RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 LRIG2O94898 1065 aa14.87□□□□□ -0.03
DDX41-208ENST00000507955 CD68P34810 354 aaPredicted RBP14.87□□□□□ -0.03
DDX41-208ENST00000507955 GJA9P57773 515 aa14.87□□□□□ -0.03
DDX41-208ENST00000507955 PAFAH1B3Q15102 231 aaKnown RBP14.87□□□□□ -0.03
DDX41-208ENST00000507955 RAB41Q5JT25 222 aa14.87□□□□□ -0.03
DDX41-208ENST00000507955 CERCAMQ5T4B2 595 aa14.87□□□□□ -0.03
DDX41-208ENST00000507955 SDHAF4Q5VUM1 108 aa14.87□□□□□ -0.03
DDX41-208ENST00000507955 LRRC8BQ6P9F7 803 aa14.87□□□□□ -0.03
DDX41-208ENST00000507955 TAC4Q86UU9 113 aa14.87□□□□□ -0.03
DDX41-208ENST00000507955 SOCS4Q8WXH5 440 aa14.87□□□□□ -0.03
DDX41-208ENST00000507955 NUDCD1Q96RS6 583 aa14.87□□□□□ -0.03
DDX41-208ENST00000507955 AGAP2Q99490 1192 aa14.87□□□□□ -0.03
DDX41-208ENST00000507955 ARL8BQ9NVJ2 186 aa14.87□□□□□ -0.03
DDX41-208ENST00000507955 HACD1B0YJ81 288 aa14.86□□□□□ -0.03
DDX41-208ENST00000507955 ATP9BO43861 1147 aa14.86□□□□□ -0.03
DDX41-208ENST00000507955 OPHN1O60890 802 aa14.86□□□□□ -0.03
DDX41-208ENST00000507955 FDFT1P37268 417 aa14.86□□□□□ -0.03
DDX41-208ENST00000507955 ARFIP2P53365 341 aa14.86□□□□□ -0.03
DDX41-208ENST00000507955 PRKCZQ05513 592 aa14.86□□□□□ -0.03
DDX41-208ENST00000507955 SEMA3BQ13214 749 aa14.86□□□□□ -0.03
DDX41-208ENST00000507955 TAF11Q15544 211 aa14.86□□□□□ -0.03
DDX41-208ENST00000507955 RWDD4Q6NW29 188 aaKnown RBP14.86□□□□□ -0.03
DDX41-208ENST00000507955 SPNS2Q8IVW8 549 aa14.86□□□□□ -0.03
DDX41-208ENST00000507955 TLE6Q9H808 572 aa14.86□□□□□ -0.03
DDX41-208ENST00000507955 CNGB3Q9NQW8 809 aa14.86□□□□□ -0.03
DDX41-208ENST00000507955 RCOR3Q9P2K3 495 aaPredicted RBP14.86□□□□□ -0.03
DDX41-208ENST00000507955 SFMBT1Q9UHJ3 866 aa14.86□□□□□ -0.03
DDX41-208ENST00000507955 SCN10AQ9Y5Y9 1956 aa14.86□□□□□ -0.03
DDX41-208ENST00000507955 LYPLA1O75608 230 aaPredicted RBP14.86□□□□□ -0.03
DDX41-208ENST00000507955 KCNA4P22459 653 aa14.86□□□□□ -0.03
DDX41-208ENST00000507955 SARNPP82979 210 aaKnown RBP14.86□□□□□ -0.03
DDX41-208ENST00000507955 CACNB2Q08289 660 aaPredicted RBP14.86□□□□□ -0.03
DDX41-208ENST00000507955 MGAT3Q09327 533 aa14.86□□□□□ -0.03
DDX41-208ENST00000507955 PPP2R5DQ14738 602 aa14.86□□□□□ -0.03
DDX41-208ENST00000507955 LGSNQ5TDP6 509 aa14.86□□□□□ -0.03
DDX41-208ENST00000507955 ATG14Q6ZNE5 492 aa14.86□□□□□ -0.03
DDX41-208ENST00000507955 CMC1Q7Z7K0 106 aa14.86□□□□□ -0.03
DDX41-208ENST00000507955 RSPH3Q86UC2 560 aa14.86□□□□□ -0.03
DDX41-208ENST00000507955 CHSY1Q86X52 802 aa14.86□□□□□ -0.03
DDX41-208ENST00000507955 NUDCD3Q8IVD9 361 aa14.86□□□□□ -0.03
DDX41-208ENST00000507955 ARID3BQ8IVW6 561 aaPredicted RBP14.86□□□□□ -0.03
DDX41-208ENST00000507955 DNAAF3Q8N9W5 541 aa14.86□□□□□ -0.03
DDX41-208ENST00000507955 MFSD3Q96ES6 412 aa14.86□□□□□ -0.03
DDX41-208ENST00000507955 SMARCD1Q96GM5 515 aa14.86□□□□□ -0.03
DDX41-208ENST00000507955 CADM1Q9BY67 442 aaKnown RBP14.86□□□□□ -0.03
DDX41-208ENST00000507955 XPNPEP3Q9NQH7 507 aa14.86□□□□□ -0.03
DDX41-208ENST00000507955 CDH9Q9ULB4 789 aa14.86□□□□□ -0.03
DDX41-208ENST00000507955 PPP1R12AO14974 1030 aaPredicted RBP14.85□□□□□ -0.03
DDX41-208ENST00000507955 STK10O94804 968 aaKnown RBP14.85□□□□□ -0.03
DDX41-208ENST00000507955 UPP2O95045 317 aa14.85□□□□□ -0.03
DDX41-208ENST00000507955 PTPN4P29074 926 aa14.85□□□□□ -0.03
DDX41-208ENST00000507955 PACS1Q6VY07 963 aa14.85□□□□□ -0.03
DDX41-208ENST00000507955 OTOP3Q7RTS5 596 aa14.85□□□□□ -0.03
DDX41-208ENST00000507955 ZNF778Q96MU6 729 aa14.85□□□□□ -0.03
DDX41-208ENST00000507955 DNAI2Q9GZS0 605 aa14.85□□□□□ -0.03
DDX41-208ENST00000507955 ACSS2Q9NR19 701 aa14.85□□□□□ -0.03
DDX41-208ENST00000507955 LNPEPQ9UIQ6 1025 aa14.85□□□□□ -0.03
DDX41-208ENST00000507955 SMNDC1O75940 238 aaKnown RBP eCLIP14.85□□□□□ -0.03
DDX41-208ENST00000507955 JCHAINP01591 159 aa14.85□□□□□ -0.03
DDX41-208ENST00000507955 NFKB1P19838 968 aa14.85□□□□□ -0.03
DDX41-208ENST00000507955 CPA2P48052 419 aa14.85□□□□□ -0.03
DDX41-208ENST00000507955 RPL10AP62906 217 aaKnown RBP14.85□□□□□ -0.03
DDX41-208ENST00000507955 ZBTB16Q05516 673 aa14.85□□□□□ -0.03
DDX41-208ENST00000507955 NIPAL4Q0D2K0 466 aa14.85□□□□□ -0.03
DDX41-208ENST00000507955 PDE1CQ14123 709 aaPredicted RBP14.85□□□□□ -0.03
DDX41-208ENST00000507955 LPIN1Q14693 890 aa14.85□□□□□ -0.03
DDX41-208ENST00000507955 C4orf22Q6V702 233 aa14.85□□□□□ -0.03
DDX41-208ENST00000507955 KDELC2Q7Z4H8 507 aa14.85□□□□□ -0.03
DDX41-208ENST00000507955 TMEM86AQ8N2M4 240 aa14.85□□□□□ -0.03
DDX41-208ENST00000507955 E2F7Q96AV8 911 aa14.85□□□□□ -0.03
DDX41-208ENST00000507955 MOCOSQ96EN8 888 aa14.85□□□□□ -0.03
DDX41-208ENST00000507955 PTCD3Q96EY7 689 aaKnown RBP14.85□□□□□ -0.03
DDX41-208ENST00000507955 ZNF419Q96HQ0 510 aaPredicted RBP14.85□□□□□ -0.03
DDX41-208ENST00000507955 NAF1Q96HR8 494 aaKnown RBP14.85□□□□□ -0.03
DDX41-208ENST00000507955 MLPHQ9BV36 600 aaPredicted RBP14.85□□□□□ -0.03
DDX41-208ENST00000507955 CAB39LQ9H9S4 337 aa14.85□□□□□ -0.03
DDX41-208ENST00000507955 BATF3Q9NR55 127 aa14.85□□□□□ -0.03
DDX41-208ENST00000507955 NDFIP2Q9NV92 336 aa14.85□□□□□ -0.03
DDX41-208ENST00000507955 GPR182O15218 404 aa14.84□□□□□ -0.03
DDX41-208ENST00000507955 GSRP00390 522 aa14.84□□□□□ -0.03
DDX41-208ENST00000507955 DLG2Q15700 870 aa14.84□□□□□ -0.03
DDX41-208ENST00000507955 KHDC1Q4VXA5 237 aaKnown RBP14.84□□□□□ -0.03
DDX41-208ENST00000507955 RASSF3Q86WH2 238 aa14.84□□□□□ -0.03
DDX41-208ENST00000507955 PSTKQ8IV42 348 aaKnown RBP14.84□□□□□ -0.03
DDX41-208ENST00000507955 ENDOVQ8N8Q3 282 aaKnown RBP14.84□□□□□ -0.03
DDX41-208ENST00000507955 ACVR1CQ8NER5 493 aa14.84□□□□□ -0.03
DDX41-208ENST00000507955 SPATA22Q8NHS9 363 aa14.84□□□□□ -0.03
DDX41-208ENST00000507955 TSPAN18Q96SJ8 248 aa14.84□□□□□ -0.03
DDX41-208ENST00000507955 CHRAC1Q9NRG0 131 aa14.84□□□□□ -0.03
DDX41-208ENST00000507955 EMCNQ9ULC0 261 aa14.84□□□□□ -0.03
DDX41-208ENST00000507955 GIT1Q9Y2X7 761 aa14.84□□□□□ -0.03
DDX41-208ENST00000507955 LRRC42Q9Y546 428 aa14.84□□□□□ -0.03
DDX41-208ENST00000507955 DFFAO00273 331 aa14.84□□□□□ -0.03
DDX41-208ENST00000507955 ITM2AO43736 263 aa14.84□□□□□ -0.03
DDX41-208ENST00000507955 ALDH1A2O94788 518 aa14.84□□□□□ -0.03
DDX41-208ENST00000507955 FBXO21O94952 628 aa14.84□□□□□ -0.03
DDX41-208ENST00000507955 CCNFP41002 786 aa14.84□□□□□ -0.03
DDX41-208ENST00000507955 PDE1BQ01064 536 aa14.84□□□□□ -0.03
DDX41-208ENST00000507955 CBLBQ13191 982 aa14.84□□□□□ -0.03
DDX41-208ENST00000507955 IRF5Q13568 498 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms