RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 SEMA5AQ13591 1074 aa7.53□□□□□ -1.2
SSXP3-201ENST00000442971 ERV3-1Q14264 604 aa7.53□□□□□ -1.2
SSXP3-201ENST00000442971 ARHGAP44Q17R89 818 aa7.53□□□□□ -1.2
SSXP3-201ENST00000442971 ZNF568Q3ZCX4 644 aa7.53□□□□□ -1.2
SSXP3-201ENST00000442971 KMT5BQ4FZB7 885 aa7.53□□□□□ -1.2
SSXP3-201ENST00000442971 EFHC2Q5JST6 749 aa7.53□□□□□ -1.2
SSXP3-201ENST00000442971 PHF19Q5T6S3 580 aa7.53□□□□□ -1.2
SSXP3-201ENST00000442971 TMEM215Q68D42 235 aa7.53□□□□□ -1.2
SSXP3-201ENST00000442971 HMBOX1Q6NT76 420 aa7.53□□□□□ -1.2
SSXP3-201ENST00000442971 MAEAQ7L5Y9 396 aa7.53□□□□□ -1.2
SSXP3-201ENST00000442971 TMEM135Q86UB9 458 aa7.53□□□□□ -1.2
SSXP3-201ENST00000442971 RBMXL3Q8N7X1 1067 aaKnown RBP7.53□□□□□ -1.2
SSXP3-201ENST00000442971 OR6B3Q8NGW1 331 aa7.53□□□□□ -1.2
SSXP3-201ENST00000442971 UBE2Q2Q8WVN8 375 aa7.53□□□□□ -1.2
SSXP3-201ENST00000442971 CCDC74AQ96AQ1 378 aa7.53□□□□□ -1.2
SSXP3-201ENST00000442971 PIWIL1Q96J94 861 aaKnown RBP7.53□□□□□ -1.2
SSXP3-201ENST00000442971 SPOCK3Q9BQ16 436 aa7.53□□□□□ -1.2
SSXP3-201ENST00000442971 IRX2Q9BZI1 471 aaPredicted RBP7.53□□□□□ -1.2
SSXP3-201ENST00000442971 SPRTNQ9H040 489 aaPredicted RBP7.53□□□□□ -1.2
SSXP3-201ENST00000442971 RSPH9Q9H1X1 276 aaPredicted RBP7.53□□□□□ -1.2
SSXP3-201ENST00000442971 RCOR3Q9P2K3 495 aaPredicted RBP7.53□□□□□ -1.2
SSXP3-201ENST00000442971 COPG1Q9Y678 874 aaKnown RBP7.53□□□□□ -1.2
SSXP3-201ENST00000442971 SVEP1Q4LDE5 3571 aa7.53□□□□□ -1.2
SSXP3-201ENST00000442971 INPP4BO15327 924 aa7.52□□□□□ -1.2
SSXP3-201ENST00000442971 GPR37O15354 613 aa7.52□□□□□ -1.2
SSXP3-201ENST00000442971 COCHO43405 550 aa7.52□□□□□ -1.2
SSXP3-201ENST00000442971 REC8O95072 547 aa7.52□□□□□ -1.2
SSXP3-201ENST00000442971 MAP3K6O95382 1288 aa7.52□□□□□ -1.2
SSXP3-201ENST00000442971 FGF3P11487 239 aaPredicted RBP7.52□□□□□ -1.2
SSXP3-201ENST00000442971 RXRAP19793 462 aa7.52□□□□□ -1.2
SSXP3-201ENST00000442971 PROZP22891 400 aa7.52□□□□□ -1.2
SSXP3-201ENST00000442971 MCM5P33992 734 aa7.52□□□□□ -1.2
SSXP3-201ENST00000442971 GUCY2FP51841 1108 aa7.52□□□□□ -1.2
SSXP3-201ENST00000442971 MFAP1P55081 439 aaKnown RBP7.52□□□□□ -1.2
SSXP3-201ENST00000442971 EHHADHQ08426 723 aa7.52□□□□□ -1.2
SSXP3-201ENST00000442971 ABHD18Q0P651 414 aa7.52□□□□□ -1.2
SSXP3-201ENST00000442971 TRDNQ13061 729 aa7.52□□□□□ -1.2
SSXP3-201ENST00000442971 PDIA5Q14554 519 aa7.52□□□□□ -1.2
SSXP3-201ENST00000442971 LBRQ14739 615 aaKnown RBP7.52□□□□□ -1.2
SSXP3-201ENST00000442971 ZBTB6Q15916 424 aa7.52□□□□□ -1.2
SSXP3-201ENST00000442971 ENOX2Q16206 610 aaKnown RBP7.52□□□□□ -1.2
SSXP3-201ENST00000442971 PLEKHN1Q494U1 663 aaPredicted RBP7.52□□□□□ -1.2
SSXP3-201ENST00000442971 WSCD1Q658N2 575 aa7.52□□□□□ -1.2
SSXP3-201ENST00000442971 DENND5BQ6ZUT9 1274 aa7.52□□□□□ -1.2
SSXP3-201ENST00000442971 HTR3DQ70Z44 454 aa7.52□□□□□ -1.2
SSXP3-201ENST00000442971 CNTRLQ7Z7A1 2325 aa7.52□□□□□ -1.2
SSXP3-201ENST00000442971 ULK2Q8IYT8 1036 aa7.52□□□□□ -1.2
SSXP3-201ENST00000442971 REXO1Q8N1G1 1221 aaKnown RBP7.52□□□□□ -1.2
SSXP3-201ENST00000442971 OR13H1Q8NG92 308 aa7.52□□□□□ -1.2
SSXP3-201ENST00000442971 RELTQ969Z4 430 aa7.52□□□□□ -1.2
SSXP3-201ENST00000442971 EVI5LQ96CN4 794 aa7.52□□□□□ -1.2
SSXP3-201ENST00000442971 SPATA17Q96L03 361 aa7.52□□□□□ -1.2
SSXP3-201ENST00000442971 TTLL2Q9BWV7 592 aa7.52□□□□□ -1.2
SSXP3-201ENST00000442971 ZSWIM4Q9H7M6 989 aa7.52□□□□□ -1.2
SSXP3-201ENST00000442971 BARHL2Q9NY43 387 aa7.52□□□□□ -1.2
SSXP3-201ENST00000442971 RGL1Q9NZL6 768 aa7.52□□□□□ -1.2
SSXP3-201ENST00000442971 EHD2Q9NZN4 543 aa7.52□□□□□ -1.2
SSXP3-201ENST00000442971 TNFRSF10DQ9UBN6 386 aa7.52□□□□□ -1.2
SSXP3-201ENST00000442971 CYTH4Q9UIA0 394 aa7.52□□□□□ -1.2
SSXP3-201ENST00000442971 UBQLN1Q9UMX0 589 aaKnown RBP7.52□□□□□ -1.2
SSXP3-201ENST00000442971 PCDHGB7Q9Y5F8 929 aa7.52□□□□□ -1.2
SSXP3-201ENST00000442971 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.52□□□□□ -1.2
SSXP3-201ENST00000442971 RNF215Q9Y6U7 377 aa7.52□□□□□ -1.2
SSXP3-201ENST00000442971 CHD3Q12873 2000 aaKnown RBP7.52□□□□□ -1.21
SSXP3-201ENST00000442971 hCG_1984214I3L0E3 225 aa7.52□□□□□ -1.21
SSXP3-201ENST00000442971 CYB561D2O14569 222 aa7.52□□□□□ -1.21
SSXP3-201ENST00000442971 GREM1O60565 184 aa7.52□□□□□ -1.21
SSXP3-201ENST00000442971 CSF2P04141 144 aa7.52□□□□□ -1.21
SSXP3-201ENST00000442971 GGCXP38435 758 aa7.52□□□□□ -1.21
SSXP3-201ENST00000442971 STAT1P42224 750 aa7.52□□□□□ -1.21
SSXP3-201ENST00000442971 PPP2R5CQ13362 524 aa7.52□□□□□ -1.21
SSXP3-201ENST00000442971 CTTNQ14247 550 aaKnown RBP7.52□□□□□ -1.21
SSXP3-201ENST00000442971 CST6Q15828 149 aa7.52□□□□□ -1.21
SSXP3-201ENST00000442971 Q4G0T1 1027 aa7.52□□□□□ -1.21
SSXP3-201ENST00000442971 CFAP221Q4G0U5 840 aa7.52□□□□□ -1.21
SSXP3-201ENST00000442971 ESRP1Q6NXG1 681 aaKnown RBP7.52□□□□□ -1.21
SSXP3-201ENST00000442971 PODNL1Q6PEZ8 512 aa7.52□□□□□ -1.21
SSXP3-201ENST00000442971 TMTC3Q6ZXV5 915 aa7.52□□□□□ -1.21
SSXP3-201ENST00000442971 SND1Q7KZF4 910 aaKnown RBP eCLIP7.52□□□□□ -1.21
SSXP3-201ENST00000442971 KDELC2Q7Z4H8 507 aa7.52□□□□□ -1.21
SSXP3-201ENST00000442971 SLITRK4Q8IW52 837 aa7.52□□□□□ -1.21
SSXP3-201ENST00000442971 ZNF713Q8N859 430 aaPredicted RBP7.52□□□□□ -1.21
SSXP3-201ENST00000442971 WFDC11Q8NEX6 87 aa7.52□□□□□ -1.21
SSXP3-201ENST00000442971 DEPTORQ8TB45 409 aa7.52□□□□□ -1.21
SSXP3-201ENST00000442971 IGDCC4Q8TDY8 1250 aa7.52□□□□□ -1.21
SSXP3-201ENST00000442971 LMX1AQ8TE12 382 aa7.52□□□□□ -1.21
SSXP3-201ENST00000442971 DDA1Q9BW61 102 aa7.52□□□□□ -1.21
SSXP3-201ENST00000442971 PLA2G12AQ9BZM1 189 aa7.52□□□□□ -1.21
SSXP3-201ENST00000442971 SLKQ9H2G2 1235 aaPredicted RBP7.52□□□□□ -1.21
SSXP3-201ENST00000442971 PLA2G4CQ9UP65 541 aa7.52□□□□□ -1.21
SSXP3-201ENST00000442971 TCHHQ07283 1943 aa7.51□□□□□ -1.21
SSXP3-201ENST00000442971 CACNA1CQ13936 2221 aa7.51□□□□□ -1.21
SSXP3-201ENST00000442971 FRMD3A2A2Y4 597 aa7.51□□□□□ -1.21
SSXP3-201ENST00000442971 CDC14CA4D256 554 aa7.51□□□□□ -1.21
SSXP3-201ENST00000442971 ACTN4O43707 911 aaKnown RBP7.51□□□□□ -1.21
SSXP3-201ENST00000442971 RNASEH1O60930 286 aaKnown RBP7.51□□□□□ -1.21
SSXP3-201ENST00000442971 RNGTTO60942 597 aaKnown RBP7.51□□□□□ -1.21
SSXP3-201ENST00000442971 MCF2P10911 925 aa7.51□□□□□ -1.21
SSXP3-201ENST00000442971 NME1P15531 152 aaKnown RBP7.51□□□□□ -1.21
SSXP3-201ENST00000442971 GOT1P17174 413 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms