RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 HTR3EA5X5Y0 456 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 C16orf96A6NNT2 1141 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 FAM171A2A8MVW0 826 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 KIF28PB7ZC32 967 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 E9PMD0 336 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 STMND1H3BQB6 276 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 H7C0S8 307 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 EBAG9O00559 213 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 RANBP6O60518 1105 aaKnown RBP3.02□□□□□ -1.93
PMS1-209ENST00000424059 CBFA2T3O75081 653 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 TACC1O75410 805 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 RPS6KA5O75582 802 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 SLC22A3O75751 556 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 DDX58O95786 925 aaKnown RBP3.02□□□□□ -1.93
PMS1-209ENST00000424059 ALDH2P05091 517 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 ASGR1P07306 291 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 ALADP13716 330 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 HDCP19113 662 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 PRKACBP22694 351 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 SFPQP23246 707 aaKnown RBP eCLIP3.02□□□□□ -1.93
PMS1-209ENST00000424059 HOXA6P31267 233 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 GUCY1A2P33402 732 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 SREBF1P36956 1147 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 CCT6AP40227 531 aaKnown RBP3.02□□□□□ -1.93
PMS1-209ENST00000424059 CBX5P45973 191 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 IFNAR2P48551 515 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 TKTL1P51854 596 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 EIF4A1P60842 406 aaKnown RBP3.02□□□□□ -1.93
PMS1-209ENST00000424059 RAP2BP61225 183 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 POLR2GP62487 172 aaKnown RBP eCLIP3.02□□□□□ -1.93
PMS1-209ENST00000424059 TUBA4AP68366 448 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 GSTO1P78417 241 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 SIM1P81133 766 aaPredicted RBP3.02□□□□□ -1.93
PMS1-209ENST00000424059 MRPS5P82675 430 aaKnown RBP3.02□□□□□ -1.93
PMS1-209ENST00000424059 TFAP4Q01664 338 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 TRIM14Q14142 442 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 GRM3Q14832 879 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 NAA25Q14CX7 972 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 PDCD1Q15116 288 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 ADRM1Q16186 407 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 MEA1Q16626 185 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 CCDC57Q2TAC2 916 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 CCDC153Q494R4 210 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 CFAP157Q5JU67 520 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 WDR73Q6P4I2 378 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 C11orf88Q6PI97 169 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 SLC2A7Q6PXP3 512 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 RANBP10Q6VN20 620 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 KRTAP5-2Q701N4 177 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 STRA8Q7Z7C7 330 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 RNF180Q86T96 592 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 WDR49Q8IV35 697 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 SYCP3Q8IZU3 236 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 LNX2Q8N448 690 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 TOR1AIP2Q8NFQ8 470 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 LEO1Q8WVC0 666 aaPredicted RBP3.02□□□□□ -1.93
PMS1-209ENST00000424059 RUFY2Q8WXA3 655 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 HOXB13Q92826 284 aaPredicted RBP3.02□□□□□ -1.93
PMS1-209ENST00000424059 HDAC11Q96DB2 347 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 SLC47A1Q96FL8 570 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 ZNF845Q96IR2 970 aaPredicted RBP3.02□□□□□ -1.93
PMS1-209ENST00000424059 EGLN2Q96KS0 407 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 NUDCD1Q96RS6 583 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 ORAI2Q96SN7 254 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 SIN3AQ96ST3 1273 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 UHRF1Q96T88 793 aaPredicted RBP3.02□□□□□ -1.93
PMS1-209ENST00000424059 TTC1Q99614 292 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 SPZ1Q9BXG8 430 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 ACPTQ9BZG2 426 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 INTS2Q9H0H0 1204 aaKnown RBP3.02□□□□□ -1.93
PMS1-209ENST00000424059 CCDC8Q9H0W5 538 aaPredicted RBP3.02□□□□□ -1.93
PMS1-209ENST00000424059 C2orf40Q9H1Z8 148 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 DCTPP1Q9H773 170 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 UCK1Q9HA47 277 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 ZNF277Q9NRM2 450 aaPredicted RBP3.02□□□□□ -1.93
PMS1-209ENST00000424059 PLSCR4Q9NRQ2 329 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 TMEM140Q9NV12 185 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 ATAD3AQ9NVI7 634 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.02□□□□□ -1.93
PMS1-209ENST00000424059 EHD3Q9NZN3 535 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 EHD2Q9NZN4 543 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 TBC1D14Q9P2M4 693 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 CHORDC1Q9UHD1 332 aaPredicted RBP3.02□□□□□ -1.93
PMS1-209ENST00000424059 DPP7Q9UHL4 492 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 BAG5Q9UL15 447 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 ZBTB21Q9ULJ3 1066 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 LIMCH1Q9UPQ0 1083 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 SATB2Q9UPW6 733 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 TMEM5Q9Y2B1 443 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 CRYL1Q9Y2S2 319 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 MED16Q9Y2X0 877 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 PCDHGB5Q9Y5G0 923 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 SESN1Q9Y6P5 492 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 RPAP1Q9BWH6 1393 aaPredicted RBP3.02□□□□□ -1.93
PMS1-209ENST00000424059 CCDC162PA2VCL2 907 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 GOLGA8MH3BSY2 632 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 POLR2DO15514 142 aaKnown RBP3.02□□□□□ -1.93
PMS1-209ENST00000424059 ADCY6O43306 1168 aa3.02□□□□□ -1.93
PMS1-209ENST00000424059 CCNT1O60563 726 aaKnown RBP3.02□□□□□ -1.93
PMS1-209ENST00000424059 GPANK1O95872 356 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms