RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 CTHP32929 405 aa7.82□□□□□ -1.16
HMGXB3-204ENST00000513318 ARL4AP40617 200 aa7.82□□□□□ -1.16
HMGXB3-204ENST00000513318 SGSHP51688 502 aa7.82□□□□□ -1.16
HMGXB3-204ENST00000513318 TPI1P60174 286 aa7.82□□□□□ -1.16
HMGXB3-204ENST00000513318 MLF2Q15773 248 aaPredicted RBP7.82□□□□□ -1.16
HMGXB3-204ENST00000513318 GAB4Q2WGN9 574 aa7.82□□□□□ -1.16
HMGXB3-204ENST00000513318 PREPLQ4J6C6 727 aaPredicted RBP7.82□□□□□ -1.16
HMGXB3-204ENST00000513318 RNF43Q68DV7 783 aa7.82□□□□□ -1.16
HMGXB3-204ENST00000513318 TXNRD3NBQ6F5E7 133 aa7.82□□□□□ -1.16
HMGXB3-204ENST00000513318 FBXL22Q6P050 247 aa7.82□□□□□ -1.16
HMGXB3-204ENST00000513318 CHST9Q7L1S5 443 aa7.82□□□□□ -1.16
HMGXB3-204ENST00000513318 PEX26Q7Z412 305 aa7.82□□□□□ -1.16
HMGXB3-204ENST00000513318 CPNE8Q86YQ8 564 aa7.82□□□□□ -1.16
HMGXB3-204ENST00000513318 CCDC117Q8IWD4 279 aaPredicted RBP7.82□□□□□ -1.16
HMGXB3-204ENST00000513318 ZNF683Q8IZ20 524 aa7.82□□□□□ -1.16
HMGXB3-204ENST00000513318 PYROXD2Q8N2H3 581 aa7.82□□□□□ -1.16
HMGXB3-204ENST00000513318 FAM160A2Q8N612 972 aaPredicted RBP7.82□□□□□ -1.16
HMGXB3-204ENST00000513318 FAM71BQ8TC56 605 aa7.82□□□□□ -1.16
HMGXB3-204ENST00000513318 DDI1Q8WTU0 396 aa7.82□□□□□ -1.16
HMGXB3-204ENST00000513318 HSPH1Q92598 858 aa7.82□□□□□ -1.16
HMGXB3-204ENST00000513318 TBC1D31Q96DN5 1066 aa7.82□□□□□ -1.16
HMGXB3-204ENST00000513318 XPO6Q96QU8 1125 aaKnown RBP7.82□□□□□ -1.16
HMGXB3-204ENST00000513318 SPSB2Q99619 263 aa7.82□□□□□ -1.16
HMGXB3-204ENST00000513318 SLC2A11Q9BYW1 496 aa7.82□□□□□ -1.16
HMGXB3-204ENST00000513318 ZYG11BQ9C0D3 744 aa7.82□□□□□ -1.16
HMGXB3-204ENST00000513318 ARHGEF3Q9NR81 526 aa7.82□□□□□ -1.16
HMGXB3-204ENST00000513318 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.82□□□□□ -1.16
HMGXB3-204ENST00000513318 GPATCH2LQ9NWQ4 482 aa7.82□□□□□ -1.16
HMGXB3-204ENST00000513318 DDX56Q9NY93 547 aaKnown RBP7.82□□□□□ -1.16
HMGXB3-204ENST00000513318 RCOR3Q9P2K3 495 aaPredicted RBP7.82□□□□□ -1.16
HMGXB3-204ENST00000513318 PPARGC1AQ9UBK2 798 aaKnown RBP7.82□□□□□ -1.16
HMGXB3-204ENST00000513318 WNT16Q9UBV4 365 aa7.82□□□□□ -1.16
HMGXB3-204ENST00000513318 AMFRQ9UKV5 643 aa7.82□□□□□ -1.16
HMGXB3-204ENST00000513318 NEU3Q9UQ49 428 aa7.82□□□□□ -1.16
HMGXB3-204ENST00000513318 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.82□□□□□ -1.16
HMGXB3-204ENST00000513318 PIAS3Q9Y6X2 628 aa7.82□□□□□ -1.16
HMGXB3-204ENST00000513318 VCANP13611 3396 aa7.82□□□□□ -1.16
HMGXB3-204ENST00000513318 PLXND1Q9Y4D7 1925 aa7.82□□□□□ -1.16
HMGXB3-204ENST00000513318 SPAG17Q6Q759 2223 aa7.81□□□□□ -1.16
HMGXB3-204ENST00000513318 CACNA1IQ9P0X4 2223 aa7.81□□□□□ -1.16
HMGXB3-204ENST00000513318 DRGXA6NNA5 263 aa7.81□□□□□ -1.16
HMGXB3-204ENST00000513318 SPECC1L-ADORA2AF8WAN1 911 aa7.81□□□□□ -1.16
HMGXB3-204ENST00000513318 FAM72CH0Y354 149 aa7.81□□□□□ -1.16
HMGXB3-204ENST00000513318 H3BRJ5 948 aa7.81□□□□□ -1.16
HMGXB3-204ENST00000513318 EEF2KO00418 725 aaKnown RBP7.81□□□□□ -1.16
HMGXB3-204ENST00000513318 MAN2B1O00754 1011 aa7.81□□□□□ -1.16
HMGXB3-204ENST00000513318 FGF10O15520 208 aaPredicted RBP7.81□□□□□ -1.16
HMGXB3-204ENST00000513318 DCXO43602 365 aa7.81□□□□□ -1.16
HMGXB3-204ENST00000513318 CREB3O43889 395 aa7.81□□□□□ -1.16
HMGXB3-204ENST00000513318 SRGAP2O75044 1071 aa7.81□□□□□ -1.16
HMGXB3-204ENST00000513318 CLDN11O75508 207 aa7.81□□□□□ -1.16
HMGXB3-204ENST00000513318 LUC7L3O95232 432 aaKnown RBP7.81□□□□□ -1.16
HMGXB3-204ENST00000513318 MSNP26038 577 aaKnown RBP7.81□□□□□ -1.16
HMGXB3-204ENST00000513318 CTNNA2P26232 953 aa7.81□□□□□ -1.16
HMGXB3-204ENST00000513318 EPHB2P29323 1055 aa7.81□□□□□ -1.16
HMGXB3-204ENST00000513318 CTNNA1P35221 906 aaKnown RBP7.81□□□□□ -1.16
HMGXB3-204ENST00000513318 OPRD1P41143 372 aa7.81□□□□□ -1.16
HMGXB3-204ENST00000513318 CDH4P55283 916 aa7.81□□□□□ -1.16
HMGXB3-204ENST00000513318 CDH6P55285 790 aa7.81□□□□□ -1.16
HMGXB3-204ENST00000513318 RPS24P62847 133 aaKnown RBP7.81□□□□□ -1.16
HMGXB3-204ENST00000513318 ZXDAP98168 799 aa7.81□□□□□ -1.16
HMGXB3-204ENST00000513318 PRKCQQ04759 706 aa7.81□□□□□ -1.16
HMGXB3-204ENST00000513318 CDH18Q13634 790 aa7.81□□□□□ -1.16
HMGXB3-204ENST00000513318 KRT81Q14533 505 aa7.81□□□□□ -1.16
HMGXB3-204ENST00000513318 PDK2Q15119 407 aa7.81□□□□□ -1.16
HMGXB3-204ENST00000513318 CA9Q16790 459 aa7.81□□□□□ -1.16
HMGXB3-204ENST00000513318 ODF2Q5BJF6 829 aa7.81□□□□□ -1.16
HMGXB3-204ENST00000513318 PPP6R3Q5H9R7 873 aaPredicted RBP7.81□□□□□ -1.16
HMGXB3-204ENST00000513318 KCNT1Q5JUK3 1230 aa7.81□□□□□ -1.16
HMGXB3-204ENST00000513318 ZFYVE27Q5T4F4 411 aa7.81□□□□□ -1.16
HMGXB3-204ENST00000513318 FAM72AQ5TYM5 149 aa7.81□□□□□ -1.16
HMGXB3-204ENST00000513318 FAM72DQ6L9T8 149 aa7.81□□□□□ -1.16
HMGXB3-204ENST00000513318 TPRG1Q6ZUI0 275 aa7.81□□□□□ -1.16
HMGXB3-204ENST00000513318 C14orf80Q86SX3 495 aa7.81□□□□□ -1.16
HMGXB3-204ENST00000513318 NT5DC3Q86UY8 548 aa7.81□□□□□ -1.16
HMGXB3-204ENST00000513318 FAM72BQ86X60 149 aa7.81□□□□□ -1.16
HMGXB3-204ENST00000513318 CIR1Q86X95 450 aaPredicted RBP7.81□□□□□ -1.16
HMGXB3-204ENST00000513318 VSIG1Q86XK7 387 aa7.81□□□□□ -1.16
HMGXB3-204ENST00000513318 MFN1Q8IWA4 741 aa7.81□□□□□ -1.16
HMGXB3-204ENST00000513318 MAP7D3Q8IWC1 876 aa7.81□□□□□ -1.16
HMGXB3-204ENST00000513318 SUGP1Q8IWZ8 645 aaKnown RBP7.81□□□□□ -1.16
HMGXB3-204ENST00000513318 REXO1L1PQ8IX06 675 aa7.81□□□□□ -1.16
HMGXB3-204ENST00000513318 ETFBKMTQ8IXQ9 262 aa7.81□□□□□ -1.16
HMGXB3-204ENST00000513318 CCAR2Q8N163 923 aaKnown RBP7.81□□□□□ -1.16
HMGXB3-204ENST00000513318 CD101Q93033 1021 aa7.81□□□□□ -1.16
HMGXB3-204ENST00000513318 BHMTQ93088 406 aa7.81□□□□□ -1.16
HMGXB3-204ENST00000513318 IGSF8Q969P0 613 aa7.81□□□□□ -1.16
HMGXB3-204ENST00000513318 CHFRQ96EP1 664 aa7.81□□□□□ -1.16
HMGXB3-204ENST00000513318 MYEOVQ96EZ4 313 aa7.81□□□□□ -1.16
HMGXB3-204ENST00000513318 KCTD15Q96SI1 283 aaPredicted RBP7.81□□□□□ -1.16
HMGXB3-204ENST00000513318 ZNF670Q9BS34 389 aa7.81□□□□□ -1.16
HMGXB3-204ENST00000513318 CATSPERBQ9H7T0 1116 aa7.81□□□□□ -1.16
HMGXB3-204ENST00000513318 PCDH18Q9HCL0 1135 aa7.81□□□□□ -1.16
HMGXB3-204ENST00000513318 KCND1Q9NSA2 647 aa7.81□□□□□ -1.16
HMGXB3-204ENST00000513318 TRMT1Q9NXH9 659 aaKnown RBP7.81□□□□□ -1.16
HMGXB3-204ENST00000513318 DONSONQ9NYP3 566 aa7.81□□□□□ -1.16
HMGXB3-204ENST00000513318 PLK2Q9NYY3 685 aa7.81□□□□□ -1.16
HMGXB3-204ENST00000513318 FBXL21Q9UKT6 434 aa7.81□□□□□ -1.16
HMGXB3-204ENST00000513318 HYOU1Q9Y4L1 999 aa7.81□□□□□ -1.16
HMGXB3-204ENST00000513318 SNX10Q9Y5X0 201 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms