RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 KRBA1A5PL33 1030 aa16.5■□□□□ 0.23
CLN6-216ENST00000636876 SRGAP2O75044 1071 aa16.5■□□□□ 0.23
CLN6-216ENST00000636876 LRIG2O94898 1065 aa16.5■□□□□ 0.23
CLN6-216ENST00000636876 OPRD1P41143 372 aa16.5■□□□□ 0.23
CLN6-216ENST00000636876 EIF2DP41214 584 aaKnown RBP16.5■□□□□ 0.23
CLN6-216ENST00000636876 IRAK1P51617 712 aa16.5■□□□□ 0.23
CLN6-216ENST00000636876 PRKCQQ04759 706 aa16.5■□□□□ 0.23
CLN6-216ENST00000636876 DPYSL2Q16555 572 aa16.5■□□□□ 0.23
CLN6-216ENST00000636876 TMEM31Q5JXX7 168 aa16.5■□□□□ 0.23
CLN6-216ENST00000636876 NAIF1Q69YI7 327 aaPredicted RBP16.5■□□□□ 0.23
CLN6-216ENST00000636876 TPRG1Q6ZUI0 275 aa16.5■□□□□ 0.23
CLN6-216ENST00000636876 C12orf40Q86WS4 652 aa16.5■□□□□ 0.23
CLN6-216ENST00000636876 CIR1Q86X95 450 aaPredicted RBP16.5■□□□□ 0.23
CLN6-216ENST00000636876 REXO1L1PQ8IX06 675 aa16.5■□□□□ 0.23
CLN6-216ENST00000636876 NAT16Q8N8M0 369 aa16.5■□□□□ 0.23
CLN6-216ENST00000636876 TBC1D31Q96DN5 1066 aa16.5■□□□□ 0.23
CLN6-216ENST00000636876 XPO6Q96QU8 1125 aaKnown RBP16.5■□□□□ 0.23
CLN6-216ENST00000636876 EPAS1Q99814 870 aa16.5■□□□□ 0.23
CLN6-216ENST00000636876 PPARGC1AQ9UBK2 798 aaKnown RBP16.5■□□□□ 0.23
CLN6-216ENST00000636876 FBXO10Q9UK96 956 aa16.5■□□□□ 0.23
CLN6-216ENST00000636876 NEU3Q9UQ49 428 aa16.5■□□□□ 0.23
CLN6-216ENST00000636876 CAPN6Q9Y6Q1 641 aa16.5■□□□□ 0.23
CLN6-216ENST00000636876 A0A1B0GVM2 712 aa16.49■□□□□ 0.23
CLN6-216ENST00000636876 TCAF2A6NFQ2 919 aa16.49■□□□□ 0.23
CLN6-216ENST00000636876 SHISA7A6NL88 538 aa16.49■□□□□ 0.23
CLN6-216ENST00000636876 CREB3O43889 395 aa16.49■□□□□ 0.23
CLN6-216ENST00000636876 TULP3O75386 442 aa16.49■□□□□ 0.23
CLN6-216ENST00000636876 PALMO75781 387 aa16.49■□□□□ 0.23
CLN6-216ENST00000636876 CNTN5O94779 1100 aa16.49■□□□□ 0.23
CLN6-216ENST00000636876 ALADP13716 330 aa16.49■□□□□ 0.23
CLN6-216ENST00000636876 HOXC13P31276 330 aa16.49■□□□□ 0.23
CLN6-216ENST00000636876 HTR7P34969 479 aa16.49■□□□□ 0.23
CLN6-216ENST00000636876 SLC6A11P48066 632 aa16.49■□□□□ 0.23
CLN6-216ENST00000636876 ZNF135P52742 658 aaPredicted RBP16.49■□□□□ 0.23
CLN6-216ENST00000636876 SIGLEC14Q08ET2 396 aa16.49■□□□□ 0.23
CLN6-216ENST00000636876 ATP13A4Q4VNC1 1196 aa16.49■□□□□ 0.23
CLN6-216ENST00000636876 PPP6R3Q5H9R7 873 aaPredicted RBP16.49■□□□□ 0.23
CLN6-216ENST00000636876 RWDD4Q6NW29 188 aaKnown RBP16.49■□□□□ 0.23
CLN6-216ENST00000636876 C1orf228Q6PIY5 440 aa16.49■□□□□ 0.23
CLN6-216ENST00000636876 TXNDC11Q6PKC3 985 aa16.49■□□□□ 0.23
CLN6-216ENST00000636876 CHST9Q7L1S5 443 aa16.49■□□□□ 0.23
CLN6-216ENST00000636876 RHOT1Q8IXI2 618 aa16.49■□□□□ 0.23
CLN6-216ENST00000636876 SYCE1Q8N0S2 351 aa16.49■□□□□ 0.23
CLN6-216ENST00000636876 CCAR2Q8N163 923 aaKnown RBP16.49■□□□□ 0.23
CLN6-216ENST00000636876 SIX5Q8N196 739 aa16.49■□□□□ 0.23
CLN6-216ENST00000636876 CD101Q93033 1021 aa16.49■□□□□ 0.23
CLN6-216ENST00000636876 SLC2A11Q9BYW1 496 aa16.49■□□□□ 0.23
CLN6-216ENST00000636876 PCDH18Q9HCL0 1135 aa16.49■□□□□ 0.23
CLN6-216ENST00000636876 DNAJC17Q9NVM6 304 aaKnown RBP16.49■□□□□ 0.23
CLN6-216ENST00000636876 DOCK4Q8N1I0 1966 aa16.49■□□□□ 0.23
CLN6-216ENST00000636876 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.48■□□□□ 0.23
CLN6-216ENST00000636876 MAN2B1O00754 1011 aa16.48■□□□□ 0.23
CLN6-216ENST00000636876 PSTPIP1O43586 416 aa16.48■□□□□ 0.23
CLN6-216ENST00000636876 CLDN11O75508 207 aa16.48■□□□□ 0.23
CLN6-216ENST00000636876 LUC7L3O95232 432 aaKnown RBP16.48■□□□□ 0.23
CLN6-216ENST00000636876 TNNT1P13805 278 aa16.48■□□□□ 0.23
CLN6-216ENST00000636876 EPHB2P29323 1055 aa16.48■□□□□ 0.23
CLN6-216ENST00000636876 ARSEP51690 589 aa16.48■□□□□ 0.23
CLN6-216ENST00000636876 CDH4P55283 916 aa16.48■□□□□ 0.23
CLN6-216ENST00000636876 TPI1P60174 286 aa16.48■□□□□ 0.23
CLN6-216ENST00000636876 ALFQ53S48 1182 aa16.48■□□□□ 0.23
CLN6-216ENST00000636876 ASTLQ6HA08 431 aaPredicted RBP16.48■□□□□ 0.23
CLN6-216ENST00000636876 GRAMD4Q6IC98 578 aa16.48■□□□□ 0.23
CLN6-216ENST00000636876 NT5DC3Q86UY8 548 aa16.48■□□□□ 0.23
CLN6-216ENST00000636876 CARNMT1Q8N4J0 409 aa16.48■□□□□ 0.23
CLN6-216ENST00000636876 ZNF557Q8N988 423 aaPredicted RBP16.48■□□□□ 0.23
CLN6-216ENST00000636876 FAM71BQ8TC56 605 aa16.48■□□□□ 0.23
CLN6-216ENST00000636876 WFDC5Q8TCV5 224 aa16.48■□□□□ 0.23
CLN6-216ENST00000636876 EXOC4Q96A65 974 aa16.48■□□□□ 0.23
CLN6-216ENST00000636876 SHDQ96IW2 340 aa16.48■□□□□ 0.23
CLN6-216ENST00000636876 P2RY13Q9BPV8 354 aa16.48■□□□□ 0.23
CLN6-216ENST00000636876 ZYG11BQ9C0D3 744 aa16.48■□□□□ 0.23
CLN6-216ENST00000636876 TRMT1Q9NXH9 659 aaKnown RBP16.48■□□□□ 0.23
CLN6-216ENST00000636876 MPP6Q9NZW5 540 aa16.48■□□□□ 0.23
CLN6-216ENST00000636876 DEC1Q9P2X7 70 aa16.48■□□□□ 0.23
CLN6-216ENST00000636876 CLEC4EQ9ULY5 219 aa16.48■□□□□ 0.23
CLN6-216ENST00000636876 TECTAO75443 2155 aa16.48■□□□□ 0.23
CLN6-216ENST00000636876 KIAA1549LQ6ZVL6 1849 aa16.47■□□□□ 0.23
CLN6-216ENST00000636876 MIA3Q5JRA6 1907 aa16.47■□□□□ 0.23
CLN6-216ENST00000636876 H3BRJ5 948 aa16.47■□□□□ 0.23
CLN6-216ENST00000636876 EEF2KO00418 725 aaKnown RBP16.47■□□□□ 0.23
CLN6-216ENST00000636876 TRIM24O15164 1050 aa16.47■□□□□ 0.23
CLN6-216ENST00000636876 FTCDO95954 541 aa16.47■□□□□ 0.23
CLN6-216ENST00000636876 CISD3P0C7P0 127 aa16.47■□□□□ 0.23
CLN6-216ENST00000636876 RHOQP17081 205 aa16.47■□□□□ 0.23
CLN6-216ENST00000636876 GOT1P17174 413 aa16.47■□□□□ 0.23
CLN6-216ENST00000636876 ARL4AP40617 200 aa16.47■□□□□ 0.23
CLN6-216ENST00000636876 HCAR3P49019 387 aa16.47■□□□□ 0.23
CLN6-216ENST00000636876 DGKGP49619 791 aa16.47■□□□□ 0.23
CLN6-216ENST00000636876 GALK1P51570 392 aa16.47■□□□□ 0.23
CLN6-216ENST00000636876 CDH6P55285 790 aa16.47■□□□□ 0.23
CLN6-216ENST00000636876 STARD6P59095 220 aa16.47■□□□□ 0.23
CLN6-216ENST00000636876 MESP2Q0VG99 397 aa16.47■□□□□ 0.23
CLN6-216ENST00000636876 CDH18Q13634 790 aa16.47■□□□□ 0.23
CLN6-216ENST00000636876 KRT81Q14533 505 aa16.47■□□□□ 0.23
CLN6-216ENST00000636876 PDK2Q15119 407 aa16.47■□□□□ 0.23
CLN6-216ENST00000636876 PON2Q15165 354 aa16.47■□□□□ 0.23
CLN6-216ENST00000636876 ZNF852Q6ZMS4 543 aa16.47■□□□□ 0.23
CLN6-216ENST00000636876 PEX26Q7Z412 305 aa16.47■□□□□ 0.23
CLN6-216ENST00000636876 TFAP2DQ7Z6R9 452 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms