NBS3 891 aa4.66□□□□□ -1.66
CD44-213ENST00000525209 WDR60Q8WVS4 1066 aa4.66□□□□□ -1.66
CD44-213ENST00000525209 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.66□□□□□ -1.66
CD44-213ENST00000525209 TMCO6Q96DC7 493 aa4.66□□□□□ -1.66
CD44-213ENST00000525209 MRPL38Q96DV4 380 aaKnown RBP4.66□□□□□ -1.66
CD44-213ENST00000525209 SGF29Q96ES7 293 aa4.66□□□□□ -1.66
CD44-213ENST00000525209 TOE1Q96GM8 510 aaKnown RBP4.66□□□□□ -1.66
CD44-213ENST00000525209 ZDHHC12Q96GR4 267 aa4.66□□□□□ -1.66
CD44-213ENST00000525209 ERO1AQ96HE7 468 aa4.66□□□□□ -1.66
CD44-213ENST00000525209 RBM17Q96I25 401 aaKnown RBP4.66□□□□□ -1.66
CD44-213ENST00000525209 EPSTI1Q96J88 318 aa4.66□□□□□ -1.66
CD44-213ENST00000525209 ADAD1Q96M93 576 aaKnown RBP4.66□□□□□ -1.66
CD44-213ENST00000525209 DGAT2Q96PD7 388 aa4.66□□□□□ -1.66
CD44-213ENST00000525209 GAL3ST4Q96RP7 486 aa4.66□□□□□ -1.66
CD44-213ENST00000525209 FOXB1Q99853 325 aa4.66□□□□□ -1.66
CD44-213ENST00000525209 SLC25A23Q9BV35 468 aa4.66□□□□□ -1.66
CD44-213ENST00000525209 TEX13AQ9BXU3 409 aaPredicted RBP4.66□□□□□ -1.66
CD44-213ENST00000525209 MRPL1Q9BYD6 325 aaKnown RBP4.66□□□□□ -1.66
CD44-213ENST00000525209 NFKBIZQ9BYH8 718 aa4.66□□□□□ -1.66
CD44-213ENST00000525209 TRIM31Q9BZY9 425 aa4.66□□□□□ -1.66
CD44-213ENST00000525209 LRRCC1Q9C099 1032 aa4.66□□□□□ -1.66
CD44-213ENST00000525209 MTG2Q9H4K7 406 aa4.66□□□□□ -1.66
CD44-213ENST00000525209 GSX1Q9H4S2 264 aaPredicted RBP4.66□□□□□ -1.66
CD44-213ENST00000525209 SLC32A1Q9H598 525 aa4.66□□□□□ -1.66
CD44-213ENST00000525209 STN1Q9H668 368 aaKnown RBP4.66□□□□□ -1.66
CD44-213ENST00000525209 DENND2DQ9H6A0 471 aaPredicted RBP4.66□□□□□ -1.66
CD44-213ENST00000525209 SH2D4AQ9H788 454 aa4.66□□□□□ -1.66
CD44-213ENST00000525209 TTC12Q9H892 705 aaPredicted RBP4.66□□□□□ -1.66
CD44-213ENST00000525209 FANCEQ9HB96 536 aa4.66□□□□□ -1.66
CD44-213ENST00000525209 SOHLH2Q9NX45 425 aa4.66□□□□□ -1.66
CD44-213ENST00000525209 ZSCAN32Q9NX65 697 aa4.66□□□□□ -1.66
CD44-213ENST00000525209 SIDT1Q9NXL6 827 aaKnown RBP4.66□□□□□ -1.66
CD44-213ENST00000525209 QPCTLQ9NXS2 382 aa4.66□□□□□ -1.66
CD44-213ENST00000525209 BTG4Q9NY30 223 aa4.66□□□□□ -1.66
CD44-213ENST00000525209 RCOR1Q9UKL0 485 aa4.66□□□□□ -1.66
CD44-213ENST00000525209 INTS6Q9UL03 887 aaKnown RBP4.66□□□□□ -1.66
CD44-213ENST00000525209 KCNH3Q9ULD8 1083 aa4.66□□□□□ -1.66
CD44-213ENST00000525209 PPIEQ9UNP9 301 aaKnown RBP4.66□□□□□ -1.66
CD44-213ENST00000525209 ATP11BQ9Y2G3 1177 aa4.66□□□□□ -1.66
CD44-213ENST00000525209 KCNK7Q9Y2U2 307 aa4.66□□□□□ -1.66
CD44-213ENST00000525209 SNX9Q9Y5X1 595 aa4.66□□□□□ -1.66
CD44-213ENST00000525209 MAGI1Q96QZ7 1491 aaPredicted RBP4.66□□□□□ -1.66
CD44-213ENST00000525209 ADGRF5Q8IZF2 1346 aa4.66□□□□□ -1.66
CD44-213ENST00000525209 ERCC6L2Q5T890 1561 aa4.65□□□□□ -1.66
CD44-213ENST00000525209 CCDC187A0A096LP49 1063 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 A0A1W2PQM1 296 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 XKRY2A2RUG3 117 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 OR2A25A4D2G3 310 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 ENO4A6NNW6 628 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 A8MZ25 164 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 RBAK-RBAKDNI3L0D1 243 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 J3KTA2 159 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 RAB27BO00194 218 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 CXCL11O14625 94 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 SEPT4O43236 478 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 NRP2O60462 931 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 FOXD2O60548 495 aaPredicted RBP4.65□□□□□ -1.67
CD44-213ENST00000525209 DIAPH2O60879 1101 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 OPHN1O60890 802 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 RGS9O75916 674 aaPredicted RBP4.65□□□□□ -1.67
CD44-213ENST00000525209 VIPP01282 170 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 AMY1AP04745 511 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 RB1P06400 928 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 TPM1P09493 284 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 POLR2MP0CAP2 368 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 SRCP12931 536 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 JAK1P23458 1154 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 PBX3P40426 434 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 MDH1P40925 334 aaKnown RBP4.65□□□□□ -1.67
CD44-213ENST00000525209 SLC15A1P46059 708 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 SLC11A2P49281 568 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 RGS3P49796 1198 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 CAPZA1P52907 286 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 EIF3BP55884 814 aaKnown RBP4.65□□□□□ -1.67
CD44-213ENST00000525209 WNT3AP56704 352 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 KIAA1024LP59773 190 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 ASIC1P78348 528 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 TEKQ02763 1124 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 TRDNQ13061 729 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 GPM6BQ13491 265 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 ATP1A4Q13733 1029 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 CBFBQ13951 182 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 NEDD9Q14511 834 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 HS1BP3Q53T59 392 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 ZNF766Q5HY98 468 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 STXBP5Q5T5C0 1151 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 DENND1BQ6P3S1 775 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 ZDHHC24Q6UX98 284 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 MAMDC4Q6UXC1 1216 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms