RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 SGTAO43765 313 aa9.73□□□□□ -0.85
VEGFA-212ENST00000480614 OR6A2O95222 327 aa9.73□□□□□ -0.85
VEGFA-212ENST00000480614 ERFP50548 548 aa9.73□□□□□ -0.85
VEGFA-212ENST00000480614 BCAP31P51572 246 aa9.73□□□□□ -0.85
VEGFA-212ENST00000480614 NME5P56597 212 aa9.73□□□□□ -0.85
VEGFA-212ENST00000480614 TBCELQ5QJ74 424 aa9.73□□□□□ -0.85
VEGFA-212ENST00000480614 PCNX4Q63HM2 1172 aa9.73□□□□□ -0.85
VEGFA-212ENST00000480614 RBM43Q6ZSC3 357 aaKnown RBP9.73□□□□□ -0.85
VEGFA-212ENST00000480614 SH3BP5LQ7L8J4 393 aa9.73□□□□□ -0.85
VEGFA-212ENST00000480614 CDH24Q86UP0 819 aa9.73□□□□□ -0.85
VEGFA-212ENST00000480614 MYRFQ9Y2G1 1151 aa9.73□□□□□ -0.85
VEGFA-212ENST00000480614 AXIN2Q9Y2T1 843 aa9.73□□□□□ -0.85
VEGFA-212ENST00000480614 TTC3P53804 2025 aa9.73□□□□□ -0.85
VEGFA-212ENST00000480614 TTKP33981 857 aa9.73□□□□□ -0.85
VEGFA-212ENST00000480614 CAMKK1Q8N5S9 505 aa9.73□□□□□ -0.85
VEGFA-212ENST00000480614 NARS2Q96I59 477 aaKnown RBP9.73□□□□□ -0.85
VEGFA-212ENST00000480614 SLC25A23Q9BV35 468 aa9.73□□□□□ -0.85
VEGFA-212ENST00000480614 PREX1Q8TCU6 1659 aa9.73□□□□□ -0.85
VEGFA-212ENST00000480614 IRGMA1A4Y4 181 aa9.73□□□□□ -0.85
VEGFA-212ENST00000480614 SLC2A4P14672 509 aa9.73□□□□□ -0.85
VEGFA-212ENST00000480614 RRM1P23921 792 aa9.73□□□□□ -0.85
VEGFA-212ENST00000480614 MARC1Q5VT66 337 aa9.73□□□□□ -0.85
VEGFA-212ENST00000480614 PLEKHH3Q7Z736 793 aa9.73□□□□□ -0.85
VEGFA-212ENST00000480614 FNDC5Q8NAU1 212 aa9.73□□□□□ -0.85
VEGFA-212ENST00000480614 TRDMT1O14717 391 aaKnown RBP9.73□□□□□ -0.85
VEGFA-212ENST00000480614 TLX1P31314 330 aaPredicted RBP9.73□□□□□ -0.85
VEGFA-212ENST00000480614 NPY2RP49146 381 aa9.73□□□□□ -0.85
VEGFA-212ENST00000480614 CLK3P49761 638 aaKnown RBP9.73□□□□□ -0.85
VEGFA-212ENST00000480614 STOX1Q6ZVD7 989 aa9.73□□□□□ -0.85
VEGFA-212ENST00000480614 FLCNQ8NFG4 579 aa9.73□□□□□ -0.85
VEGFA-212ENST00000480614 CISHQ9NSE2 258 aa9.73□□□□□ -0.85
VEGFA-212ENST00000480614 PCDH8O95206 1070 aa9.73□□□□□ -0.85
VEGFA-212ENST00000480614 JCHAINP01591 159 aa9.73□□□□□ -0.85
VEGFA-212ENST00000480614 SOX11P35716 441 aa9.73□□□□□ -0.85
VEGFA-212ENST00000480614 MAPK8P45983 427 aa9.73□□□□□ -0.85
VEGFA-212ENST00000480614 Q4G0T1 1027 aa9.73□□□□□ -0.85
VEGFA-212ENST00000480614 PAGE2Q7Z2X7 111 aa9.73□□□□□ -0.85
VEGFA-212ENST00000480614 ACOT1Q86TX2 421 aa9.73□□□□□ -0.85
VEGFA-212ENST00000480614 ZNF671Q8TAW3 534 aa9.73□□□□□ -0.85
VEGFA-212ENST00000480614 MYDGFQ969H8 173 aa9.73□□□□□ -0.85
VEGFA-212ENST00000480614 KLF6Q99612 283 aaPredicted RBP9.73□□□□□ -0.85
VEGFA-212ENST00000480614 RUSC1Q9BVN2 902 aa9.73□□□□□ -0.85
VEGFA-212ENST00000480614 CSHL1Q14406 222 aa9.73□□□□□ -0.85
VEGFA-212ENST00000480614 SPDYCQ5MJ68 293 aa9.73□□□□□ -0.85
VEGFA-212ENST00000480614 FIG4Q92562 907 aa9.73□□□□□ -0.85
VEGFA-212ENST00000480614 ZNF624Q9P2J8 865 aaPredicted RBP9.73□□□□□ -0.85
VEGFA-212ENST00000480614 CROTQ9UKG9 612 aa9.73□□□□□ -0.85
VEGFA-212ENST00000480614 CBWD3Q5JTY5 395 aa9.73□□□□□ -0.85
VEGFA-212ENST00000480614 CBWD5Q5RIA9 395 aa9.73□□□□□ -0.85
VEGFA-212ENST00000480614 FGF10O15520 208 aaPredicted RBP9.72□□□□□ -0.85
VEGFA-212ENST00000480614 CPSF4O95639 269 aaKnown RBP9.72□□□□□ -0.85
VEGFA-212ENST00000480614 ZNF605Q86T29 641 aa9.72□□□□□ -0.85
VEGFA-212ENST00000480614 PALB2Q86YC2 1186 aa9.72□□□□□ -0.85
VEGFA-212ENST00000480614 DEFB107AQ8IZN7 70 aa9.72□□□□□ -0.85
VEGFA-212ENST00000480614 LENG9Q96B70 501 aa9.72□□□□□ -0.85
VEGFA-212ENST00000480614 ZDHHC15Q96MV8 337 aa9.72□□□□□ -0.85
VEGFA-212ENST00000480614 EHD4Q9H223 541 aa9.72□□□□□ -0.85
VEGFA-212ENST00000480614 KCNF1Q9H3M0 494 aa9.72□□□□□ -0.85
VEGFA-212ENST00000480614 GSTK1Q9Y2Q3 226 aa9.72□□□□□ -0.85
VEGFA-212ENST00000480614 H3BN98 237 aa9.72□□□□□ -0.85
VEGFA-212ENST00000480614 PROSCO94903 275 aa9.72□□□□□ -0.85
VEGFA-212ENST00000480614 KLRC1P26715 233 aa9.72□□□□□ -0.85
VEGFA-212ENST00000480614 GMPSP49915 693 aaPredicted RBP9.72□□□□□ -0.85
VEGFA-212ENST00000480614 RAD9BQ6WBX8 426 aa9.72□□□□□ -0.85
VEGFA-212ENST00000480614 SPOCD1Q6ZMY3 1216 aa9.72□□□□□ -0.85
VEGFA-212ENST00000480614 GDPD5Q8WTR4 605 aa9.72□□□□□ -0.85
VEGFA-212ENST00000480614 CRNNQ9UBG3 495 aaPredicted RBP9.72□□□□□ -0.85
VEGFA-212ENST00000480614 CELF2O95319 508 aaKnown RBP9.72□□□□□ -0.85
VEGFA-212ENST00000480614 FBXO47Q5MNV8 452 aa9.72□□□□□ -0.85
VEGFA-212ENST00000480614 FBXO33Q7Z6M2 555 aa9.72□□□□□ -0.85
VEGFA-212ENST00000480614 RBAK-RBAKDNI3L0D1 243 aa9.72□□□□□ -0.85
VEGFA-212ENST00000480614 CBX4O00257 560 aa9.72□□□□□ -0.85
VEGFA-212ENST00000480614 NPR3P17342 541 aa9.72□□□□□ -0.85
VEGFA-212ENST00000480614 TNNI3P19429 210 aa9.72□□□□□ -0.85
VEGFA-212ENST00000480614 YY1P25490 414 aa9.72□□□□□ -0.85
VEGFA-212ENST00000480614 ACLYP53396 1101 aa9.72□□□□□ -0.85
VEGFA-212ENST00000480614 INO80DQ53TQ3 878 aaPredicted RBP9.72□□□□□ -0.85
VEGFA-212ENST00000480614 ILDR2Q71H61 639 aa9.72□□□□□ -0.85
VEGFA-212ENST00000480614 TPD52L3Q96J77 140 aa9.72□□□□□ -0.85
VEGFA-212ENST00000480614 JMJD4Q9H9V9 463 aa9.72□□□□□ -0.85
VEGFA-212ENST00000480614 NCKAP1Q9Y2A7 1128 aa9.72□□□□□ -0.85
VEGFA-212ENST00000480614 PPRC1Q5VV67 1664 aaKnown RBP9.72□□□□□ -0.85
VEGFA-212ENST00000480614 MED24O75448 989 aa9.72□□□□□ -0.85
VEGFA-212ENST00000480614 CYP7B1O75881 506 aa9.72□□□□□ -0.85
VEGFA-212ENST00000480614 PPP4CP60510 307 aa9.72□□□□□ -0.85
VEGFA-212ENST00000480614 GPSM1Q86YR5 675 aa9.72□□□□□ -0.85
VEGFA-212ENST00000480614 DCLK3Q9C098 648 aa9.72□□□□□ -0.85
VEGFA-212ENST00000480614 TMBIM4Q9HC24 238 aa9.72□□□□□ -0.85
VEGFA-212ENST00000480614 A1CFQ9NQ94 594 aaKnown RBP9.72□□□□□ -0.85
VEGFA-212ENST00000480614 COMMD9Q9P000 198 aa9.72□□□□□ -0.85
VEGFA-212ENST00000480614 NDUFAF1Q9Y375 327 aa9.72□□□□□ -0.85
VEGFA-212ENST00000480614 PCDHA3Q9Y5H8 950 aa9.72□□□□□ -0.85
VEGFA-212ENST00000480614 LRRC14BA6NHZ5 514 aa9.72□□□□□ -0.85
VEGFA-212ENST00000480614 KLHL18O94889 574 aa9.72□□□□□ -0.85
VEGFA-212ENST00000480614 ADIGQ0VDE8 80 aa9.72□□□□□ -0.85
VEGFA-212ENST00000480614 XRCC4Q13426 336 aa9.72□□□□□ -0.85
VEGFA-212ENST00000480614 OVOS1Q6IE37 1185 aa9.72□□□□□ -0.85
VEGFA-212ENST00000480614 NT5DC3Q86UY8 548 aa9.72□□□□□ -0.85
VEGFA-212ENST00000480614 AHI1Q8N157 1196 aa9.72□□□□□ -0.85
VEGFA-212ENST00000480614 RXFP2Q8WXD0 754 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms