RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 PHKG1Q16816 387 aa19.31■□□□□ 0.68
HOXC6-202ENST00000394331 MBLAC2Q68D91 279 aa19.31■□□□□ 0.68
HOXC6-202ENST00000394331 BRSK2Q8IWQ3 736 aa19.31■□□□□ 0.68
HOXC6-202ENST00000394331 UBR7Q8N806 425 aa19.31■□□□□ 0.68
HOXC6-202ENST00000394331 RLFQ13129 1914 aa19.3■□□□□ 0.68
HOXC6-202ENST00000394331 KBTBD13C9JR72 458 aa19.3■□□□□ 0.68
HOXC6-202ENST00000394331 CYB561D2O14569 222 aa19.3■□□□□ 0.68
HOXC6-202ENST00000394331 CTBSQ01459 385 aa19.3■□□□□ 0.68
HOXC6-202ENST00000394331 PIGGQ5H8A4 983 aa19.3■□□□□ 0.68
HOXC6-202ENST00000394331 OGFOD2Q6N063 350 aa19.3■□□□□ 0.68
HOXC6-202ENST00000394331 FRA10AC1Q70Z53 315 aa19.3■□□□□ 0.68
HOXC6-202ENST00000394331 WDR49Q8IV35 697 aa19.3■□□□□ 0.68
HOXC6-202ENST00000394331 GALNT4Q8N4A0 578 aa19.3■□□□□ 0.68
HOXC6-202ENST00000394331 GSDMBQ8TAX9 411 aa19.3■□□□□ 0.68
HOXC6-202ENST00000394331 PTCD2Q8WV60 388 aaKnown RBP19.3■□□□□ 0.68
HOXC6-202ENST00000394331 DDX56Q9NY93 547 aaKnown RBP19.3■□□□□ 0.68
HOXC6-202ENST00000394331 TTLL3Q9Y4R7 772 aa19.3■□□□□ 0.68
HOXC6-202ENST00000394331 TMEM191CA6NGB0 347 aa19.3■□□□□ 0.68
HOXC6-202ENST00000394331 TRDMT1O14717 391 aaKnown RBP19.3■□□□□ 0.68
HOXC6-202ENST00000394331 ASS1P00966 412 aaKnown RBP19.3■□□□□ 0.68
HOXC6-202ENST00000394331 TMEM191BP0C7N4 346 aa19.3■□□□□ 0.68
HOXC6-202ENST00000394331 NAT1P18440 290 aa19.3■□□□□ 0.68
HOXC6-202ENST00000394331 RPL22P35268 128 aaKnown RBP19.3■□□□□ 0.68
HOXC6-202ENST00000394331 EFNA5P52803 228 aa19.3■□□□□ 0.68
HOXC6-202ENST00000394331 TARBP2Q15633 366 aaKnown RBP19.3■□□□□ 0.68
HOXC6-202ENST00000394331 EGFLAMQ63HQ2 1017 aa19.3■□□□□ 0.68
HOXC6-202ENST00000394331 LYSMD3Q7Z3D4 306 aa19.3■□□□□ 0.68
HOXC6-202ENST00000394331 MAVSQ7Z434 540 aa19.3■□□□□ 0.68
HOXC6-202ENST00000394331 FIBCD1Q8N539 461 aa19.3■□□□□ 0.68
HOXC6-202ENST00000394331 ZNF641Q96N77 438 aaPredicted RBP19.3■□□□□ 0.68
HOXC6-202ENST00000394331 CAAP1Q9H8G2 361 aa19.3■□□□□ 0.68
HOXC6-202ENST00000394331 TMEM9Q9P0T7 183 aa19.3■□□□□ 0.68
HOXC6-202ENST00000394331 GPR25O00155 361 aa19.29■□□□□ 0.68
HOXC6-202ENST00000394331 KPNA4O00629 521 aaPredicted RBP19.29■□□□□ 0.68
HOXC6-202ENST00000394331 NDUFB5O43674 189 aa19.29■□□□□ 0.68
HOXC6-202ENST00000394331 STAMBPO95630 424 aa19.29■□□□□ 0.68
HOXC6-202ENST00000394331 PRKCHP24723 683 aa19.29■□□□□ 0.68
HOXC6-202ENST00000394331 GABRB3P28472 473 aa19.29■□□□□ 0.68
HOXC6-202ENST00000394331 SSTR3P32745 418 aaPredicted RBP19.29■□□□□ 0.68
HOXC6-202ENST00000394331 GSSP48637 474 aa19.29■□□□□ 0.68
HOXC6-202ENST00000394331 CAPSQ13938 189 aa19.29■□□□□ 0.68
HOXC6-202ENST00000394331 ARL13BQ3SXY8 428 aa19.29■□□□□ 0.68
HOXC6-202ENST00000394331 MGAT5BQ3V5L5 792 aa19.29■□□□□ 0.68
HOXC6-202ENST00000394331 ZFYVE27Q5T4F4 411 aa19.29■□□□□ 0.68
HOXC6-202ENST00000394331 C16orf46Q6P387 395 aa19.29■□□□□ 0.68
HOXC6-202ENST00000394331 IGDCC3Q8IVU1 814 aa19.29■□□□□ 0.68
HOXC6-202ENST00000394331 MINDY2Q8NBR6 621 aa19.29■□□□□ 0.68
HOXC6-202ENST00000394331 COL11A1P12107 1806 aaPredicted RBP19.29■□□□□ 0.68
HOXC6-202ENST00000394331 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.29■□□□□ 0.68
HOXC6-202ENST00000394331 TMEM114B3SHH9 223 aa19.29■□□□□ 0.68
HOXC6-202ENST00000394331 PI4K2BG5E9Z4 385 aa19.29■□□□□ 0.68
HOXC6-202ENST00000394331 BCAS2O75934 225 aaPredicted RBP19.29■□□□□ 0.68
HOXC6-202ENST00000394331 CDKN2BP42772 138 aa19.29■□□□□ 0.68
HOXC6-202ENST00000394331 NUMBP49757 651 aa19.29■□□□□ 0.68
HOXC6-202ENST00000394331 TAP1Q03518 808 aa19.29■□□□□ 0.68
HOXC6-202ENST00000394331 ATP1A4Q13733 1029 aa19.29■□□□□ 0.68
HOXC6-202ENST00000394331 FAM160B1Q5W0V3 765 aa19.29■□□□□ 0.68
HOXC6-202ENST00000394331 SMYD5Q6GMV2 418 aa19.29■□□□□ 0.68
HOXC6-202ENST00000394331 KRT80Q6KB66 452 aa19.29■□□□□ 0.68
HOXC6-202ENST00000394331 TMEM35BQ8NCS4 154 aa19.29■□□□□ 0.68
HOXC6-202ENST00000394331 KLRG1Q96E93 195 aa19.29■□□□□ 0.68
HOXC6-202ENST00000394331 OTUD5Q96G74 571 aa19.29■□□□□ 0.68
HOXC6-202ENST00000394331 CNDP2Q96KP4 475 aaKnown RBP19.29■□□□□ 0.68
HOXC6-202ENST00000394331 ZNF518BQ9C0D4 1074 aa19.29■□□□□ 0.68
HOXC6-202ENST00000394331 C7orf72A4D263 438 aa19.28■□□□□ 0.68
HOXC6-202ENST00000394331 H3BMQ9 156 aa19.28■□□□□ 0.68
HOXC6-202ENST00000394331 ZNF195O14628 629 aa19.28■□□□□ 0.68
HOXC6-202ENST00000394331 SNAP91O60641 907 aa19.28■□□□□ 0.68
HOXC6-202ENST00000394331 ATE1O95260 518 aa19.28■□□□□ 0.68
HOXC6-202ENST00000394331 GABRB2P47870 512 aa19.28■□□□□ 0.68
HOXC6-202ENST00000394331 DNAJC24Q6P3W2 148 aa19.28■□□□□ 0.68
HOXC6-202ENST00000394331 CYP2U1Q7Z449 544 aa19.28■□□□□ 0.68
HOXC6-202ENST00000394331 SREK1Q8WXA9 508 aaKnown RBP19.28■□□□□ 0.68
HOXC6-202ENST00000394331 COG8Q96MW5 612 aa19.28■□□□□ 0.68
HOXC6-202ENST00000394331 DCUN1D5Q9BTE7 237 aa19.28■□□□□ 0.68
HOXC6-202ENST00000394331 TOM1L1O75674 476 aa19.28■□□□□ 0.68
HOXC6-202ENST00000394331 SLC1A6P48664 564 aa19.28■□□□□ 0.68
HOXC6-202ENST00000394331 STAT5BP51692 787 aa19.28■□□□□ 0.68
HOXC6-202ENST00000394331 RPL7AP62424 266 aaKnown RBP19.28■□□□□ 0.68
HOXC6-202ENST00000394331 GALNT2Q10471 571 aa19.28■□□□□ 0.68
HOXC6-202ENST00000394331 SURF1Q15526 300 aa19.28■□□□□ 0.68
HOXC6-202ENST00000394331 PRAMEF18Q5VWM3 479 aa19.28■□□□□ 0.68
HOXC6-202ENST00000394331 BNC2Q6ZN30 1099 aaPredicted RBP19.28■□□□□ 0.68
HOXC6-202ENST00000394331 TIFABQ6ZNK6 161 aa19.28■□□□□ 0.68
HOXC6-202ENST00000394331 PDCD6IPQ8WUM4 868 aaKnown RBP19.28■□□□□ 0.68
HOXC6-202ENST00000394331 MRPL4Q9BYD3 311 aaKnown RBP19.28■□□□□ 0.68
HOXC6-202ENST00000394331 FRMD8Q9BZ67 464 aaPredicted RBP19.28■□□□□ 0.68
HOXC6-202ENST00000394331 TCRBV7S3A2A0A539 114 aa19.28■□□□□ 0.68
HOXC6-202ENST00000394331 CFAP99D6REC4 459 aa19.28■□□□□ 0.68
HOXC6-202ENST00000394331 EDN1P05305 212 aa19.28■□□□□ 0.68
HOXC6-202ENST00000394331 PROZP22891 400 aa19.28■□□□□ 0.68
HOXC6-202ENST00000394331 CNTN2Q02246 1040 aa19.28■□□□□ 0.68
HOXC6-202ENST00000394331 KLF10Q13118 480 aa19.28■□□□□ 0.68
HOXC6-202ENST00000394331 TMEM214Q6NUQ4 689 aaKnown RBP19.28■□□□□ 0.68
HOXC6-202ENST00000394331 EFCAB3Q8N7B9 438 aa19.28■□□□□ 0.68
HOXC6-202ENST00000394331 TNIP2Q8NFZ5 429 aa19.28■□□□□ 0.68
HOXC6-202ENST00000394331 KLHL3Q9UH77 587 aa19.28■□□□□ 0.68
HOXC6-202ENST00000394331 MYH9P35579 1960 aaKnown RBP19.27■□□□□ 0.68
HOXC6-202ENST00000394331 MAFO75444 373 aaPredicted RBP19.27■□□□□ 0.68
HOXC6-202ENST00000394331 GSRP00390 522 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms