RNA–Protein interactions for RNA: ENST00000399349.5

ITSN1-208, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,191 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-208ENST00000399349 AGAP11Q8TF27 550 aa13.42□□□□□ -0.26
ITSN1-208ENST00000399349 POMKQ9H5K3 350 aa13.42□□□□□ -0.26
ITSN1-208ENST00000399349 MPP6Q9NZW5 540 aa13.42□□□□□ -0.26
ITSN1-208ENST00000399349 CNOT3O75175 753 aaKnown RBP13.42□□□□□ -0.26
ITSN1-208ENST00000399349 ZCCHC9Q8N567 271 aaKnown RBP13.42□□□□□ -0.26
ITSN1-208ENST00000399349 SAMD3Q8N6K7 520 aa13.42□□□□□ -0.26
ITSN1-208ENST00000399349 LNX1Q8TBB1 728 aaPredicted RBP13.42□□□□□ -0.26
ITSN1-208ENST00000399349 MTFMTQ96DP5 389 aaKnown RBP13.42□□□□□ -0.26
ITSN1-208ENST00000399349 SH3GL1Q99961 368 aa13.42□□□□□ -0.26
ITSN1-208ENST00000399349 RNPEPQ9H4A4 650 aa13.42□□□□□ -0.26
ITSN1-208ENST00000399349 SEMA4BQ9NPR2 832 aaPredicted RBP13.42□□□□□ -0.26
ITSN1-208ENST00000399349 CYP39A1Q9NYL5 469 aa13.42□□□□□ -0.26
ITSN1-208ENST00000399349 TMEM114B3SHH9 223 aa13.42□□□□□ -0.26
ITSN1-208ENST00000399349 HPGDP15428 266 aa13.42□□□□□ -0.26
ITSN1-208ENST00000399349 ME2P23368 584 aa13.42□□□□□ -0.26
ITSN1-208ENST00000399349 NRF1Q16656 503 aa13.42□□□□□ -0.26
ITSN1-208ENST00000399349 MIIPQ5JXC2 388 aa13.42□□□□□ -0.26
ITSN1-208ENST00000399349 LRRC55Q6ZSA7 311 aa13.42□□□□□ -0.26
ITSN1-208ENST00000399349 IKZF4Q9H2S9 585 aa13.42□□□□□ -0.26
ITSN1-208ENST00000399349 TDRKHQ9Y2W6 561 aaKnown RBP13.42□□□□□ -0.26
ITSN1-208ENST00000399349 C1orf232A0A0U1RR37 186 aa13.41□□□□□ -0.26
ITSN1-208ENST00000399349 MOXD2PA6NHM9 499 aa13.41□□□□□ -0.26
ITSN1-208ENST00000399349 TPP1O14773 563 aa13.41□□□□□ -0.26
ITSN1-208ENST00000399349 KLRC4O43908 158 aa13.41□□□□□ -0.26
ITSN1-208ENST00000399349 ZNF862O60290 1169 aa13.41□□□□□ -0.26
ITSN1-208ENST00000399349 UBA1P22314 1058 aaKnown RBP13.41□□□□□ -0.26
ITSN1-208ENST00000399349 YWHAQP27348 245 aa13.41□□□□□ -0.26
ITSN1-208ENST00000399349 BFSP2Q13515 415 aa13.41□□□□□ -0.26
ITSN1-208ENST00000399349 ZSCAN32Q9NX65 697 aa13.41□□□□□ -0.26
ITSN1-208ENST00000399349 CAMSAP1Q5T5Y3 1602 aa13.41□□□□□ -0.26
ITSN1-208ENST00000399349 A0A0B4J269 797 aa13.41□□□□□ -0.26
ITSN1-208ENST00000399349 HS6ST1O60243 411 aa13.41□□□□□ -0.26
ITSN1-208ENST00000399349 TSPAN8P19075 237 aa13.41□□□□□ -0.26
ITSN1-208ENST00000399349 MAMLD1Q13495 774 aa13.41□□□□□ -0.26
ITSN1-208ENST00000399349 ATP1A4Q13733 1029 aa13.41□□□□□ -0.26
ITSN1-208ENST00000399349 TCEA2Q15560 299 aa13.41□□□□□ -0.26
ITSN1-208ENST00000399349 FAM98BQ52LJ0 330 aaKnown RBP13.41□□□□□ -0.26
ITSN1-208ENST00000399349 LRRC74BQ6ZQY2 392 aa13.41□□□□□ -0.26
ITSN1-208ENST00000399349 EFCAB3Q8N7B9 438 aa13.41□□□□□ -0.26
ITSN1-208ENST00000399349 TMEM159Q96B96 161 aa13.41□□□□□ -0.26
ITSN1-208ENST00000399349 CPNE1Q99829 537 aa13.41□□□□□ -0.26
ITSN1-208ENST00000399349 ETNK2Q9NVF9 386 aa13.41□□□□□ -0.26
ITSN1-208ENST00000399349 COMMD8Q9NX08 183 aa13.41□□□□□ -0.26
ITSN1-208ENST00000399349 E7ENQ6 273 aa13.41□□□□□ -0.26
ITSN1-208ENST00000399349 ATG7O95352 703 aa13.41□□□□□ -0.26
ITSN1-208ENST00000399349 NFICP08651 508 aa13.41□□□□□ -0.26
ITSN1-208ENST00000399349 PAEPP09466 180 aa13.41□□□□□ -0.26
ITSN1-208ENST00000399349 RPL7AP62424 266 aaKnown RBP13.41□□□□□ -0.26
ITSN1-208ENST00000399349 TRIM25Q14258 630 aaKnown RBP13.41□□□□□ -0.26
ITSN1-208ENST00000399349 MFSD10Q14728 455 aa13.41□□□□□ -0.26
ITSN1-208ENST00000399349 MILR1Q7Z6M3 343 aa13.41□□□□□ -0.26
ITSN1-208ENST00000399349 VPS33AQ96AX1 596 aa13.41□□□□□ -0.26
ITSN1-208ENST00000399349 SERAC1Q96JX3 654 aa13.41□□□□□ -0.26
ITSN1-208ENST00000399349 SENP8Q96LD8 212 aa13.41□□□□□ -0.26
ITSN1-208ENST00000399349 FBXO44Q9H4M3 255 aa13.41□□□□□ -0.26
ITSN1-208ENST00000399349 POPDC2Q9HBU9 364 aa13.41□□□□□ -0.26
ITSN1-208ENST00000399349 NDUFA13Q9P0J0 144 aa13.41□□□□□ -0.26
ITSN1-208ENST00000399349 COPG1Q9Y678 874 aaKnown RBP13.41□□□□□ -0.26
ITSN1-208ENST00000399349 AGRPO00253 132 aa13.41□□□□□ -0.26
ITSN1-208ENST00000399349 TNFSF9P41273 254 aa13.41□□□□□ -0.26
ITSN1-208ENST00000399349 NPY2RP49146 381 aa13.41□□□□□ -0.26
ITSN1-208ENST00000399349 CDK16Q00536 496 aa13.41□□□□□ -0.26
ITSN1-208ENST00000399349 IL17AQ16552 155 aa13.41□□□□□ -0.26
ITSN1-208ENST00000399349 WSCD1Q658N2 575 aa13.41□□□□□ -0.26
ITSN1-208ENST00000399349 FAM228AQ86W67 206 aa13.41□□□□□ -0.26
ITSN1-208ENST00000399349 KATNAL2Q8IYT4 538 aa13.41□□□□□ -0.26
ITSN1-208ENST00000399349 DNAJC19Q96DA6 116 aa13.41□□□□□ -0.26
ITSN1-208ENST00000399349 TBL1YQ9BQ87 522 aa13.41□□□□□ -0.26
ITSN1-208ENST00000399349 GANQ9H2C0 597 aa13.41□□□□□ -0.26
ITSN1-208ENST00000399349 OR12D3Q9UGF7 316 aa13.41□□□□□ -0.26
ITSN1-208ENST00000399349 SPACA6W5XKT8 324 aa13.41□□□□□ -0.26
ITSN1-208ENST00000399349 ASTN1O14525 1302 aa13.4□□□□□ -0.26
ITSN1-208ENST00000399349 CCDC154A6NI56 674 aa13.4□□□□□ -0.26
ITSN1-208ENST00000399349 MEIS2O14770 477 aa13.4□□□□□ -0.26
ITSN1-208ENST00000399349 ZNF7P17097 686 aaPredicted RBP13.4□□□□□ -0.26
ITSN1-208ENST00000399349 MSH3P20585 1137 aa13.4□□□□□ -0.26
ITSN1-208ENST00000399349 SLC25A3Q00325 362 aa13.4□□□□□ -0.26
ITSN1-208ENST00000399349 NCF4Q15080 339 aa13.4□□□□□ -0.26
ITSN1-208ENST00000399349 SPANXN3Q5MJ09 141 aa13.4□□□□□ -0.26
ITSN1-208ENST00000399349 SERPINB11Q96P15 392 aa13.4□□□□□ -0.26
ITSN1-208ENST00000399349 ABHD16BQ9H3Z7 469 aa13.4□□□□□ -0.26
ITSN1-208ENST00000399349 ALG9Q9H6U8 611 aa13.4□□□□□ -0.26
ITSN1-208ENST00000399349 WNT7AO00755 349 aa13.4□□□□□ -0.26
ITSN1-208ENST00000399349 RNASEH1O60930 286 aaKnown RBP13.4□□□□□ -0.26
ITSN1-208ENST00000399349 TSC22D2O75157 780 aa13.4□□□□□ -0.26
ITSN1-208ENST00000399349 GJB1P08034 283 aa13.4□□□□□ -0.26
ITSN1-208ENST00000399349 SOX6P35712 828 aa13.4□□□□□ -0.26
ITSN1-208ENST00000399349 NR2C2P49116 596 aa13.4□□□□□ -0.26
ITSN1-208ENST00000399349 SCNN1GP51170 649 aa13.4□□□□□ -0.26
ITSN1-208ENST00000399349 DGKZQ13574 1117 aa13.4□□□□□ -0.26
ITSN1-208ENST00000399349 PFKFB4Q16877 469 aa13.4□□□□□ -0.26
ITSN1-208ENST00000399349 ZC3H12AQ5D1E8 599 aaKnown RBP13.4□□□□□ -0.26
ITSN1-208ENST00000399349 NEPROQ6NW34 567 aa13.4□□□□□ -0.26
ITSN1-208ENST00000399349 UNC5AQ6ZN44 842 aa13.4□□□□□ -0.26
ITSN1-208ENST00000399349 TPGS1Q6ZTW0 290 aa13.4□□□□□ -0.26
ITSN1-208ENST00000399349 CLVS1Q8IUQ0 354 aaPredicted RBP13.4□□□□□ -0.26
ITSN1-208ENST00000399349 RMND5BQ96G75 393 aaPredicted RBP13.4□□□□□ -0.26
ITSN1-208ENST00000399349 WDR18Q9BV38 432 aa13.4□□□□□ -0.26
ITSN1-208ENST00000399349 CLTCQ00610 1675 aaKnown RBP13.4□□□□□ -0.26
ITSN1-208ENST00000399349 HOXA2O43364 376 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms